RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 KLK12Q9UKR0 248 aa12.44□□□□□ -0.42
SNX11-201ENST00000359238 MEGF8Q7Z7M0 2845 aa12.44□□□□□ -0.42
SNX11-201ENST00000359238 DNAH1Q9P2D7 4330 aa12.44□□□□□ -0.42
SNX11-201ENST00000359238 ATP5EP56381 51 aaPredicted RBP12.43□□□□□ -0.42
SNX11-201ENST00000359238 M0R2N4 97 aa12.43□□□□□ -0.42
SNX11-201ENST00000359238 CHCHD10Q8WYQ3 142 aaPredicted RBP12.43□□□□□ -0.42
SNX11-201ENST00000359238 PDE6GP18545 87 aa12.42□□□□□ -0.42
SNX11-201ENST00000359238 C1orf43Q9BWL3 253 aa12.42□□□□□ -0.42
SNX11-201ENST00000359238 LAMTOR3Q9UHA4 124 aa12.42□□□□□ -0.42
SNX11-201ENST00000359238 DNAH7Q8WXX0 4024 aa12.41□□□□□ -0.42
SNX11-201ENST00000359238 TRBV7-6A0A0J9YX20 115 aa12.4□□□□□ -0.42
SNX11-201ENST00000359238 TENM2Q9NT68 2774 aa12.39□□□□□ -0.43
SNX11-201ENST00000359238 TRBV7-4A0A0J9YYF1 115 aa12.38□□□□□ -0.43
SNX11-201ENST00000359238 H3BQ85 93 aa12.38□□□□□ -0.43
SNX11-201ENST00000359238 KIAA0087Q14695 138 aa12.38□□□□□ -0.43
SNX11-201ENST00000359238 DNAH10Q8IVF4 4471 aa12.37□□□□□ -0.43
SNX11-201ENST00000359238 PRR34Q9NV39 138 aa12.37□□□□□ -0.43
SNX11-201ENST00000359238 CD164L2Q6UWJ8 174 aa12.37□□□□□ -0.43
SNX11-201ENST00000359238 PLECQ15149 4684 aaKnown RBP12.36□□□□□ -0.43
SNX11-201ENST00000359238 Q8NDZ9 215 aa12.36□□□□□ -0.43
SNX11-201ENST00000359238 LINC00474Q9P2X8 69 aa12.36□□□□□ -0.43
SNX11-201ENST00000359238 DYNC2H1Q8NCM8 4307 aaKnown RBP12.33□□□□□ -0.44
SNX11-201ENST00000359238 KRTAP21-3Q3LHN1 58 aa12.33□□□□□ -0.44
SNX11-201ENST00000359238 MUC7Q8TAX7 377 aa12.33□□□□□ -0.44
SNX11-201ENST00000359238 ERC2-IT1O76042 136 aa12.32□□□□□ -0.44
SNX11-201ENST00000359238 PKIGQ9Y2B9 76 aa12.32□□□□□ -0.44
SNX11-201ENST00000359238 C9orf116Q5BN46 136 aaPredicted RBP12.31□□□□□ -0.44
SNX11-201ENST00000359238 Q6ZQY7 126 aa12.31□□□□□ -0.44
SNX11-201ENST00000359238 F8WDY8 70 aa12.31□□□□□ -0.44
SNX11-201ENST00000359238 NREPQ16612 68 aa12.31□□□□□ -0.44
SNX11-201ENST00000359238 STARD9Q9P2P6 4700 aa12.3□□□□□ -0.44
SNX11-201ENST00000359238 IGLV6-57P01721 117 aa12.29□□□□□ -0.44
SNX11-201ENST00000359238 C10orf25Q5T742 122 aa12.29□□□□□ -0.44
SNX11-201ENST00000359238 TMEM254Q8TBM7 123 aa12.29□□□□□ -0.44
SNX11-201ENST00000359238 KRTAP26-1Q6PEX3 210 aa12.28□□□□□ -0.44
SNX11-201ENST00000359238 LINC00588Q9Y4M8 146 aa12.28□□□□□ -0.44
SNX11-201ENST00000359238 BPY2O14599 106 aa12.26□□□□□ -0.45
SNX11-201ENST00000359238 SCXQ7RTU7 201 aa12.26□□□□□ -0.45
SNX11-201ENST00000359238 BRK1Q8WUW1 75 aa12.26□□□□□ -0.45
SNX11-201ENST00000359238 UNQ6190/PRO20217Q6UXQ8 127 aa12.24□□□□□ -0.45
SNX11-201ENST00000359238 LINC01556Q5JQF7 62 aa12.23□□□□□ -0.45
SNX11-201ENST00000359238 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.23□□□□□ -0.45
SNX11-201ENST00000359238 SPAG11BQ08648 103 aa12.22□□□□□ -0.45
SNX11-201ENST00000359238 FAM229BQ4G0N7 80 aa12.21□□□□□ -0.45
SNX11-201ENST00000359238 HIGD2BQ4VC39 106 aa12.21□□□□□ -0.45
SNX11-201ENST00000359238 FBN3Q75N90 2809 aa12.21□□□□□ -0.45
SNX11-201ENST00000359238 A0A0U1RQV1 116 aa12.2□□□□□ -0.46
SNX11-201ENST00000359238 DNAH10OSP0CZ25 163 aa12.2□□□□□ -0.46
SNX11-201ENST00000359238 PRYO14603 147 aa12.2□□□□□ -0.46
SNX11-201ENST00000359238 C1orf195Q5TG92 126 aa12.2□□□□□ -0.46
SNX11-201ENST00000359238 DIRC1Q969H9 104 aa12.2□□□□□ -0.46
SNX11-201ENST00000359238 CASC10Q5T4H9 136 aa12.18□□□□□ -0.46
SNX11-201ENST00000359238 COX7BP24311 80 aa12.17□□□□□ -0.46
SNX11-201ENST00000359238 C15orf56Q8N910 161 aa12.17□□□□□ -0.46
SNX11-201ENST00000359238 OCR1Q9BZK8 76 aa12.17□□□□□ -0.46
SNX11-201ENST00000359238 IGKV2D-24A0A075B6R9 120 aa12.17□□□□□ -0.46
SNX11-201ENST00000359238 MPLKIPQ8TAP9 179 aa12.17□□□□□ -0.46
SNX11-201ENST00000359238 APLNQ9ULZ1 77 aa12.17□□□□□ -0.46
SNX11-201ENST00000359238 IGKV4-1P06312 121 aa12.16□□□□□ -0.46
SNX11-201ENST00000359238 FUSP35637 526 aaKnown RBP eCLIP12.16□□□□□ -0.46
SNX11-201ENST00000359238 V9GYY9 64 aa12.15□□□□□ -0.46
SNX11-201ENST00000359238 C6orf48Q9UBA6 75 aa12.14□□□□□ -0.47
SNX11-201ENST00000359238 ZNF73O43830 326 aaPredicted RBP12.14□□□□□ -0.47
SNX11-201ENST00000359238 ELOF1P60002 83 aaKnown RBP12.13□□□□□ -0.47
SNX11-201ENST00000359238 KRTAP1-5Q9BYS1 174 aa12.12□□□□□ -0.47
SNX11-201ENST00000359238 NUPR2A6NF83 97 aa12.11□□□□□ -0.47
SNX11-201ENST00000359238 UBE2DNLQ8IWF7 75 aa12.11□□□□□ -0.47
SNX11-201ENST00000359238 Q8N9L7 120 aa12.11□□□□□ -0.47
SNX11-201ENST00000359238 GVQW2A0A096LPI5 108 aaPredicted RBP12.1□□□□□ -0.47
SNX11-201ENST00000359238 Q6ZRU5 148 aa12.09□□□□□ -0.47
SNX11-201ENST00000359238 VPS13DQ5THJ4 4388 aa12.09□□□□□ -0.47
SNX11-201ENST00000359238 TGP01266 2768 aa12.09□□□□□ -0.47
SNX11-201ENST00000359238 HIGD2AQ9BW72 106 aa12.07□□□□□ -0.48
SNX11-201ENST00000359238 XAGE1AQ9HD64 81 aa12.07□□□□□ -0.48
SNX11-201ENST00000359238 SEC61GP60059 68 aa12.06□□□□□ -0.48
SNX11-201ENST00000359238 CAMK2N2Q96S95 79 aa12.06□□□□□ -0.48
SNX11-201ENST00000359238 KMT2AQ03164 3969 aa12.06□□□□□ -0.48
SNX11-201ENST00000359238 hDV103S1A0JD37 113 aa12.02□□□□□ -0.49
SNX11-201ENST00000359238 LINC00528Q8N1L1 170 aa12.02□□□□□ -0.49
SNX11-201ENST00000359238 PRR15Q8IV56 129 aa12□□□□□ -0.49
SNX11-201ENST00000359238 LCE6AA0A183 80 aa11.99□□□□□ -0.49
SNX11-201ENST00000359238 VPREB1P12018 145 aa11.99□□□□□ -0.49
SNX11-201ENST00000359238 DNAH2Q9P225 4427 aa11.99□□□□□ -0.49
SNX11-201ENST00000359238 Q6ZRP5 223 aa11.98□□□□□ -0.49
SNX11-201ENST00000359238 M0R378 163 aa11.98□□□□□ -0.49
SNX11-201ENST00000359238 Q1T7F1 81 aa11.98□□□□□ -0.49
SNX11-201ENST00000359238 C3orf84H3BNL1 204 aa11.95□□□□□ -0.5
SNX11-201ENST00000359238 SYCNQ0VAF6 134 aa11.95□□□□□ -0.5
SNX11-201ENST00000359238 SMIM29Q86T20 159 aa11.94□□□□□ -0.5
SNX11-201ENST00000359238 FAM30AQ9NZY2 134 aa11.94□□□□□ -0.5
SNX11-201ENST00000359238 A0A1B0GW54 56 aa11.92□□□□□ -0.5
SNX11-201ENST00000359238 C1orf64Q8NEQ6 169 aa11.92□□□□□ -0.5
SNX11-201ENST00000359238 NBDYA0A0U1RRE5 68 aa11.91□□□□□ -0.5
SNX11-201ENST00000359238 ZCCHC13Q8WW36 166 aaKnown RBP11.91□□□□□ -0.5
SNX11-201ENST00000359238 IGLV5-48A0A075B6I7 105 aa11.9□□□□□ -0.5
SNX11-201ENST00000359238 PSCAO43653 123 aa11.9□□□□□ -0.5
SNX11-201ENST00000359238 PMAIP1Q13794 54 aa11.88□□□□□ -0.51
SNX11-201ENST00000359238 FAM168BA1KXE4 195 aa11.87□□□□□ -0.51
SNX11-201ENST00000359238 LRCOL1A6NCL2 159 aa11.87□□□□□ -0.51
SNX11-201ENST00000359238 SERTAD4-AS1Q5TG53 156 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms