RNA–Protein interactions for RNA: ENST00000358678.7

MRPL42-201, Transcript of mitochondrial ribosomal protein L42, humanhuman

TSL 1 (best)

Gene MRPL42, Length 2,105 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL42-201ENST00000358678 SMIM11BQ8TCY0 68 aa0.73□□□□□ -2.29
MRPL42-201ENST00000358678 PMCHL2Q9BQD1 86 aa0.73□□□□□ -2.29
MRPL42-201ENST00000358678 SCP2D1Q9UJQ7 156 aa0.73□□□□□ -2.29
MRPL42-201ENST00000358678 AP4S1Q9Y587 144 aa0.73□□□□□ -2.29
MRPL42-201ENST00000358678 LENEPQ9Y5L5 61 aa0.73□□□□□ -2.29
MRPL42-201ENST00000358678 R4GMQ9 66 aa0.73□□□□□ -2.29
MRPL42-201ENST00000358678 ARL2-SNX15V9GYD0 113 aa0.73□□□□□ -2.29
MRPL42-201ENST00000358678 TRIOO75962 3097 aa0.73□□□□□ -2.29
MRPL42-201ENST00000358678 ADGRL2O95490 1459 aa0.73□□□□□ -2.29
MRPL42-201ENST00000358678 SCN7AQ01118 1682 aa0.73□□□□□ -2.29
MRPL42-201ENST00000358678 CACNA1CQ13936 2221 aa0.73□□□□□ -2.29
MRPL42-201ENST00000358678 STARD9Q9P2P6 4700 aa0.73□□□□□ -2.29
MRPL42-201ENST00000358678 KNDC1Q76NI1 1749 aa0.73□□□□□ -2.29
MRPL42-201ENST00000358678 IGLC7A0M8Q6 106 aa0.73□□□□□ -2.29
MRPL42-201ENST00000358678 TMEM14DPA8MWL7 114 aa0.73□□□□□ -2.29
MRPL42-201ENST00000358678 COL5A1-AS1Q5SY13 56 aa0.73□□□□□ -2.29
MRPL42-201ENST00000358678 VMO1Q7Z5L0 202 aa0.73□□□□□ -2.29
MRPL42-201ENST00000358678 CMYA5Q8N3K9 4069 aa0.72□□□□□ -2.29
MRPL42-201ENST00000358678 F8VRH5 84 aa0.72□□□□□ -2.29
MRPL42-201ENST00000358678 GCHFRP30047 84 aa0.72□□□□□ -2.29
MRPL42-201ENST00000358678 CENPEQ02224 2701 aa0.72□□□□□ -2.29
MRPL42-201ENST00000358678 NLRP1Q9C000 1473 aa0.72□□□□□ -2.29
MRPL42-201ENST00000358678 LRP1Q07954 4544 aaKnown RBP0.72□□□□□ -2.29
MRPL42-201ENST00000358678 A0A0G2JND7 137 aa0.71□□□□□ -2.3
MRPL42-201ENST00000358678 NAP1L6A6NFF2 107 aa0.71□□□□□ -2.3
MRPL42-201ENST00000358678 BAGE3Q86Y29 109 aa0.71□□□□□ -2.3
MRPL42-201ENST00000358678 FAM223AQ8IWN6 122 aa0.71□□□□□ -2.3
MRPL42-201ENST00000358678 CDC42SE2Q9NRR3 84 aa0.71□□□□□ -2.3
MRPL42-201ENST00000358678 ANKRD36BQ8N2N9 1353 aa0.71□□□□□ -2.3
MRPL42-201ENST00000358678 INO80Q9ULG1 1556 aaPredicted RBP0.71□□□□□ -2.3
MRPL42-201ENST00000358678 VPS8Q8N3P4 1428 aa0.71□□□□□ -2.3
MRPL42-201ENST00000358678 NSD3Q9BZ95 1437 aa0.71□□□□□ -2.3
MRPL42-201ENST00000358678 FDCSPQ8NFU4 85 aa0.71□□□□□ -2.3
MRPL42-201ENST00000358678 ALS2Q96Q42 1657 aa0.71□□□□□ -2.3
MRPL42-201ENST00000358678 KDM3BQ7LBC6 1761 aa0.71□□□□□ -2.3
MRPL42-201ENST00000358678 ATMQ13315 3056 aa0.71□□□□□ -2.3
MRPL42-201ENST00000358678 APOC3P02656 99 aa0.7□□□□□ -2.3
MRPL42-201ENST00000358678 IGLC1P0CG04 106 aa0.7□□□□□ -2.3
MRPL42-201ENST00000358678 UBE2D3P61077 147 aa0.7□□□□□ -2.3
MRPL42-201ENST00000358678 UBE2D2P62837 147 aa0.7□□□□□ -2.3
MRPL42-201ENST00000358678 AMELXQ99217 191 aa0.7□□□□□ -2.3
MRPL42-201ENST00000358678 VAMP8Q9BV40 100 aa0.7□□□□□ -2.3
MRPL42-201ENST00000358678 DPY30Q9C005 99 aa0.7□□□□□ -2.3
MRPL42-201ENST00000358678 RRBP1Q9P2E9 1410 aaKnown RBP0.7□□□□□ -2.3
MRPL42-201ENST00000358678 DMDP11532 3685 aa0.7□□□□□ -2.3
MRPL42-201ENST00000358678 TRPM2O94759 1503 aa0.7□□□□□ -2.3
MRPL42-201ENST00000358678 LRRC37AA6NMS7 1700 aa0.7□□□□□ -2.3
MRPL42-201ENST00000358678 ITSN1Q15811 1721 aa0.7□□□□□ -2.3
MRPL42-201ENST00000358678 SFT2D2O95562 160 aa0.7□□□□□ -2.3
MRPL42-201ENST00000358678 NMBP08949 121 aa0.7□□□□□ -2.3
MRPL42-201ENST00000358678 HAMPP81172 84 aa0.7□□□□□ -2.3
MRPL42-201ENST00000358678 TMEM170BQ5T4T1 132 aa0.7□□□□□ -2.3
MRPL42-201ENST00000358678 BAGE2Q86Y30 109 aa0.7□□□□□ -2.3
MRPL42-201ENST00000358678 LINC00472Q9H8W2 130 aa0.7□□□□□ -2.3
MRPL42-201ENST00000358678 UQCR10Q9UDW1 63 aa0.7□□□□□ -2.3
MRPL42-201ENST00000358678 PRO1854Q9UHT4 67 aa0.7□□□□□ -2.3
MRPL42-201ENST00000358678 LINC01558Q9Y6Z2 57 aa0.7□□□□□ -2.3
MRPL42-201ENST00000358678 PLECQ15149 4684 aaKnown RBP0.7□□□□□ -2.3
MRPL42-201ENST00000358678 FYCO1Q9BQS8 1478 aa0.69□□□□□ -2.3
MRPL42-201ENST00000358678 PDCD11Q14690 1871 aaKnown RBP0.69□□□□□ -2.3
MRPL42-201ENST00000358678 ABCC6O95255 1503 aa0.69□□□□□ -2.3
MRPL42-201ENST00000358678 PTPN23Q9H3S7 1636 aa0.69□□□□□ -2.3
MRPL42-201ENST00000358678 LAMA1P25391 3075 aa0.69□□□□□ -2.3
MRPL42-201ENST00000358678 DYNC1H1Q14204 4646 aaKnown RBP0.69□□□□□ -2.3
MRPL42-201ENST00000358678 MUC16Q8WXI7 14507 aa0.69□□□□□ -2.3
MRPL42-201ENST00000358678 TACC2O95359 2948 aa0.69□□□□□ -2.3
MRPL42-201ENST00000358678 MGAQ8IWI9 3026 aa0.69□□□□□ -2.3
MRPL42-201ENST00000358678 FAUP35544 74 aaKnown RBP0.69□□□□□ -2.3
MRPL42-201ENST00000358678 PLXNB2O15031 1838 aa0.69□□□□□ -2.3
MRPL42-201ENST00000358678 KIAA1551Q9HCM1 1747 aa0.69□□□□□ -2.3
MRPL42-201ENST00000358678 TOGARAM1Q9Y4F4 1720 aa0.69□□□□□ -2.3
MRPL42-201ENST00000358678 SPTBN1Q01082 2364 aaKnown RBP0.69□□□□□ -2.3
MRPL42-201ENST00000358678 DNAJC13O75165 2243 aa0.68□□□□□ -2.3
MRPL42-201ENST00000358678 TRAPPC2P0DI81 140 aa0.68□□□□□ -2.3
MRPL42-201ENST00000358678 TRAPPC2BP0DI82 140 aa0.68□□□□□ -2.3
MRPL42-201ENST00000358678 FAM167A-AS1Q96KT0 104 aa0.68□□□□□ -2.3
MRPL42-201ENST00000358678 PRR15LQ9BU68 103 aa0.68□□□□□ -2.3
MRPL42-201ENST00000358678 FAIMQ9NVQ4 179 aa0.68□□□□□ -2.3
MRPL42-201ENST00000358678 CLIP1P30622 1438 aa0.68□□□□□ -2.3
MRPL42-201ENST00000358678 FAM223BA6NKX1 122 aa0.68□□□□□ -2.3
MRPL42-201ENST00000358678 FXYD6P3P58550 94 aa0.68□□□□□ -2.3
MRPL42-201ENST00000358678 SPATA8Q6RVD6 105 aa0.68□□□□□ -2.3
MRPL42-201ENST00000358678 SSBP3-AS1Q7Z2R9 100 aa0.68□□□□□ -2.3
MRPL42-201ENST00000358678 LCN9Q8WX39 176 aa0.68□□□□□ -2.3
MRPL42-201ENST00000358678 CACFD1Q9UGQ2 172 aa0.68□□□□□ -2.3
MRPL42-201ENST00000358678 PLCE1Q9P212 2302 aa0.68□□□□□ -2.3
MRPL42-201ENST00000358678 PKHD1L1Q86WI1 4243 aa0.68□□□□□ -2.3
MRPL42-201ENST00000358678 CFAP74Q9C0B2 1584 aa0.68□□□□□ -2.3
MRPL42-201ENST00000358678 SBF2Q86WG5 1849 aa0.67□□□□□ -2.3
MRPL42-201ENST00000358678 ABCA9Q8IUA7 1624 aa0.67□□□□□ -2.3
MRPL42-201ENST00000358678 LMTK2Q8IWU2 1503 aa0.67□□□□□ -2.3
MRPL42-201ENST00000358678 H3BQ15 152 aa0.67□□□□□ -2.3
MRPL42-201ENST00000358678 KRTDAPP60985 99 aa0.67□□□□□ -2.3
MRPL42-201ENST00000358678 LINC00846Q9NV44 126 aa0.67□□□□□ -2.3
MRPL42-201ENST00000358678 XRN1Q8IZH2 1706 aaKnown RBP0.67□□□□□ -2.3
MRPL42-201ENST00000358678 LMO7Q8WWI1 1683 aa0.67□□□□□ -2.3
MRPL42-201ENST00000358678 PRO1933Q9H354 126 aa0.67□□□□□ -2.3
MRPL42-201ENST00000358678 NXT2Q9NPJ8 142 aaKnown RBP0.67□□□□□ -2.3
MRPL42-201ENST00000358678 DNAH9Q9NYC9 4486 aa0.66□□□□□ -2.3
MRPL42-201ENST00000358678 SRRM2Q9UQ35 2752 aaKnown RBP0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms