RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 C11orf45Q8TAV5 145 aa13.45□□□□□ -0.26
COL13A1-202ENST00000357811 LINC00336Q6ZUF6 198 aa13.44□□□□□ -0.26
COL13A1-202ENST00000357811 TRAV10A0A0B4J240 114 aa13.43□□□□□ -0.26
COL13A1-202ENST00000357811 RPL37AP8A6NKH3 93 aa13.43□□□□□ -0.26
COL13A1-202ENST00000357811 SERTAD4-AS1Q5TG53 156 aa13.43□□□□□ -0.26
COL13A1-202ENST00000357811 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.43□□□□□ -0.26
COL13A1-202ENST00000357811 SYCNQ0VAF6 134 aa13.42□□□□□ -0.26
COL13A1-202ENST00000357811 SNURFQ9Y675 71 aa13.42□□□□□ -0.26
COL13A1-202ENST00000357811 CASC10Q5T4H9 136 aa13.42□□□□□ -0.26
COL13A1-202ENST00000357811 Q8N9L7 120 aa13.41□□□□□ -0.26
COL13A1-202ENST00000357811 MRAPQ8TCY5 172 aa13.41□□□□□ -0.26
COL13A1-202ENST00000357811 KRTAP24-1Q3LI83 254 aa13.41□□□□□ -0.26
COL13A1-202ENST00000357811 FAM168BA1KXE4 195 aa13.4□□□□□ -0.26
COL13A1-202ENST00000357811 LINC00528Q8N1L1 170 aa13.39□□□□□ -0.27
COL13A1-202ENST00000357811 NKAPP1Q8N9T2 125 aa13.39□□□□□ -0.27
COL13A1-202ENST00000357811 PKIGQ9Y2B9 76 aa13.39□□□□□ -0.27
COL13A1-202ENST00000357811 CSMD3Q7Z407 3707 aa13.38□□□□□ -0.27
COL13A1-202ENST00000357811 TRBV7-4A0A0J9YYF1 115 aa13.38□□□□□ -0.27
COL13A1-202ENST00000357811 H3BNG1 76 aa13.37□□□□□ -0.27
COL13A1-202ENST00000357811 C3orf84H3BNL1 204 aa13.37□□□□□ -0.27
COL13A1-202ENST00000357811 STAB2Q8WWQ8 2551 aa13.37□□□□□ -0.27
COL13A1-202ENST00000357811 LINC01556Q5JQF7 62 aa13.36□□□□□ -0.27
COL13A1-202ENST00000357811 H7BZZ5 65 aa13.36□□□□□ -0.27
COL13A1-202ENST00000357811 C7orf33Q8WU49 177 aa13.35□□□□□ -0.27
COL13A1-202ENST00000357811 TENM2Q9NT68 2774 aa13.35□□□□□ -0.27
COL13A1-202ENST00000357811 RMI2Q96E14 147 aa13.35□□□□□ -0.27
COL13A1-202ENST00000357811 PRO0628Q9UI54 55 aa13.35□□□□□ -0.27
COL13A1-202ENST00000357811 SERP1Q9Y6X1 66 aa13.35□□□□□ -0.27
COL13A1-202ENST00000357811 CMYA5Q8N3K9 4069 aa13.33□□□□□ -0.27
COL13A1-202ENST00000357811 PDE6GP18545 87 aa13.32□□□□□ -0.28
COL13A1-202ENST00000357811 F8WEM9 126 aa13.3□□□□□ -0.28
COL13A1-202ENST00000357811 LYSTQ99698 3801 aa13.3□□□□□ -0.28
COL13A1-202ENST00000357811 LINC00588Q9Y4M8 146 aa13.29□□□□□ -0.28
COL13A1-202ENST00000357811 TRAV7A0A075B6U4 112 aa13.29□□□□□ -0.28
COL13A1-202ENST00000357811 TM2D3Q9BRN9 247 aa13.28□□□□□ -0.28
COL13A1-202ENST00000357811 LINC00474Q9P2X8 69 aa13.28□□□□□ -0.28
COL13A1-202ENST00000357811 TRBV7-6A0A0J9YX20 115 aa13.27□□□□□ -0.28
COL13A1-202ENST00000357811 ST20-AS1Q8NBB2 130 aa13.27□□□□□ -0.28
COL13A1-202ENST00000357811 Q8N377 158 aa13.26□□□□□ -0.29
COL13A1-202ENST00000357811 SRRM2Q9UQ35 2752 aaKnown RBP13.26□□□□□ -0.29
COL13A1-202ENST00000357811 BPY2O14599 106 aa13.26□□□□□ -0.29
COL13A1-202ENST00000357811 FP248Q71RG6 208 aaPredicted RBP13.26□□□□□ -0.29
COL13A1-202ENST00000357811 A0A0U1RQV1 116 aa13.25□□□□□ -0.29
COL13A1-202ENST00000357811 CXCL6P80162 114 aa13.25□□□□□ -0.29
COL13A1-202ENST00000357811 H3BQ85 93 aa13.25□□□□□ -0.29
COL13A1-202ENST00000357811 DNAH10OSP0CZ25 163 aa13.24□□□□□ -0.29
COL13A1-202ENST00000357811 KCNQ1DNQ9H478 68 aa13.24□□□□□ -0.29
COL13A1-202ENST00000357811 NREPQ16612 68 aa13.23□□□□□ -0.29
COL13A1-202ENST00000357811 BRK1Q8WUW1 75 aa13.23□□□□□ -0.29
COL13A1-202ENST00000357811 SMIM26A0A096LP01 95 aa13.23□□□□□ -0.29
COL13A1-202ENST00000357811 Q9BRP9 147 aa13.22□□□□□ -0.29
COL13A1-202ENST00000357811 DNAH10Q8IVF4 4471 aa13.21□□□□□ -0.3
COL13A1-202ENST00000357811 KRTAP7-1Q8IUC3 87 aa13.2□□□□□ -0.3
COL13A1-202ENST00000357811 ETDCA0A1B0GVM5 59 aa13.2□□□□□ -0.3
COL13A1-202ENST00000357811 KLKP1Q107X0 134 aa13.2□□□□□ -0.3
COL13A1-202ENST00000357811 A0A0G2JQZ4 141 aa13.2□□□□□ -0.3
COL13A1-202ENST00000357811 A0A1W2PNN7 141 aa13.2□□□□□ -0.3
COL13A1-202ENST00000357811 EPM2AB3EWF7 344 aa13.2□□□□□ -0.3
COL13A1-202ENST00000357811 ERC2-IT1O76042 136 aa13.19□□□□□ -0.3
COL13A1-202ENST00000357811 COL7A1Q02388 2944 aa13.19□□□□□ -0.3
COL13A1-202ENST00000357811 MPLKIPQ8TAP9 179 aa13.18□□□□□ -0.3
COL13A1-202ENST00000357811 Q6ZRX8 168 aa13.17□□□□□ -0.3
COL13A1-202ENST00000357811 UBE2BP63146 152 aa13.16□□□□□ -0.3
COL13A1-202ENST00000357811 IGKV2-24A0A0C4DH68 120 aa13.16□□□□□ -0.3
COL13A1-202ENST00000357811 IGLV1-50A0A075B6I6 118 aa13.14□□□□□ -0.31
COL13A1-202ENST00000357811 IGKV4-1P06312 121 aa13.13□□□□□ -0.31
COL13A1-202ENST00000357811 HUWE1Q7Z6Z7 4374 aaKnown RBP13.13□□□□□ -0.31
COL13A1-202ENST00000357811 A0A1W2PNM2 257 aa13.11□□□□□ -0.31
COL13A1-202ENST00000357811 MRPL55Q7Z7F7 128 aaKnown RBP13.11□□□□□ -0.31
COL13A1-202ENST00000357811 C1orf137Q5JT78 98 aa13.11□□□□□ -0.31
COL13A1-202ENST00000357811 KRTAP4-16G5E9R7 235 aaPredicted RBP13.09□□□□□ -0.31
COL13A1-202ENST00000357811 DNAH3Q8TD57 4116 aa13.09□□□□□ -0.31
COL13A1-202ENST00000357811 DHRS4-AS1Q9P1J3 65 aa13.09□□□□□ -0.31
COL13A1-202ENST00000357811 BCE1O60756 84 aa13.08□□□□□ -0.32
COL13A1-202ENST00000357811 TLX1NBP0CAT3 122 aa13.08□□□□□ -0.32
COL13A1-202ENST00000357811 FUSP35637 526 aaKnown RBP eCLIP13.08□□□□□ -0.32
COL13A1-202ENST00000357811 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.08□□□□□ -0.32
COL13A1-202ENST00000357811 K7EIL1 84 aa13.07□□□□□ -0.32
COL13A1-202ENST00000357811 IGLV5-48A0A075B6I7 105 aa13.07□□□□□ -0.32
COL13A1-202ENST00000357811 FAM229BQ4G0N7 80 aa13.07□□□□□ -0.32
COL13A1-202ENST00000357811 F8WDY8 70 aa13.06□□□□□ -0.32
COL13A1-202ENST00000357811 PRLHP81277 87 aa13.06□□□□□ -0.32
COL13A1-202ENST00000357811 KRTAP1-5Q9BYS1 174 aa13.06□□□□□ -0.32
COL13A1-202ENST00000357811 PRYO14603 147 aa13.05□□□□□ -0.32
COL13A1-202ENST00000357811 DEFB116Q30KQ4 102 aa13.05□□□□□ -0.32
COL13A1-202ENST00000357811 DNAH1Q9P2D7 4330 aa13.04□□□□□ -0.32
COL13A1-202ENST00000357811 C1orf195Q5TG92 126 aa13.04□□□□□ -0.32
COL13A1-202ENST00000357811 TMEM254Q8TBM7 123 aa13.04□□□□□ -0.32
COL13A1-202ENST00000357811 FAM30AQ9NZY2 134 aa13.03□□□□□ -0.32
COL13A1-202ENST00000357811 NDUFC1O43677 76 aa13.02□□□□□ -0.32
COL13A1-202ENST00000357811 SPRR1AP35321 89 aa13.02□□□□□ -0.33
COL13A1-202ENST00000357811 A0A096LNI7 61 aa13.02□□□□□ -0.33
COL13A1-202ENST00000357811 HIGD2AQ9BW72 106 aa13.02□□□□□ -0.33
COL13A1-202ENST00000357811 PSCAO43653 123 aa13.01□□□□□ -0.33
COL13A1-202ENST00000357811 REG3GQ6UW15 175 aa13.01□□□□□ -0.33
COL13A1-202ENST00000357811 SMIM29Q86T20 159 aa13.01□□□□□ -0.33
COL13A1-202ENST00000357811 PLA2G2DQ9UNK4 145 aa13.01□□□□□ -0.33
COL13A1-202ENST00000357811 DNAH9Q9NYC9 4486 aa13□□□□□ -0.33
COL13A1-202ENST00000357811 CHTF8P0CG12 524 aa12.99□□□□□ -0.33
COL13A1-202ENST00000357811 V9GYY9 64 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms