RNA–Protein interactions for RNA: ENST00000357641.10

BRPF3-202, Transcript of bromodomain and PHD finger containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRPF3, Length 6,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-202ENST00000357641 C9orf92A6NGG3 77 aa12.48□□□□□ -0.41
BRPF3-202ENST00000357641 Q75L30 129 aa12.47□□□□□ -0.41
BRPF3-202ENST00000357641 Q8N1X5 172 aa12.47□□□□□ -0.41
BRPF3-202ENST00000357641 PRAC1Q96KF2 57 aa12.47□□□□□ -0.41
BRPF3-202ENST00000357641 CYSTM1Q9H1C7 97 aa12.47□□□□□ -0.41
BRPF3-202ENST00000357641 ANAPC11Q9NYG5 84 aa12.45□□□□□ -0.42
BRPF3-202ENST00000357641 FP248Q71RG6 208 aaPredicted RBP12.45□□□□□ -0.42
BRPF3-202ENST00000357641 LUZP6Q538Z0 58 aa12.42□□□□□ -0.42
BRPF3-202ENST00000357641 IGLV5-48A0A075B6I7 105 aa12.42□□□□□ -0.42
BRPF3-202ENST00000357641 PLA2G2DQ9UNK4 145 aa12.41□□□□□ -0.42
BRPF3-202ENST00000357641 ZNF861PO60384 105 aa12.38□□□□□ -0.43
BRPF3-202ENST00000357641 IGF2RP11717 2491 aa12.38□□□□□ -0.43
BRPF3-202ENST00000357641 TLX1NBP0CAT3 122 aa12.37□□□□□ -0.43
BRPF3-202ENST00000357641 WDR87Q6ZQQ6 2873 aa12.35□□□□□ -0.43
BRPF3-202ENST00000357641 IGLV7-46A0A075B6I9 117 aa12.35□□□□□ -0.43
BRPF3-202ENST00000357641 LINC00304Q8N9R0 145 aa12.33□□□□□ -0.44
BRPF3-202ENST00000357641 Q8N9P0 234 aaPredicted RBP12.32□□□□□ -0.44
BRPF3-202ENST00000357641 GIG44P09565 113 aaPredicted RBP12.32□□□□□ -0.44
BRPF3-202ENST00000357641 COL4A2P08572 1712 aa12.31□□□□□ -0.44
BRPF3-202ENST00000357641 LINC01558Q9Y6Z2 57 aa12.29□□□□□ -0.44
BRPF3-202ENST00000357641 Q5VV11 94 aa12.28□□□□□ -0.44
BRPF3-202ENST00000357641 SPRR4Q96PI1 79 aa12.28□□□□□ -0.44
BRPF3-202ENST00000357641 ABCA12Q86UK0 2595 aa12.28□□□□□ -0.44
BRPF3-202ENST00000357641 IGLV5-37A0A075B6J1 123 aa12.27□□□□□ -0.45
BRPF3-202ENST00000357641 CSAG1Q6PB30 78 aa12.26□□□□□ -0.45
BRPF3-202ENST00000357641 TLN1Q9Y490 2541 aaKnown RBP12.24□□□□□ -0.45
BRPF3-202ENST00000357641 CASC10Q5T4H9 136 aa12.24□□□□□ -0.45
BRPF3-202ENST00000357641 LINC00612Q8N6U2 182 aa12.24□□□□□ -0.45
BRPF3-202ENST00000357641 A0A1B0GU33 70 aa12.24□□□□□ -0.45
BRPF3-202ENST00000357641 NCOR2Q9Y618 2525 aa12.23□□□□□ -0.45
BRPF3-202ENST00000357641 A0A096LNT2 108 aa12.23□□□□□ -0.45
BRPF3-202ENST00000357641 OXTP01178 125 aa12.23□□□□□ -0.45
BRPF3-202ENST00000357641 KRTAP24-1Q3LI83 254 aa12.22□□□□□ -0.45
BRPF3-202ENST00000357641 COX6B2Q6YFQ2 88 aa12.22□□□□□ -0.45
BRPF3-202ENST00000357641 HRES1P13985 223 aa12.21□□□□□ -0.45
BRPF3-202ENST00000357641 TLN2Q9Y4G6 2542 aa12.21□□□□□ -0.45
BRPF3-202ENST00000357641 JMJD1CQ15652 2540 aa12.21□□□□□ -0.46
BRPF3-202ENST00000357641 ZNF575Q86XF7 245 aa12.21□□□□□ -0.46
BRPF3-202ENST00000357641 CNBPP62633 177 aaKnown RBP12.2□□□□□ -0.46
BRPF3-202ENST00000357641 PSORS1C2Q9UIG4 136 aa12.19□□□□□ -0.46
BRPF3-202ENST00000357641 USP9XQ93008 2570 aaPredicted RBP12.19□□□□□ -0.46
BRPF3-202ENST00000357641 LRRK2Q5S007 2527 aa12.19□□□□□ -0.46
BRPF3-202ENST00000357641 C19orf73Q9NVV2 129 aa12.19□□□□□ -0.46
BRPF3-202ENST00000357641 IGLV7-43P04211 117 aa12.18□□□□□ -0.46
BRPF3-202ENST00000357641 SPINK7P58062 85 aa12.18□□□□□ -0.46
BRPF3-202ENST00000357641 PKD1L2Q7Z442 2459 aa12.18□□□□□ -0.46
BRPF3-202ENST00000357641 SETD2Q9BYW2 2564 aaPredicted RBP12.18□□□□□ -0.46
BRPF3-202ENST00000357641 KRTAP10-11P60412 298 aa12.14□□□□□ -0.47
BRPF3-202ENST00000357641 PCSK5Q92824 1860 aa12.12□□□□□ -0.47
BRPF3-202ENST00000357641 A0A087WTM6 91 aa12.12□□□□□ -0.47
BRPF3-202ENST00000357641 MMP24-AS1A0A0U1RRL7 71 aa12.06□□□□□ -0.48
BRPF3-202ENST00000357641 A0A0A0MQY5 61 aa12.06□□□□□ -0.48
BRPF3-202ENST00000357641 DMAC1Q96GE9 116 aa12.03□□□□□ -0.48
BRPF3-202ENST00000357641 SMR3BP02814 79 aaPredicted RBP12.02□□□□□ -0.48
BRPF3-202ENST00000357641 KRTAP10-3P60369 221 aa12.01□□□□□ -0.49
BRPF3-202ENST00000357641 LINC00483Q53H64 154 aa12□□□□□ -0.49
BRPF3-202ENST00000357641 CR1P17927 2039 aa11.99□□□□□ -0.49
BRPF3-202ENST00000357641 K7EIL1 84 aa11.99□□□□□ -0.49
BRPF3-202ENST00000357641 F8P00451 2351 aa11.99□□□□□ -0.49
BRPF3-202ENST00000357641 ZFYVE26Q68DK2 2539 aa11.97□□□□□ -0.49
BRPF3-202ENST00000357641 Q8NDZ9 215 aa11.97□□□□□ -0.49
BRPF3-202ENST00000357641 USP9YO00507 2555 aaPredicted RBP11.95□□□□□ -0.5
BRPF3-202ENST00000357641 J3QL48 77 aa11.95□□□□□ -0.5
BRPF3-202ENST00000357641 CAMK2N1Q7Z7J9 78 aa11.94□□□□□ -0.5
BRPF3-202ENST00000357641 WWC2-AS2Q96NR7 200 aa11.91□□□□□ -0.5
BRPF3-202ENST00000357641 CENPFP49454 3210 aa11.87□□□□□ -0.51
BRPF3-202ENST00000357641 Q5W150 140 aa11.87□□□□□ -0.51
BRPF3-202ENST00000357641 ZCCHC13Q8WW36 166 aaKnown RBP11.81□□□□□ -0.52
BRPF3-202ENST00000357641 LINC00472Q9H8W2 130 aa11.8□□□□□ -0.52
BRPF3-202ENST00000357641 ROMO1P60602 79 aa11.8□□□□□ -0.52
BRPF3-202ENST00000357641 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.78□□□□□ -0.52
BRPF3-202ENST00000357641 MTORP42345 2549 aa11.78□□□□□ -0.52
BRPF3-202ENST00000357641 ACANP16112 2415 aa11.76□□□□□ -0.53
BRPF3-202ENST00000357641 SPRR1AP35321 89 aa11.75□□□□□ -0.53
BRPF3-202ENST00000357641 ANKRD17O75179 2603 aaKnown RBP11.75□□□□□ -0.53
BRPF3-202ENST00000357641 S4R3F8 94 aa11.75□□□□□ -0.53
BRPF3-202ENST00000357641 ANKRD11Q6UB99 2663 aaPredicted RBP11.74□□□□□ -0.53
BRPF3-202ENST00000357641 Q6ZSA8 131 aa11.73□□□□□ -0.53
BRPF3-202ENST00000357641 CHD8Q9HCK8 2581 aa11.72□□□□□ -0.53
BRPF3-202ENST00000357641 PIEZO1Q92508 2521 aa11.72□□□□□ -0.53
BRPF3-202ENST00000357641 POLQO75417 2590 aa11.7□□□□□ -0.54
BRPF3-202ENST00000357641 CEP295Q9C0D2 2601 aa11.7□□□□□ -0.54
BRPF3-202ENST00000357641 RPL37P61927 97 aaKnown RBP11.69□□□□□ -0.54
BRPF3-202ENST00000357641 ASB16-AS1Q495Z4 193 aa11.67□□□□□ -0.54
BRPF3-202ENST00000357641 KRTAP16-1A8MUX0 517 aa11.65□□□□□ -0.54
BRPF3-202ENST00000357641 H1FX-AS1Q4G0G2 97 aa11.64□□□□□ -0.55
BRPF3-202ENST00000357641 KRTAP26-1Q6PEX3 210 aa11.64□□□□□ -0.55
BRPF3-202ENST00000357641 A6NN06 94 aa11.6□□□□□ -0.55
BRPF3-202ENST00000357641 SPRR1BP22528 89 aa11.6□□□□□ -0.55
BRPF3-202ENST00000357641 TNP2Q05952 138 aa11.6□□□□□ -0.55
BRPF3-202ENST00000357641 SPATA8Q6RVD6 105 aa11.57□□□□□ -0.56
BRPF3-202ENST00000357641 R4GN34 69 aa11.54□□□□□ -0.56
BRPF3-202ENST00000357641 Q6ZR54 194 aa11.52□□□□□ -0.57
BRPF3-202ENST00000357641 PLAC8Q9NZF1 115 aa11.5□□□□□ -0.57
BRPF3-202ENST00000357641 SPTBN4Q9H254 2564 aa11.49□□□□□ -0.57
BRPF3-202ENST00000357641 KRTAP1-3Q8IUG1 177 aa11.47□□□□□ -0.57
BRPF3-202ENST00000357641 KRTAP29-1A8MX34 341 aaPredicted RBP11.47□□□□□ -0.57
BRPF3-202ENST00000357641 KRTAP25-1Q3LHN0 102 aa11.47□□□□□ -0.57
BRPF3-202ENST00000357641 ADM2Q7Z4H4 148 aa11.47□□□□□ -0.57
BRPF3-202ENST00000357641 EP400Q96L91 3159 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms