RNA–Protein interactions for RNA: ENST00000350773.8

TSC2-202, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSC2, Length 5,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-202ENST00000350773 CHD7Q9P2D1 2997 aa10.56□□□□□ -0.72
TSC2-202ENST00000350773 ANKRD17O75179 2603 aaKnown RBP10.55□□□□□ -0.72
TSC2-202ENST00000350773 TLX1NBP0CAT3 122 aa10.55□□□□□ -0.72
TSC2-202ENST00000350773 TYMSOSQ8TAI1 123 aa10.55□□□□□ -0.72
TSC2-202ENST00000350773 LINC01600Q96MT4 127 aa10.54□□□□□ -0.72
TSC2-202ENST00000350773 ZNF575Q86XF7 245 aa10.52□□□□□ -0.73
TSC2-202ENST00000350773 C8orf17Q9NRJ1 99 aa10.51□□□□□ -0.73
TSC2-202ENST00000350773 OBSCN-AS1Q96MR7 158 aa10.5□□□□□ -0.73
TSC2-202ENST00000350773 Q96NJ1 140 aa10.49□□□□□ -0.73
TSC2-202ENST00000350773 POLQO75417 2590 aa10.49□□□□□ -0.73
TSC2-202ENST00000350773 C5orf42Q9H799 3197 aa10.49□□□□□ -0.73
TSC2-202ENST00000350773 KRTAP10-11P60412 298 aa10.48□□□□□ -0.73
TSC2-202ENST00000350773 IGLV8-61A0A075B6I0 122 aa10.47□□□□□ -0.73
TSC2-202ENST00000350773 A0A1B0GVX0 72 aa10.46□□□□□ -0.73
TSC2-202ENST00000350773 LINC00336Q6ZUF6 198 aa10.46□□□□□ -0.73
TSC2-202ENST00000350773 KRTAP10-3P60369 221 aa10.46□□□□□ -0.74
TSC2-202ENST00000350773 BPTFQ12830 3046 aa10.45□□□□□ -0.74
TSC2-202ENST00000350773 CHD9Q3L8U1 2897 aa10.44□□□□□ -0.74
TSC2-202ENST00000350773 UQCR11O14957 56 aa10.43□□□□□ -0.74
TSC2-202ENST00000350773 ACANP16112 2415 aa10.42□□□□□ -0.74
TSC2-202ENST00000350773 A0A1W2PNM2 257 aa10.42□□□□□ -0.74
TSC2-202ENST00000350773 A0A0G2JQZ4 141 aa10.41□□□□□ -0.74
TSC2-202ENST00000350773 A0A1W2PNN7 141 aa10.41□□□□□ -0.74
TSC2-202ENST00000350773 ZNF861PO60384 105 aa10.4□□□□□ -0.74
TSC2-202ENST00000350773 DSCR10P59022 87 aa10.4□□□□□ -0.74
TSC2-202ENST00000350773 SSBP3-AS1Q7Z2R9 100 aa10.4□□□□□ -0.74
TSC2-202ENST00000350773 EPG5Q9HCE0 2579 aa10.4□□□□□ -0.74
TSC2-202ENST00000350773 K7EIL1 84 aa10.38□□□□□ -0.75
TSC2-202ENST00000350773 IGLV5-48A0A075B6I7 105 aa10.38□□□□□ -0.75
TSC2-202ENST00000350773 C9orf163Q8N9P6 203 aa10.38□□□□□ -0.75
TSC2-202ENST00000350773 SPANXA2-OT1Q8N9U9 137 aa10.38□□□□□ -0.75
TSC2-202ENST00000350773 PLA2G1BP04054 148 aaKnown RBP10.37□□□□□ -0.75
TSC2-202ENST00000350773 FAM104AQ969W3 186 aa10.36□□□□□ -0.75
TSC2-202ENST00000350773 IGLV5-37A0A075B6J1 123 aa10.35□□□□□ -0.75
TSC2-202ENST00000350773 MIR22HGQ0VDD5 57 aa10.34□□□□□ -0.75
TSC2-202ENST00000350773 CNBPP62633 177 aaKnown RBP10.33□□□□□ -0.76
TSC2-202ENST00000350773 A0A087WTM6 91 aa10.31□□□□□ -0.76
TSC2-202ENST00000350773 CASC10Q5T4H9 136 aa10.3□□□□□ -0.76
TSC2-202ENST00000350773 KRTAP1-3Q8IUG1 177 aa10.3□□□□□ -0.76
TSC2-202ENST00000350773 WWC2-AS2Q96NR7 200 aa10.3□□□□□ -0.76
TSC2-202ENST00000350773 OCR1Q9BZK8 76 aa10.3□□□□□ -0.76
TSC2-202ENST00000350773 SPRR4Q96PI1 79 aa10.3□□□□□ -0.76
TSC2-202ENST00000350773 MKI67P46013 3256 aaKnown RBP10.29□□□□□ -0.76
TSC2-202ENST00000350773 CD164Q04900 197 aa10.29□□□□□ -0.76
TSC2-202ENST00000350773 RANBP2P49792 3224 aaKnown RBP10.28□□□□□ -0.76
TSC2-202ENST00000350773 KTN1-AS1Q86SY8 53 aa10.27□□□□□ -0.76
TSC2-202ENST00000350773 FLNBO75369 2602 aaKnown RBP10.27□□□□□ -0.77
TSC2-202ENST00000350773 BRCA2P51587 3418 aa10.26□□□□□ -0.77
TSC2-202ENST00000350773 SPINT4Q6UDR6 99 aa10.26□□□□□ -0.77
TSC2-202ENST00000350773 TRANK1O15050 2925 aa10.26□□□□□ -0.77
TSC2-202ENST00000350773 LINC00304Q8N9R0 145 aa10.26□□□□□ -0.77
TSC2-202ENST00000350773 IGLV7-43P04211 117 aa10.25□□□□□ -0.77
TSC2-202ENST00000350773 PSORS1C2Q9UIG4 136 aa10.24□□□□□ -0.77
TSC2-202ENST00000350773 ANAPC11Q9NYG5 84 aa10.23□□□□□ -0.77
TSC2-202ENST00000350773 KRTAP1-1Q07627 177 aa10.23□□□□□ -0.77
TSC2-202ENST00000350773 Q1T7F1 81 aa10.22□□□□□ -0.77
TSC2-202ENST00000350773 APLNQ9ULZ1 77 aa10.22□□□□□ -0.77
TSC2-202ENST00000350773 F8P00451 2351 aa10.21□□□□□ -0.77
TSC2-202ENST00000350773 CDC42SE1Q9NRR8 79 aa10.21□□□□□ -0.78
TSC2-202ENST00000350773 LAMA3Q16787 3333 aa10.2□□□□□ -0.78
TSC2-202ENST00000350773 PRRC2CQ9Y520 2896 aaKnown RBP10.19□□□□□ -0.78
TSC2-202ENST00000350773 LCA10Q71F78 164 aa10.18□□□□□ -0.78
TSC2-202ENST00000350773 WIPF1O43516 503 aa10.16□□□□□ -0.78
TSC2-202ENST00000350773 C9orf92A6NGG3 77 aa10.14□□□□□ -0.79
TSC2-202ENST00000350773 CRIPTQ9P021 101 aa10.11□□□□□ -0.79
TSC2-202ENST00000350773 IGLV7-46A0A075B6I9 117 aa10.1□□□□□ -0.79
TSC2-202ENST00000350773 HECTD1Q9ULT8 2610 aa10.09□□□□□ -0.79
TSC2-202ENST00000350773 Q8NDZ9 215 aa10.07□□□□□ -0.8
TSC2-202ENST00000350773 USP24Q9UPU5 2620 aa10.06□□□□□ -0.8
TSC2-202ENST00000350773 Q5XG85 94 aa10.06□□□□□ -0.8
TSC2-202ENST00000350773 Q8N1X5 172 aa10.04□□□□□ -0.8
TSC2-202ENST00000350773 PRR26Q8N8Z3 221 aa10.04□□□□□ -0.8
TSC2-202ENST00000350773 CYSTM1Q9H1C7 97 aa10.03□□□□□ -0.8
TSC2-202ENST00000350773 Q75L30 129 aa10.03□□□□□ -0.8
TSC2-202ENST00000350773 MGAM2Q2M2H8 2515 aa10.03□□□□□ -0.8
TSC2-202ENST00000350773 SPRR1AP35321 89 aa10.03□□□□□ -0.8
TSC2-202ENST00000350773 CR1P17927 2039 aa10.02□□□□□ -0.81
TSC2-202ENST00000350773 FAM229BQ4G0N7 80 aa9.99□□□□□ -0.81
TSC2-202ENST00000350773 SMR3BP02814 79 aaPredicted RBP9.99□□□□□ -0.81
TSC2-202ENST00000350773 MMP24-AS1A0A0U1RRL7 71 aa9.99□□□□□ -0.81
TSC2-202ENST00000350773 FP248Q71RG6 208 aaPredicted RBP9.97□□□□□ -0.81
TSC2-202ENST00000350773 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.96□□□□□ -0.82
TSC2-202ENST00000350773 HRES1P13985 223 aa9.96□□□□□ -0.82
TSC2-202ENST00000350773 UNC80Q8N2C7 3258 aa9.95□□□□□ -0.82
TSC2-202ENST00000350773 LAMA2P24043 3122 aaKnown RBP9.95□□□□□ -0.82
TSC2-202ENST00000350773 LINC01558Q9Y6Z2 57 aa9.95□□□□□ -0.82
TSC2-202ENST00000350773 Q8N9P0 234 aaPredicted RBP9.94□□□□□ -0.82
TSC2-202ENST00000350773 CDH23Q9H251 3354 aa9.94□□□□□ -0.82
TSC2-202ENST00000350773 PRUNE2Q8WUY3 3088 aa9.92□□□□□ -0.82
TSC2-202ENST00000350773 J3QL48 77 aa9.92□□□□□ -0.82
TSC2-202ENST00000350773 RBM12B-AS1Q9P1G2 102 aa9.92□□□□□ -0.82
TSC2-202ENST00000350773 COX6B2Q6YFQ2 88 aa9.91□□□□□ -0.82
TSC2-202ENST00000350773 SPRR1BP22528 89 aa9.9□□□□□ -0.82
TSC2-202ENST00000350773 A0A0D9SG42 100 aa9.9□□□□□ -0.82
TSC2-202ENST00000350773 TNP2Q05952 138 aa9.88□□□□□ -0.83
TSC2-202ENST00000350773 ATRQ13535 2644 aa9.88□□□□□ -0.83
TSC2-202ENST00000350773 LINC00472Q9H8W2 130 aa9.88□□□□□ -0.83
TSC2-202ENST00000350773 MAST4O15021 2626 aa9.87□□□□□ -0.83
TSC2-202ENST00000350773 PLAC8Q9NZF1 115 aa9.86□□□□□ -0.83
TSC2-202ENST00000350773 A0A1B0GU33 70 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms