RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 SOSTDC1Q6X4U4 206 aa9.29□□□□□ -0.92
TSPAN4-201ENST00000346501 SPRR4Q96PI1 79 aa9.29□□□□□ -0.92
TSPAN4-201ENST00000346501 B5MCH6 92 aa9.28□□□□□ -0.92
TSPAN4-201ENST00000346501 KRTAP4-16G5E9R7 235 aaPredicted RBP9.28□□□□□ -0.92
TSPAN4-201ENST00000346501 PRR4Q16378 134 aa9.28□□□□□ -0.92
TSPAN4-201ENST00000346501 HIST3H2BBQ8N257 126 aa9.28□□□□□ -0.92
TSPAN4-201ENST00000346501 LINC00304Q8N9R0 145 aa9.28□□□□□ -0.92
TSPAN4-201ENST00000346501 LITAFQ99732 161 aa9.28□□□□□ -0.92
TSPAN4-201ENST00000346501 TTTY13Q9BZ97 58 aa9.28□□□□□ -0.92
TSPAN4-201ENST00000346501 ZNF73O43830 326 aaPredicted RBP9.27□□□□□ -0.93
TSPAN4-201ENST00000346501 KRTAP13-2Q52LG2 175 aa9.27□□□□□ -0.93
TSPAN4-201ENST00000346501 Q6ZRX8 168 aa9.27□□□□□ -0.93
TSPAN4-201ENST00000346501 HIST1H2BLQ99880 126 aa9.27□□□□□ -0.93
TSPAN4-201ENST00000346501 IFITM1P13164 125 aa9.26□□□□□ -0.93
TSPAN4-201ENST00000346501 ANKRD39Q53RE8 183 aa9.26□□□□□ -0.93
TSPAN4-201ENST00000346501 Q6ZVH6 145 aa9.26□□□□□ -0.93
TSPAN4-201ENST00000346501 SPANXDQ9BXN6 97 aa9.26□□□□□ -0.93
TSPAN4-201ENST00000346501 CTAG1AP78358 180 aa9.25□□□□□ -0.93
TSPAN4-201ENST00000346501 C4orf48Q5BLP8 95 aa9.25□□□□□ -0.93
TSPAN4-201ENST00000346501 EIF4EBP3O60516 100 aaPredicted RBP9.24□□□□□ -0.93
TSPAN4-201ENST00000346501 SPAG11AQ6PDA7 123 aa9.24□□□□□ -0.93
TSPAN4-201ENST00000346501 GAGE2AQ6NT46 116 aa9.23□□□□□ -0.93
TSPAN4-201ENST00000346501 PPDPFQ9H3Y8 114 aa9.23□□□□□ -0.93
TSPAN4-201ENST00000346501 C3orf22Q8N5N4 141 aa9.22□□□□□ -0.93
TSPAN4-201ENST00000346501 PCP2Q8IVA1 136 aa9.2□□□□□ -0.94
TSPAN4-201ENST00000346501 C5orf52A6NGY3 159 aa9.19□□□□□ -0.94
TSPAN4-201ENST00000346501 SCGB1D1O95968 90 aa9.19□□□□□ -0.94
TSPAN4-201ENST00000346501 Q9BRP9 147 aa9.19□□□□□ -0.94
TSPAN4-201ENST00000346501 DHRS4-AS1Q9P1J3 65 aa9.19□□□□□ -0.94
TSPAN4-201ENST00000346501 A6NDN8 102 aa9.18□□□□□ -0.94
TSPAN4-201ENST00000346501 LINC00483Q53H64 154 aa9.18□□□□□ -0.94
TSPAN4-201ENST00000346501 ERC2-IT1O76042 136 aa9.17□□□□□ -0.94
TSPAN4-201ENST00000346501 MUSTN1Q8IVN3 82 aa9.17□□□□□ -0.94
TSPAN4-201ENST00000346501 IGLV9-49A0A0B4J1Y8 123 aa9.16□□□□□ -0.94
TSPAN4-201ENST00000346501 COX7BP24311 80 aa9.16□□□□□ -0.94
TSPAN4-201ENST00000346501 SLC25A34Q6PIV7 304 aa9.16□□□□□ -0.94
TSPAN4-201ENST00000346501 TRAV13-2A0A0B4J235 113 aa9.15□□□□□ -0.94
TSPAN4-201ENST00000346501 C6orf99Q4VX62 202 aa9.15□□□□□ -0.94
TSPAN4-201ENST00000346501 SSBP3-AS1Q7Z2R9 100 aa9.15□□□□□ -0.94
TSPAN4-201ENST00000346501 Q8NBF4 154 aa9.15□□□□□ -0.94
TSPAN4-201ENST00000346501 MOBPQ13875 183 aa9.13□□□□□ -0.95
TSPAN4-201ENST00000346501 TRBV7-6A0A0J9YX20 115 aa9.12□□□□□ -0.95
TSPAN4-201ENST00000346501 SPINK1P00995 79 aa9.12□□□□□ -0.95
TSPAN4-201ENST00000346501 ELOF1P60002 83 aaKnown RBP9.12□□□□□ -0.95
TSPAN4-201ENST00000346501 C9orf153Q5TBE3 101 aa9.12□□□□□ -0.95
TSPAN4-201ENST00000346501 A0A1B0GWB2 263 aa9.11□□□□□ -0.95
TSPAN4-201ENST00000346501 RETNLBQ9BQ08 111 aa9.11□□□□□ -0.95
TSPAN4-201ENST00000346501 A4D1N5 150 aa9.1□□□□□ -0.95
TSPAN4-201ENST00000346501 TAL2Q16559 108 aa9.1□□□□□ -0.95
TSPAN4-201ENST00000346501 VAMP3Q15836 100 aa9.09□□□□□ -0.95
TSPAN4-201ENST00000346501 ST20-AS1Q8NBB2 130 aa9.09□□□□□ -0.95
TSPAN4-201ENST00000346501 NHP2Q9NX24 153 aaKnown RBP9.09□□□□□ -0.95
TSPAN4-201ENST00000346501 LAMTOR3Q9UHA4 124 aa9.09□□□□□ -0.95
TSPAN4-201ENST00000346501 LRP2P98164 4655 aa9.08□□□□□ -0.96
TSPAN4-201ENST00000346501 IGLV7-46A0A075B6I9 117 aa9.07□□□□□ -0.96
TSPAN4-201ENST00000346501 HIST1H4GQ99525 98 aa9.07□□□□□ -0.96
TSPAN4-201ENST00000346501 TMA7Q9Y2S6 64 aaKnown RBP9.07□□□□□ -0.96
TSPAN4-201ENST00000346501 SLC25A20O43772 301 aa9.06□□□□□ -0.96
TSPAN4-201ENST00000346501 COX8AP10176 69 aa9.06□□□□□ -0.96
TSPAN4-201ENST00000346501 RNF213Q63HN8 5207 aa9.05□□□□□ -0.96
TSPAN4-201ENST00000346501 FP248Q71RG6 208 aaPredicted RBP9.05□□□□□ -0.96
TSPAN4-201ENST00000346501 DEFB105AQ8NG35 78 aa9.05□□□□□ -0.96
TSPAN4-201ENST00000346501 TEX49A0A1B0GTD5 131 aa9.04□□□□□ -0.96
TSPAN4-201ENST00000346501 SPRR1BP22528 89 aa9.04□□□□□ -0.96
TSPAN4-201ENST00000346501 RPS29P62273 56 aaKnown RBP9.04□□□□□ -0.96
TSPAN4-201ENST00000346501 SMIM11BQ8TCY0 68 aa9.04□□□□□ -0.96
TSPAN4-201ENST00000346501 CDIP1Q9H305 208 aa9.04□□□□□ -0.96
TSPAN4-201ENST00000346501 DLEU1O43261 78 aa9.03□□□□□ -0.96
TSPAN4-201ENST00000346501 VAMP8Q9BV40 100 aa9.03□□□□□ -0.96
TSPAN4-201ENST00000346501 LOC105371267A0A1B0GV96 52 aa9.01□□□□□ -0.97
TSPAN4-201ENST00000346501 TPRXLQ17RH7 258 aa9.01□□□□□ -0.97
TSPAN4-201ENST00000346501 SPATA45Q537H7 98 aa9.01□□□□□ -0.97
TSPAN4-201ENST00000346501 PAM16Q9Y3D7 125 aa9.01□□□□□ -0.97
TSPAN4-201ENST00000346501 Q1RN00 199 aa8.99□□□□□ -0.97
TSPAN4-201ENST00000346501 C14orf144Q96I85 54 aa8.99□□□□□ -0.97
TSPAN4-201ENST00000346501 LIMD2Q9BT23 127 aa8.98□□□□□ -0.97
TSPAN4-201ENST00000346501 PRO1933Q9H354 126 aa8.98□□□□□ -0.97
TSPAN4-201ENST00000346501 BVES-AS1Q5T3Y7 98 aa8.97□□□□□ -0.97
TSPAN4-201ENST00000346501 SNCGO76070 127 aa8.96□□□□□ -0.98
TSPAN4-201ENST00000346501 RAB37Q96AX2 223 aa8.96□□□□□ -0.98
TSPAN4-201ENST00000346501 C12orf57Q99622 126 aa8.96□□□□□ -0.98
TSPAN4-201ENST00000346501 HIGD1BQ9P298 99 aa8.96□□□□□ -0.98
TSPAN4-201ENST00000346501 F8WEM9 126 aa8.95□□□□□ -0.98
TSPAN4-201ENST00000346501 Q8N377 158 aa8.95□□□□□ -0.98
TSPAN4-201ENST00000346501 IGLV5-48A0A075B6I7 105 aa8.94□□□□□ -0.98
TSPAN4-201ENST00000346501 hADV29S1A0JD25 119 aa8.94□□□□□ -0.98
TSPAN4-201ENST00000346501 TMEM238LA0A1B0GVL6 79 aa8.93□□□□□ -0.98
TSPAN4-201ENST00000346501 A6NJY4 79 aa8.93□□□□□ -0.98
TSPAN4-201ENST00000346501 HRCT1Q6UXD1 115 aa8.93□□□□□ -0.98
TSPAN4-201ENST00000346501 LINC00575Q6W349 94 aa8.93□□□□□ -0.98
TSPAN4-201ENST00000346501 H7C2G1 150 aa8.92□□□□□ -0.98
TSPAN4-201ENST00000346501 CD164Q04900 197 aa8.92□□□□□ -0.98
TSPAN4-201ENST00000346501 LPAP08519 4548 aa8.91□□□□□ -0.98
TSPAN4-201ENST00000346501 A0A0U1RQV1 116 aa8.9□□□□□ -0.98
TSPAN4-201ENST00000346501 Q6ZQY7 126 aa8.9□□□□□ -0.98
TSPAN4-201ENST00000346501 A0A0B4J2C4 111 aa8.88□□□□□ -0.99
TSPAN4-201ENST00000346501 CFC1BP0CG36 223 aa8.88□□□□□ -0.99
TSPAN4-201ENST00000346501 CFC1P0CG37 223 aa8.88□□□□□ -0.99
TSPAN4-201ENST00000346501 LINC01547P58512 204 aaPredicted RBP8.88□□□□□ -0.99
TSPAN4-201ENST00000346501 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms