RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 CHTF8P0CG12 524 aa11.48□□□□□ -0.57
SPAST-202ENST00000345662 ACANP16112 2415 aa11.48□□□□□ -0.57
SPAST-202ENST00000345662 DNAH12Q6ZR08 3092 aa11.48□□□□□ -0.57
SPAST-202ENST00000345662 MIR22HGQ0VDD5 57 aa11.48□□□□□ -0.57
SPAST-202ENST00000345662 OCR1Q9BZK8 76 aa11.48□□□□□ -0.57
SPAST-202ENST00000345662 MDFIQ99750 246 aa11.47□□□□□ -0.57
SPAST-202ENST00000345662 A0A1W2PNM2 257 aa11.47□□□□□ -0.57
SPAST-202ENST00000345662 Q1T7F1 81 aa11.47□□□□□ -0.57
SPAST-202ENST00000345662 Q5XG85 94 aa11.46□□□□□ -0.58
SPAST-202ENST00000345662 LINC00612Q8N6U2 182 aa11.46□□□□□ -0.58
SPAST-202ENST00000345662 SPINT4Q6UDR6 99 aa11.45□□□□□ -0.58
SPAST-202ENST00000345662 CDC42SE1Q9NRR8 79 aa11.44□□□□□ -0.58
SPAST-202ENST00000345662 A0A0G2JQZ4 141 aa11.43□□□□□ -0.58
SPAST-202ENST00000345662 A0A1W2PNN7 141 aa11.43□□□□□ -0.58
SPAST-202ENST00000345662 PLA2G2DQ9UNK4 145 aa11.42□□□□□ -0.58
SPAST-202ENST00000345662 A0A1B0GVX0 72 aa11.42□□□□□ -0.58
SPAST-202ENST00000345662 C19orf73Q9NVV2 129 aa11.41□□□□□ -0.58
SPAST-202ENST00000345662 IGLV5-48A0A075B6I7 105 aa11.4□□□□□ -0.58
SPAST-202ENST00000345662 TLX1NBP0CAT3 122 aa11.4□□□□□ -0.58
SPAST-202ENST00000345662 FAM104AQ969W3 186 aa11.4□□□□□ -0.58
SPAST-202ENST00000345662 F8P00451 2351 aa11.4□□□□□ -0.59
SPAST-202ENST00000345662 SSBP3-AS1Q7Z2R9 100 aa11.39□□□□□ -0.59
SPAST-202ENST00000345662 CYSTM1Q9H1C7 97 aa11.38□□□□□ -0.59
SPAST-202ENST00000345662 NBDYA0A0U1RRE5 68 aa11.37□□□□□ -0.59
SPAST-202ENST00000345662 RTL8CO15255 209 aa11.37□□□□□ -0.59
SPAST-202ENST00000345662 Q96NJ1 140 aa11.35□□□□□ -0.59
SPAST-202ENST00000345662 A0A096LNT2 108 aa11.35□□□□□ -0.59
SPAST-202ENST00000345662 CEP350Q5VT06 3117 aa11.33□□□□□ -0.6
SPAST-202ENST00000345662 FP248Q71RG6 208 aaPredicted RBP11.33□□□□□ -0.6
SPAST-202ENST00000345662 DSCR10P59022 87 aa11.3□□□□□ -0.6
SPAST-202ENST00000345662 TYMSOSQ8TAI1 123 aa11.3□□□□□ -0.6
SPAST-202ENST00000345662 FAM229BQ4G0N7 80 aa11.26□□□□□ -0.61
SPAST-202ENST00000345662 SPRR4Q96PI1 79 aa11.24□□□□□ -0.61
SPAST-202ENST00000345662 FASNP49327 2511 aaKnown RBP11.24□□□□□ -0.61
SPAST-202ENST00000345662 RBM12B-AS1Q9P1G2 102 aa11.24□□□□□ -0.61
SPAST-202ENST00000345662 Q75L30 129 aa11.22□□□□□ -0.61
SPAST-202ENST00000345662 IGLV5-37A0A075B6J1 123 aa11.21□□□□□ -0.62
SPAST-202ENST00000345662 ZNF861PO60384 105 aa11.2□□□□□ -0.62
SPAST-202ENST00000345662 BPTFQ12830 3046 aa11.2□□□□□ -0.62
SPAST-202ENST00000345662 IGLV7-46A0A075B6I9 117 aa11.19□□□□□ -0.62
SPAST-202ENST00000345662 PRR26Q8N8Z3 221 aa11.19□□□□□ -0.62
SPAST-202ENST00000345662 CRIPTQ9P021 101 aa11.18□□□□□ -0.62
SPAST-202ENST00000345662 OXTP01178 125 aa11.18□□□□□ -0.62
SPAST-202ENST00000345662 KRTAP24-1Q3LI83 254 aa11.17□□□□□ -0.62
SPAST-202ENST00000345662 C9orf163Q8N9P6 203 aa11.17□□□□□ -0.62
SPAST-202ENST00000345662 Q8N9P0 234 aaPredicted RBP11.16□□□□□ -0.62
SPAST-202ENST00000345662 CR1P17927 2039 aa11.14□□□□□ -0.63
SPAST-202ENST00000345662 CASC10Q5T4H9 136 aa11.13□□□□□ -0.63
SPAST-202ENST00000345662 PLA2G1BP04054 148 aaKnown RBP11.12□□□□□ -0.63
SPAST-202ENST00000345662 EPG5Q9HCE0 2579 aa11.11□□□□□ -0.63
SPAST-202ENST00000345662 CNBPP62633 177 aaKnown RBP11.1□□□□□ -0.63
SPAST-202ENST00000345662 ANAPC11Q9NYG5 84 aa11.1□□□□□ -0.63
SPAST-202ENST00000345662 APLNQ9ULZ1 77 aa11.1□□□□□ -0.63
SPAST-202ENST00000345662 LINC01558Q9Y6Z2 57 aa11.1□□□□□ -0.63
SPAST-202ENST00000345662 KRTAP10-11P60412 298 aa11.09□□□□□ -0.63
SPAST-202ENST00000345662 KRTAP10-3P60369 221 aa11.08□□□□□ -0.64
SPAST-202ENST00000345662 Q8NDZ9 215 aa11.07□□□□□ -0.64
SPAST-202ENST00000345662 Q5VV11 94 aa11.07□□□□□ -0.64
SPAST-202ENST00000345662 A0A0C4DFX4 3053 aa11.07□□□□□ -0.64
SPAST-202ENST00000345662 USP24Q9UPU5 2620 aa11.05□□□□□ -0.64
SPAST-202ENST00000345662 PCNTO95613 3336 aa11.05□□□□□ -0.64
SPAST-202ENST00000345662 LINC01554Q52M75 96 aa11.05□□□□□ -0.64
SPAST-202ENST00000345662 PSORS1C2Q9UIG4 136 aa11.03□□□□□ -0.64
SPAST-202ENST00000345662 CHD7Q9P2D1 2997 aa11.01□□□□□ -0.65
SPAST-202ENST00000345662 IGLV7-43P04211 117 aa11□□□□□ -0.65
SPAST-202ENST00000345662 A0A087WTM6 91 aa10.99□□□□□ -0.65
SPAST-202ENST00000345662 Q8N1X5 172 aa10.99□□□□□ -0.65
SPAST-202ENST00000345662 LINC00304Q8N9R0 145 aa10.98□□□□□ -0.65
SPAST-202ENST00000345662 MMP24-AS1A0A0U1RRL7 71 aa10.97□□□□□ -0.65
SPAST-202ENST00000345662 K7EIL1 84 aa10.96□□□□□ -0.65
SPAST-202ENST00000345662 HRES1P13985 223 aa10.96□□□□□ -0.66
SPAST-202ENST00000345662 UTRNP46939 3433 aa10.95□□□□□ -0.66
SPAST-202ENST00000345662 PRAC1Q96KF2 57 aa10.95□□□□□ -0.66
SPAST-202ENST00000345662 SPRR1AP35321 89 aa10.94□□□□□ -0.66
SPAST-202ENST00000345662 C5orf42Q9H799 3197 aa10.93□□□□□ -0.66
SPAST-202ENST00000345662 C9orf92A6NGG3 77 aa10.93□□□□□ -0.66
SPAST-202ENST00000345662 H3BS24 57 aa10.91□□□□□ -0.66
SPAST-202ENST00000345662 MGAM2Q2M2H8 2515 aa10.89□□□□□ -0.67
SPAST-202ENST00000345662 A0A0D9SG42 100 aa10.89□□□□□ -0.67
SPAST-202ENST00000345662 SPINK7P58062 85 aa10.88□□□□□ -0.67
SPAST-202ENST00000345662 A0A1B0GU33 70 aa10.85□□□□□ -0.67
SPAST-202ENST00000345662 FLNAP21333 2647 aaKnown RBP10.85□□□□□ -0.67
SPAST-202ENST00000345662 LINC00472Q9H8W2 130 aa10.84□□□□□ -0.67
SPAST-202ENST00000345662 KRTAP1-3Q8IUG1 177 aa10.84□□□□□ -0.67
SPAST-202ENST00000345662 HECTD1Q9ULT8 2610 aa10.83□□□□□ -0.68
SPAST-202ENST00000345662 FLNBO75369 2602 aaKnown RBP10.81□□□□□ -0.68
SPAST-202ENST00000345662 CHD9Q3L8U1 2897 aa10.8□□□□□ -0.68
SPAST-202ENST00000345662 CSAG1Q6PB30 78 aa10.78□□□□□ -0.68
SPAST-202ENST00000345662 SPRR1BP22528 89 aa10.78□□□□□ -0.68
SPAST-202ENST00000345662 KRTAP1-1Q07627 177 aa10.77□□□□□ -0.68
SPAST-202ENST00000345662 CFAP54Q96N23 3096 aa10.77□□□□□ -0.69
SPAST-202ENST00000345662 ATRQ13535 2644 aa10.75□□□□□ -0.69
SPAST-202ENST00000345662 ITPR3Q14573 2671 aa10.74□□□□□ -0.69
SPAST-202ENST00000345662 WWC2-AS2Q96NR7 200 aa10.73□□□□□ -0.69
SPAST-202ENST00000345662 TNP2Q05952 138 aa10.72□□□□□ -0.69
SPAST-202ENST00000345662 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.71□□□□□ -0.69
SPAST-202ENST00000345662 Q5W150 140 aa10.7□□□□□ -0.7
SPAST-202ENST00000345662 CENPEQ02224 2701 aa10.69□□□□□ -0.7
SPAST-202ENST00000345662 LUZP6Q538Z0 58 aa10.69□□□□□ -0.7
SPAST-202ENST00000345662 ZCCHC13Q8WW36 166 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms