RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 C16orf90A8MZG2 172 aa14.33□□□□□ -0.12
PDLIM2-203ENST00000339162 LY6G6CO95867 125 aa14.33□□□□□ -0.12
PDLIM2-203ENST00000339162 IGLV5-37A0A075B6J1 123 aa14.33□□□□□ -0.12
PDLIM2-203ENST00000339162 KCNQ1DNQ9H478 68 aa14.33□□□□□ -0.12
PDLIM2-203ENST00000339162 CHTF8P0CG12 524 aa14.32□□□□□ -0.12
PDLIM2-203ENST00000339162 Q6ZQY7 126 aa14.32□□□□□ -0.12
PDLIM2-203ENST00000339162 NDUFV3P56181 108 aaKnown RBP14.31□□□□□ -0.12
PDLIM2-203ENST00000339162 Q6ZR54 194 aa14.31□□□□□ -0.12
PDLIM2-203ENST00000339162 MRPL55Q7Z7F7 128 aaKnown RBP14.31□□□□□ -0.12
PDLIM2-203ENST00000339162 IGLV1-50A0A075B6I6 118 aa14.3□□□□□ -0.12
PDLIM2-203ENST00000339162 WWC2-AS2Q96NR7 200 aa14.3□□□□□ -0.12
PDLIM2-203ENST00000339162 A0A1W2PNN7 141 aa14.3□□□□□ -0.12
PDLIM2-203ENST00000339162 TRBV7-6A0A0J9YX20 115 aa14.29□□□□□ -0.12
PDLIM2-203ENST00000339162 FUSP35637 526 aaKnown RBP eCLIP14.29□□□□□ -0.12
PDLIM2-203ENST00000339162 C14orf132Q9NPU4 83 aa14.29□□□□□ -0.12
PDLIM2-203ENST00000339162 LINC00528Q8N1L1 170 aa14.29□□□□□ -0.12
PDLIM2-203ENST00000339162 C9orf163Q8N9P6 203 aa14.29□□□□□ -0.12
PDLIM2-203ENST00000339162 TMEM256-PLSCR3K7ERE1 68 aa14.28□□□□□ -0.12
PDLIM2-203ENST00000339162 DNAH2Q9P225 4427 aa14.28□□□□□ -0.12
PDLIM2-203ENST00000339162 ACYP1P07311 99 aa14.27□□□□□ -0.13
PDLIM2-203ENST00000339162 A0A087WTM6 91 aa14.26□□□□□ -0.13
PDLIM2-203ENST00000339162 OBSCN-AS1Q96MR7 158 aa14.25□□□□□ -0.13
PDLIM2-203ENST00000339162 INAFM2P0DMQ5 153 aa14.24□□□□□ -0.13
PDLIM2-203ENST00000339162 SDIM1Q6ZPB5 146 aa14.23□□□□□ -0.13
PDLIM2-203ENST00000339162 TRBV7-7A0A0K0K1E9 115 aa14.22□□□□□ -0.13
PDLIM2-203ENST00000339162 PRYO14603 147 aa14.22□□□□□ -0.13
PDLIM2-203ENST00000339162 GAGE2AQ6NT46 116 aa14.21□□□□□ -0.13
PDLIM2-203ENST00000339162 KRTAP4-16G5E9R7 235 aaPredicted RBP14.21□□□□□ -0.14
PDLIM2-203ENST00000339162 PANO1I0J062 215 aa14.21□□□□□ -0.14
PDLIM2-203ENST00000339162 LINC00476Q8WZB0 136 aa14.21□□□□□ -0.14
PDLIM2-203ENST00000339162 C1orf134Q5TEV5 83 aa14.2□□□□□ -0.14
PDLIM2-203ENST00000339162 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.19□□□□□ -0.14
PDLIM2-203ENST00000339162 SPRR1AP35321 89 aa14.19□□□□□ -0.14
PDLIM2-203ENST00000339162 ETDCA0A1B0GVM5 59 aa14.18□□□□□ -0.14
PDLIM2-203ENST00000339162 LAMTOR3Q9UHA4 124 aa14.18□□□□□ -0.14
PDLIM2-203ENST00000339162 B5MCH6 92 aa14.18□□□□□ -0.14
PDLIM2-203ENST00000339162 Q6ZRX8 168 aa14.18□□□□□ -0.14
PDLIM2-203ENST00000339162 PHF5AQ7RTV0 110 aaKnown RBP14.17□□□□□ -0.14
PDLIM2-203ENST00000339162 Q9BRP9 147 aa14.17□□□□□ -0.14
PDLIM2-203ENST00000339162 IMUPQ9GZP8 106 aa14.16□□□□□ -0.14
PDLIM2-203ENST00000339162 JMJD7-PLA2G4BH0Y9G9 81 aa14.15□□□□□ -0.14
PDLIM2-203ENST00000339162 REG3GQ6UW15 175 aa14.15□□□□□ -0.14
PDLIM2-203ENST00000339162 DPH3Q96FX2 82 aa14.15□□□□□ -0.14
PDLIM2-203ENST00000339162 LINC00643Q86TS7 51 aa14.13□□□□□ -0.15
PDLIM2-203ENST00000339162 KRTAP11-1Q8IUC1 163 aa14.13□□□□□ -0.15
PDLIM2-203ENST00000339162 DEFB105AQ8NG35 78 aa14.13□□□□□ -0.15
PDLIM2-203ENST00000339162 RTL8CO15255 209 aa14.12□□□□□ -0.15
PDLIM2-203ENST00000339162 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.12□□□□□ -0.15
PDLIM2-203ENST00000339162 CCDC179H3BU77 68 aa14.11□□□□□ -0.15
PDLIM2-203ENST00000339162 SMCR5Q8TEV8 140 aa14.11□□□□□ -0.15
PDLIM2-203ENST00000339162 HECTD4Q9Y4D8 3996 aa14.11□□□□□ -0.15
PDLIM2-203ENST00000339162 RBM3P98179 157 aaKnown RBP14.1□□□□□ -0.15
PDLIM2-203ENST00000339162 UBE2BP63146 152 aa14.09□□□□□ -0.15
PDLIM2-203ENST00000339162 DHRS4-AS1Q9P1J3 65 aa14.09□□□□□ -0.15
PDLIM2-203ENST00000339162 ERC2-IT1O76042 136 aa14.09□□□□□ -0.15
PDLIM2-203ENST00000339162 LINC00474Q9P2X8 69 aa14.09□□□□□ -0.15
PDLIM2-203ENST00000339162 PKIGQ9Y2B9 76 aa14.09□□□□□ -0.15
PDLIM2-203ENST00000339162 TNP2Q05952 138 aa14.08□□□□□ -0.16
PDLIM2-203ENST00000339162 ST20-AS1Q8NBB2 130 aa14.07□□□□□ -0.16
PDLIM2-203ENST00000339162 C3orf84H3BNL1 204 aa14.07□□□□□ -0.16
PDLIM2-203ENST00000339162 PRLHP81277 87 aa14.07□□□□□ -0.16
PDLIM2-203ENST00000339162 CCKP06307 115 aa14.06□□□□□ -0.16
PDLIM2-203ENST00000339162 H3BQ85 93 aa14.06□□□□□ -0.16
PDLIM2-203ENST00000339162 FAM19A1Q7Z5A9 133 aa14.06□□□□□ -0.16
PDLIM2-203ENST00000339162 SS18L2Q9UHA2 77 aa14.06□□□□□ -0.16
PDLIM2-203ENST00000339162 SPACA4Q8TDM5 124 aa14.05□□□□□ -0.16
PDLIM2-203ENST00000339162 GHRHP01286 108 aa14.05□□□□□ -0.16
PDLIM2-203ENST00000339162 Q8N377 158 aa14.04□□□□□ -0.16
PDLIM2-203ENST00000339162 HYDINQ4G0P3 5121 aa14.04□□□□□ -0.16
PDLIM2-203ENST00000339162 IGLV5-52A0A0A0MRZ9 124 aa14.03□□□□□ -0.16
PDLIM2-203ENST00000339162 DNAH17Q9UFH2 4485 aa14.03□□□□□ -0.16
PDLIM2-203ENST00000339162 LINC01547P58512 204 aaPredicted RBP14.03□□□□□ -0.16
PDLIM2-203ENST00000339162 LINC00846Q9NV44 126 aa14.03□□□□□ -0.16
PDLIM2-203ENST00000339162 C3orf22Q8N5N4 141 aa14.02□□□□□ -0.16
PDLIM2-203ENST00000339162 DSCR8Q96T75 97 aa14.02□□□□□ -0.17
PDLIM2-203ENST00000339162 Q6ZQT0 140 aa14.01□□□□□ -0.17
PDLIM2-203ENST00000339162 ALMS1Q8TCU4 4167 aa14.01□□□□□ -0.17
PDLIM2-203ENST00000339162 FAM236AA0A1B0GUQ0 79 aa14□□□□□ -0.17
PDLIM2-203ENST00000339162 FAM236BA0A1B0GV22 79 aa14□□□□□ -0.17
PDLIM2-203ENST00000339162 HIGD2AQ9BW72 106 aa13.99□□□□□ -0.17
PDLIM2-203ENST00000339162 DNAH6Q9C0G6 4158 aa13.99□□□□□ -0.17
PDLIM2-203ENST00000339162 LOC110117498A0A087WWA1 95 aa13.98□□□□□ -0.17
PDLIM2-203ENST00000339162 SRRM2Q9UQ35 2752 aaKnown RBP13.97□□□□□ -0.17
PDLIM2-203ENST00000339162 TRBV7-4A0A0J9YYF1 115 aa13.94□□□□□ -0.18
PDLIM2-203ENST00000339162 KRTAP10-2P60368 255 aa13.94□□□□□ -0.18
PDLIM2-203ENST00000339162 FRAS1Q86XX4 4008 aa13.94□□□□□ -0.18
PDLIM2-203ENST00000339162 IGLV5-48A0A075B6I7 105 aa13.93□□□□□ -0.18
PDLIM2-203ENST00000339162 EPM2AB3EWF7 344 aa13.93□□□□□ -0.18
PDLIM2-203ENST00000339162 UBE2AP49459 152 aa13.89□□□□□ -0.19
PDLIM2-203ENST00000339162 PDE6GP18545 87 aa13.88□□□□□ -0.19
PDLIM2-203ENST00000339162 HIST1H4AP62805 103 aaKnown RBP13.87□□□□□ -0.19
PDLIM2-203ENST00000339162 DNAH11Q96DT5 4516 aa13.86□□□□□ -0.19
PDLIM2-203ENST00000339162 BCE1O60756 84 aa13.86□□□□□ -0.19
PDLIM2-203ENST00000339162 Q6JHZ5 121 aa13.86□□□□□ -0.19
PDLIM2-203ENST00000339162 PLAC8Q9NZF1 115 aa13.86□□□□□ -0.19
PDLIM2-203ENST00000339162 IGKV3D-7A0A0C4DH55 119 aa13.85□□□□□ -0.19
PDLIM2-203ENST00000339162 UQCRQO14949 82 aa13.84□□□□□ -0.19
PDLIM2-203ENST00000339162 SMIM29Q86T20 159 aa13.84□□□□□ -0.19
PDLIM2-203ENST00000339162 H0Y9J4 135 aa13.84□□□□□ -0.19
PDLIM2-203ENST00000339162 DNAH8Q96JB1 4490 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms