RNA–Protein interactions for RNA: ENST00000336604.8

IFFO1-201, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFFO1, Length 2,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-201ENST00000336604 M0R378 163 aa11.73□□□□□ -0.53
IFFO1-201ENST00000336604 EPM2AB3EWF7 344 aa11.73□□□□□ -0.53
IFFO1-201ENST00000336604 MRAPQ8TCY5 172 aa11.73□□□□□ -0.53
IFFO1-201ENST00000336604 F8P00451 2351 aa11.72□□□□□ -0.53
IFFO1-201ENST00000336604 FP248Q71RG6 208 aaPredicted RBP11.72□□□□□ -0.53
IFFO1-201ENST00000336604 LINC00474Q9P2X8 69 aa11.72□□□□□ -0.53
IFFO1-201ENST00000336604 FLNBO75369 2602 aaKnown RBP11.71□□□□□ -0.53
IFFO1-201ENST00000336604 CMYA5Q8N3K9 4069 aa11.71□□□□□ -0.53
IFFO1-201ENST00000336604 PDE6GP18545 87 aa11.71□□□□□ -0.53
IFFO1-201ENST00000336604 TRBV7-4A0A0J9YYF1 115 aa11.71□□□□□ -0.54
IFFO1-201ENST00000336604 H3BQ85 93 aa11.71□□□□□ -0.54
IFFO1-201ENST00000336604 NOTCH1P46531 2555 aa11.7□□□□□ -0.54
IFFO1-201ENST00000336604 TRBV7-6A0A0J9YX20 115 aa11.7□□□□□ -0.54
IFFO1-201ENST00000336604 LINC00528Q8N1L1 170 aa11.7□□□□□ -0.54
IFFO1-201ENST00000336604 PRO0628Q9UI54 55 aa11.7□□□□□ -0.54
IFFO1-201ENST00000336604 MAST4O15021 2626 aa11.69□□□□□ -0.54
IFFO1-201ENST00000336604 DEFB131BA0A096LNP1 70 aa11.69□□□□□ -0.54
IFFO1-201ENST00000336604 BCE1O60756 84 aa11.69□□□□□ -0.54
IFFO1-201ENST00000336604 CXCL6P80162 114 aa11.69□□□□□ -0.54
IFFO1-201ENST00000336604 LINC01556Q5JQF7 62 aa11.69□□□□□ -0.54
IFFO1-201ENST00000336604 SMIM26A0A096LP01 95 aa11.67□□□□□ -0.54
IFFO1-201ENST00000336604 Q8N9L7 120 aa11.67□□□□□ -0.54
IFFO1-201ENST00000336604 SYCNQ0VAF6 134 aa11.66□□□□□ -0.54
IFFO1-201ENST00000336604 C11orf45Q8TAV5 145 aa11.66□□□□□ -0.54
IFFO1-201ENST00000336604 PKIGQ9Y2B9 76 aa11.66□□□□□ -0.54
IFFO1-201ENST00000336604 NREPQ16612 68 aa11.64□□□□□ -0.55
IFFO1-201ENST00000336604 SERTAD4-AS1Q5TG53 156 aa11.64□□□□□ -0.55
IFFO1-201ENST00000336604 BPY2O14599 106 aa11.62□□□□□ -0.55
IFFO1-201ENST00000336604 NKAPP1Q8N9T2 125 aa11.61□□□□□ -0.55
IFFO1-201ENST00000336604 TMEM254Q8TBM7 123 aa11.61□□□□□ -0.55
IFFO1-201ENST00000336604 KRTAP24-1Q3LI83 254 aa11.61□□□□□ -0.55
IFFO1-201ENST00000336604 MPLKIPQ8TAP9 179 aa11.6□□□□□ -0.55
IFFO1-201ENST00000336604 C7orf33Q8WU49 177 aa11.6□□□□□ -0.55
IFFO1-201ENST00000336604 BRK1Q8WUW1 75 aa11.6□□□□□ -0.55
IFFO1-201ENST00000336604 NDUFC1O43677 76 aa11.59□□□□□ -0.55
IFFO1-201ENST00000336604 DEFB105AQ8NG35 78 aa11.59□□□□□ -0.55
IFFO1-201ENST00000336604 DNAH3Q8TD57 4116 aa11.58□□□□□ -0.56
IFFO1-201ENST00000336604 DNAH10OSP0CZ25 163 aa11.58□□□□□ -0.56
IFFO1-201ENST00000336604 FAM229BQ4G0N7 80 aa11.58□□□□□ -0.56
IFFO1-201ENST00000336604 KCNQ1DNQ9H478 68 aa11.58□□□□□ -0.56
IFFO1-201ENST00000336604 CASC10Q5T4H9 136 aa11.57□□□□□ -0.56
IFFO1-201ENST00000336604 NBEAL1Q6ZS30 2694 aa11.57□□□□□ -0.56
IFFO1-201ENST00000336604 A0A0U1RQV1 116 aa11.56□□□□□ -0.56
IFFO1-201ENST00000336604 FAM168BA1KXE4 195 aa11.56□□□□□ -0.56
IFFO1-201ENST00000336604 RPL37AP8A6NKH3 93 aa11.56□□□□□ -0.56
IFFO1-201ENST00000336604 F8WDY8 70 aa11.56□□□□□ -0.56
IFFO1-201ENST00000336604 DNAH1Q9P2D7 4330 aa11.55□□□□□ -0.56
IFFO1-201ENST00000336604 BAHCC1Q9P281 2608 aa11.54□□□□□ -0.56
IFFO1-201ENST00000336604 Q8N377 158 aa11.53□□□□□ -0.56
IFFO1-201ENST00000336604 LINC00588Q9Y4M8 146 aa11.53□□□□□ -0.56
IFFO1-201ENST00000336604 PRB2P02812 416 aaPredicted RBP11.53□□□□□ -0.56
IFFO1-201ENST00000336604 C3orf84H3BNL1 204 aa11.53□□□□□ -0.56
IFFO1-201ENST00000336604 ATP5EP56381 51 aaPredicted RBP11.51□□□□□ -0.57
IFFO1-201ENST00000336604 IGKV4-1P06312 121 aa11.5□□□□□ -0.57
IFFO1-201ENST00000336604 TLX1NBP0CAT3 122 aa11.5□□□□□ -0.57
IFFO1-201ENST00000336604 PRYO14603 147 aa11.5□□□□□ -0.57
IFFO1-201ENST00000336604 Q9BRP9 147 aa11.5□□□□□ -0.57
IFFO1-201ENST00000336604 COL6A5A8TX70 2615 aa11.49□□□□□ -0.57
IFFO1-201ENST00000336604 Q6ZRX8 168 aa11.49□□□□□ -0.57
IFFO1-201ENST00000336604 HIGD2AQ9BW72 106 aa11.49□□□□□ -0.57
IFFO1-201ENST00000336604 KRTAP7-1Q8IUC3 87 aa11.49□□□□□ -0.57
IFFO1-201ENST00000336604 LYSTQ99698 3801 aa11.47□□□□□ -0.57
IFFO1-201ENST00000336604 IGLV1-50A0A075B6I6 118 aa11.47□□□□□ -0.57
IFFO1-201ENST00000336604 KRTAP4-16G5E9R7 235 aaPredicted RBP11.47□□□□□ -0.57
IFFO1-201ENST00000336604 FUSP35637 526 aaKnown RBP eCLIP11.47□□□□□ -0.57
IFFO1-201ENST00000336604 HUWE1Q7Z6Z7 4374 aaKnown RBP11.47□□□□□ -0.57
IFFO1-201ENST00000336604 OCR1Q9BZK8 76 aa11.46□□□□□ -0.57
IFFO1-201ENST00000336604 IGLV5-48A0A075B6I7 105 aa11.46□□□□□ -0.58
IFFO1-201ENST00000336604 ST20-AS1Q8NBB2 130 aa11.46□□□□□ -0.58
IFFO1-201ENST00000336604 PLA2G2DQ9UNK4 145 aa11.46□□□□□ -0.58
IFFO1-201ENST00000336604 DHRS4-AS1Q9P1J3 65 aa11.45□□□□□ -0.58
IFFO1-201ENST00000336604 ETDCA0A1B0GVM5 59 aa11.44□□□□□ -0.58
IFFO1-201ENST00000336604 DNAH10Q8IVF4 4471 aa11.44□□□□□ -0.58
IFFO1-201ENST00000336604 ERC2-IT1O76042 136 aa11.43□□□□□ -0.58
IFFO1-201ENST00000336604 SPRR1AP35321 89 aa11.43□□□□□ -0.58
IFFO1-201ENST00000336604 LRCOL1A6NCL2 159 aa11.43□□□□□ -0.58
IFFO1-201ENST00000336604 FAM30AQ9NZY2 134 aa11.43□□□□□ -0.58
IFFO1-201ENST00000336604 IGLV5-37A0A075B6J1 123 aa11.42□□□□□ -0.58
IFFO1-201ENST00000336604 MRPL55Q7Z7F7 128 aaKnown RBP11.41□□□□□ -0.58
IFFO1-201ENST00000336604 A0A1W2PNM2 257 aa11.4□□□□□ -0.58
IFFO1-201ENST00000336604 SMIM29Q86T20 159 aa11.39□□□□□ -0.59
IFFO1-201ENST00000336604 TNP2Q05952 138 aa11.38□□□□□ -0.59
IFFO1-201ENST00000336604 C1orf137Q5JT78 98 aa11.38□□□□□ -0.59
IFFO1-201ENST00000336604 C1orf195Q5TG92 126 aa11.38□□□□□ -0.59
IFFO1-201ENST00000336604 UBE2BP63146 152 aa11.36□□□□□ -0.59
IFFO1-201ENST00000336604 MGAM2Q2M2H8 2515 aa11.36□□□□□ -0.59
IFFO1-201ENST00000336604 STAB2Q8WWQ8 2551 aa11.36□□□□□ -0.59
IFFO1-201ENST00000336604 K7EIL1 84 aa11.33□□□□□ -0.59
IFFO1-201ENST00000336604 DNAH9Q9NYC9 4486 aa11.33□□□□□ -0.6
IFFO1-201ENST00000336604 COL7A1Q02388 2944 aa11.33□□□□□ -0.6
IFFO1-201ENST00000336604 Q8NBF4 154 aa11.32□□□□□ -0.6
IFFO1-201ENST00000336604 CSMD3Q7Z407 3707 aa11.32□□□□□ -0.6
IFFO1-201ENST00000336604 REG3GQ6UW15 175 aa11.32□□□□□ -0.6
IFFO1-201ENST00000336604 KRTAP1-5Q9BYS1 174 aa11.31□□□□□ -0.6
IFFO1-201ENST00000336604 IGKV2-24A0A0C4DH68 120 aa11.3□□□□□ -0.6
IFFO1-201ENST00000336604 A0A0G2JQZ4 141 aa11.3□□□□□ -0.6
IFFO1-201ENST00000336604 A0A1W2PNN7 141 aa11.3□□□□□ -0.6
IFFO1-201ENST00000336604 PRR4Q16378 134 aa11.29□□□□□ -0.6
IFFO1-201ENST00000336604 A0A096LNI7 61 aa11.28□□□□□ -0.6
IFFO1-201ENST00000336604 SPRR4Q96PI1 79 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms