RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 NREPQ16612 68 aa11.08□□□□□ -0.64
CDC42EP4-201ENST00000335793 A8MU10 97 aa11.08□□□□□ -0.64
CDC42EP4-201ENST00000335793 A0A0J9YWU9 116 aa11.08□□□□□ -0.64
CDC42EP4-201ENST00000335793 ZNF73O43830 326 aaPredicted RBP11.08□□□□□ -0.64
CDC42EP4-201ENST00000335793 COX7BP24311 80 aa11.08□□□□□ -0.64
CDC42EP4-201ENST00000335793 FUSP35637 526 aaKnown RBP eCLIP11.08□□□□□ -0.64
CDC42EP4-201ENST00000335793 KPRPQ5T749 579 aaPredicted RBP11.07□□□□□ -0.64
CDC42EP4-201ENST00000335793 IGKV2D-24A0A075B6R9 120 aa11.07□□□□□ -0.64
CDC42EP4-201ENST00000335793 OXLD1Q5BKU9 147 aa11.07□□□□□ -0.64
CDC42EP4-201ENST00000335793 TRRAPQ9Y4A5 3859 aa11.07□□□□□ -0.64
CDC42EP4-201ENST00000335793 Q6ZQT0 140 aa11.06□□□□□ -0.64
CDC42EP4-201ENST00000335793 IGLV6-57P01721 117 aa11.05□□□□□ -0.64
CDC42EP4-201ENST00000335793 HIGD2AQ9BW72 106 aa11.05□□□□□ -0.64
CDC42EP4-201ENST00000335793 PRR34Q9NV39 138 aa11.04□□□□□ -0.64
CDC42EP4-201ENST00000335793 DEFB105AQ8NG35 78 aa11.04□□□□□ -0.64
CDC42EP4-201ENST00000335793 BPY2O14599 106 aa11.03□□□□□ -0.64
CDC42EP4-201ENST00000335793 Q6ZTC4 211 aa11.03□□□□□ -0.64
CDC42EP4-201ENST00000335793 Q6ZRU5 148 aa11.03□□□□□ -0.64
CDC42EP4-201ENST00000335793 NOTCH1P46531 2555 aa11.02□□□□□ -0.64
CDC42EP4-201ENST00000335793 PKD1L1Q8TDX9 2849 aa11.02□□□□□ -0.64
CDC42EP4-201ENST00000335793 TRBV7-4A0A0J9YYF1 115 aa11.02□□□□□ -0.65
CDC42EP4-201ENST00000335793 NDUFC1O43677 76 aa11.01□□□□□ -0.65
CDC42EP4-201ENST00000335793 FBN1P35555 2871 aaKnown RBP11.01□□□□□ -0.65
CDC42EP4-201ENST00000335793 MUC7Q8TAX7 377 aa11.01□□□□□ -0.65
CDC42EP4-201ENST00000335793 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11□□□□□ -0.65
CDC42EP4-201ENST00000335793 PRYO14603 147 aa10.99□□□□□ -0.65
CDC42EP4-201ENST00000335793 MRPL55Q7Z7F7 128 aaKnown RBP10.99□□□□□ -0.65
CDC42EP4-201ENST00000335793 SPTSSBQ8NFR3 76 aa10.99□□□□□ -0.65
CDC42EP4-201ENST00000335793 PDE6GP18545 87 aa10.97□□□□□ -0.65
CDC42EP4-201ENST00000335793 NKAPP1Q8N9T2 125 aa10.97□□□□□ -0.65
CDC42EP4-201ENST00000335793 M0R378 163 aa10.96□□□□□ -0.65
CDC42EP4-201ENST00000335793 LOC110117498A0A087WWA1 95 aa10.96□□□□□ -0.66
CDC42EP4-201ENST00000335793 PRR15Q8IV56 129 aa10.96□□□□□ -0.66
CDC42EP4-201ENST00000335793 EGFEM1PQ0D2K5 195 aa10.96□□□□□ -0.66
CDC42EP4-201ENST00000335793 GVQW2A0A096LPI5 108 aaPredicted RBP10.95□□□□□ -0.66
CDC42EP4-201ENST00000335793 VPREB1P12018 145 aa10.94□□□□□ -0.66
CDC42EP4-201ENST00000335793 ATP5EP56381 51 aaPredicted RBP10.94□□□□□ -0.66
CDC42EP4-201ENST00000335793 Q6ZRP5 223 aa10.94□□□□□ -0.66
CDC42EP4-201ENST00000335793 ELOF1P60002 83 aaKnown RBP10.93□□□□□ -0.66
CDC42EP4-201ENST00000335793 CD164Q04900 197 aa10.93□□□□□ -0.66
CDC42EP4-201ENST00000335793 DEFB131BA0A096LNP1 70 aa10.93□□□□□ -0.66
CDC42EP4-201ENST00000335793 FAM30AQ9NZY2 134 aa10.93□□□□□ -0.66
CDC42EP4-201ENST00000335793 C3orf84H3BNL1 204 aa10.92□□□□□ -0.66
CDC42EP4-201ENST00000335793 H3BQ85 93 aa10.92□□□□□ -0.66
CDC42EP4-201ENST00000335793 SYCNQ0VAF6 134 aa10.92□□□□□ -0.66
CDC42EP4-201ENST00000335793 A8MUN3 132 aa10.9□□□□□ -0.66
CDC42EP4-201ENST00000335793 TENM3Q9P273 2699 aa10.9□□□□□ -0.66
CDC42EP4-201ENST00000335793 MGAM2Q2M2H8 2515 aa10.9□□□□□ -0.66
CDC42EP4-201ENST00000335793 RPL37AP8A6NKH3 93 aa10.9□□□□□ -0.67
CDC42EP4-201ENST00000335793 C15orf56Q8N910 161 aa10.9□□□□□ -0.67
CDC42EP4-201ENST00000335793 C11orf45Q8TAV5 145 aa10.89□□□□□ -0.67
CDC42EP4-201ENST00000335793 C1orf64Q8NEQ6 169 aa10.88□□□□□ -0.67
CDC42EP4-201ENST00000335793 NBEAL1Q6ZS30 2694 aa10.87□□□□□ -0.67
CDC42EP4-201ENST00000335793 TRAV22A0A0B4J277 110 aa10.87□□□□□ -0.67
CDC42EP4-201ENST00000335793 RBM12B-AS1Q9P1G2 102 aa10.87□□□□□ -0.67
CDC42EP4-201ENST00000335793 BCE1O60756 84 aa10.86□□□□□ -0.67
CDC42EP4-201ENST00000335793 CXCL6P80162 114 aa10.85□□□□□ -0.67
CDC42EP4-201ENST00000335793 KRTAP10-11P60412 298 aa10.85□□□□□ -0.67
CDC42EP4-201ENST00000335793 LINC00528Q8N1L1 170 aa10.85□□□□□ -0.67
CDC42EP4-201ENST00000335793 hDV103S1A0JD37 113 aa10.82□□□□□ -0.68
CDC42EP4-201ENST00000335793 SERTAD4-AS1Q5TG53 156 aa10.82□□□□□ -0.68
CDC42EP4-201ENST00000335793 ETDCA0A1B0GVM5 59 aa10.82□□□□□ -0.68
CDC42EP4-201ENST00000335793 C7orf33Q8WU49 177 aa10.82□□□□□ -0.68
CDC42EP4-201ENST00000335793 KRTAP26-1Q6PEX3 210 aa10.81□□□□□ -0.68
CDC42EP4-201ENST00000335793 H3BNG1 76 aa10.8□□□□□ -0.68
CDC42EP4-201ENST00000335793 CHKB-CPT1BH3BT56 60 aa10.8□□□□□ -0.68
CDC42EP4-201ENST00000335793 LINC01556Q5JQF7 62 aa10.8□□□□□ -0.68
CDC42EP4-201ENST00000335793 C4orf48Q5BLP8 95 aa10.78□□□□□ -0.68
CDC42EP4-201ENST00000335793 FAM168BA1KXE4 195 aa10.78□□□□□ -0.68
CDC42EP4-201ENST00000335793 UBE2BP63146 152 aa10.78□□□□□ -0.68
CDC42EP4-201ENST00000335793 SMIM29Q86T20 159 aa10.77□□□□□ -0.68
CDC42EP4-201ENST00000335793 OCR1Q9BZK8 76 aa10.77□□□□□ -0.68
CDC42EP4-201ENST00000335793 IGKV4-1P06312 121 aa10.74□□□□□ -0.69
CDC42EP4-201ENST00000335793 CASC10Q5T4H9 136 aa10.74□□□□□ -0.69
CDC42EP4-201ENST00000335793 Q8N377 158 aa10.74□□□□□ -0.69
CDC42EP4-201ENST00000335793 ST20-AS1Q8NBB2 130 aa10.73□□□□□ -0.69
CDC42EP4-201ENST00000335793 Q1T7F1 81 aa10.73□□□□□ -0.69
CDC42EP4-201ENST00000335793 KRTAP24-1Q3LI83 254 aa10.72□□□□□ -0.69
CDC42EP4-201ENST00000335793 KCNQ1DNQ9H478 68 aa10.72□□□□□ -0.69
CDC42EP4-201ENST00000335793 C1orf137Q5JT78 98 aa10.71□□□□□ -0.7
CDC42EP4-201ENST00000335793 IGKV2-24A0A0C4DH68 120 aa10.7□□□□□ -0.7
CDC42EP4-201ENST00000335793 DHRS4-AS1Q9P1J3 65 aa10.7□□□□□ -0.7
CDC42EP4-201ENST00000335793 DEFB116Q30KQ4 102 aa10.7□□□□□ -0.7
CDC42EP4-201ENST00000335793 KTN1-AS1Q86SY8 53 aa10.69□□□□□ -0.7
CDC42EP4-201ENST00000335793 LINC00588Q9Y4M8 146 aa10.69□□□□□ -0.7
CDC42EP4-201ENST00000335793 Q6ZRX8 168 aa10.68□□□□□ -0.7
CDC42EP4-201ENST00000335793 C16orf90A8MZG2 172 aa10.67□□□□□ -0.7
CDC42EP4-201ENST00000335793 PRR15LQ9BU68 103 aa10.67□□□□□ -0.7
CDC42EP4-201ENST00000335793 DNAH10OSP0CZ25 163 aa10.67□□□□□ -0.7
CDC42EP4-201ENST00000335793 HCG22E2RYF7 251 aa10.66□□□□□ -0.7
CDC42EP4-201ENST00000335793 ERC2-IT1O76042 136 aa10.66□□□□□ -0.7
CDC42EP4-201ENST00000335793 PSCAO43653 123 aa10.65□□□□□ -0.7
CDC42EP4-201ENST00000335793 Q9BRP9 147 aa10.65□□□□□ -0.7
CDC42EP4-201ENST00000335793 A6NED7 52 aa10.64□□□□□ -0.71
CDC42EP4-201ENST00000335793 Q5VV11 94 aa10.64□□□□□ -0.71
CDC42EP4-201ENST00000335793 MDFIQ99750 246 aa10.64□□□□□ -0.71
CDC42EP4-201ENST00000335793 A0A0G2JQZ4 141 aa10.64□□□□□ -0.71
CDC42EP4-201ENST00000335793 A0A1W2PNN7 141 aa10.64□□□□□ -0.71
CDC42EP4-201ENST00000335793 IGLV1-50A0A075B6I6 118 aa10.63□□□□□ -0.71
CDC42EP4-201ENST00000335793 A0A1W2PNM2 257 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms