RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 C15orf56Q8N910 161 aa8.42□□□□□ -1.06
DDX39A-202ENST00000324340 LINC00476Q8WZB0 136 aa8.42□□□□□ -1.06
DDX39A-202ENST00000324340 A0A087WVE0 104 aa8.41□□□□□ -1.06
DDX39A-202ENST00000324340 SPAG11BQ08648 103 aa8.41□□□□□ -1.06
DDX39A-202ENST00000324340 Q6ZR54 194 aa8.41□□□□□ -1.06
DDX39A-202ENST00000324340 GVQW2A0A096LPI5 108 aaPredicted RBP8.4□□□□□ -1.06
DDX39A-202ENST00000324340 H7BZZ5 65 aa8.4□□□□□ -1.06
DDX39A-202ENST00000324340 PDE6GP18545 87 aa8.4□□□□□ -1.06
DDX39A-202ENST00000324340 MIR7-3HGQ8N6C7 128 aa8.4□□□□□ -1.06
DDX39A-202ENST00000324340 PLECQ15149 4684 aaKnown RBP8.4□□□□□ -1.07
DDX39A-202ENST00000324340 LECT2O14960 151 aa8.39□□□□□ -1.07
DDX39A-202ENST00000324340 KMT2CQ8NEZ4 4911 aaKnown RBP8.39□□□□□ -1.07
DDX39A-202ENST00000324340 ERC2-IT1O76042 136 aa8.38□□□□□ -1.07
DDX39A-202ENST00000324340 LY6G6CO95867 125 aa8.38□□□□□ -1.07
DDX39A-202ENST00000324340 Q6ZRN7 208 aaPredicted RBP8.38□□□□□ -1.07
DDX39A-202ENST00000324340 TENM2Q9NT68 2774 aa8.38□□□□□ -1.07
DDX39A-202ENST00000324340 LOC110117498A0A087WWA1 95 aa8.37□□□□□ -1.07
DDX39A-202ENST00000324340 ZNF561-AS1K7EIQ3 104 aa8.37□□□□□ -1.07
DDX39A-202ENST00000324340 C20orf197Q8N268 126 aa8.37□□□□□ -1.07
DDX39A-202ENST00000324340 NCR3O14931 201 aa8.36□□□□□ -1.07
DDX39A-202ENST00000324340 CXCL6P80162 114 aa8.36□□□□□ -1.07
DDX39A-202ENST00000324340 HIGD2BQ4VC39 106 aa8.36□□□□□ -1.07
DDX39A-202ENST00000324340 C9orf129Q5T035 196 aaKnown RBP8.36□□□□□ -1.07
DDX39A-202ENST00000324340 C6orf223Q8N319 242 aa8.36□□□□□ -1.07
DDX39A-202ENST00000324340 DNAH1Q9P2D7 4330 aa8.36□□□□□ -1.07
DDX39A-202ENST00000324340 A0A0U1RRA0 63 aa8.35□□□□□ -1.07
DDX39A-202ENST00000324340 VPS13DQ5THJ4 4388 aa8.35□□□□□ -1.07
DDX39A-202ENST00000324340 M0R2N4 97 aa8.35□□□□□ -1.07
DDX39A-202ENST00000324340 COX17Q14061 63 aa8.35□□□□□ -1.07
DDX39A-202ENST00000324340 C10orf25Q5T742 122 aa8.35□□□□□ -1.07
DDX39A-202ENST00000324340 UNQ6190/PRO20217Q6UXQ8 127 aa8.35□□□□□ -1.07
DDX39A-202ENST00000324340 LINC00336Q6ZUF6 198 aa8.35□□□□□ -1.07
DDX39A-202ENST00000324340 LYSTQ99698 3801 aa8.34□□□□□ -1.07
DDX39A-202ENST00000324340 TRAV23DV6A0A075B6W5 121 aa8.34□□□□□ -1.07
DDX39A-202ENST00000324340 PSCAO43653 123 aa8.34□□□□□ -1.07
DDX39A-202ENST00000324340 LINC00158P58513 81 aa8.34□□□□□ -1.07
DDX39A-202ENST00000324340 Q8N814 137 aa8.34□□□□□ -1.07
DDX39A-202ENST00000324340 CAMK2N2Q96S95 79 aa8.34□□□□□ -1.07
DDX39A-202ENST00000324340 LRCOL1A6NCL2 159 aa8.33□□□□□ -1.08
DDX39A-202ENST00000324340 C6orf48Q9UBA6 75 aa8.33□□□□□ -1.08
DDX39A-202ENST00000324340 LAMTOR3Q9UHA4 124 aa8.33□□□□□ -1.08
DDX39A-202ENST00000324340 Q6ZRU5 148 aa8.32□□□□□ -1.08
DDX39A-202ENST00000324340 RYR3Q15413 4870 aa8.32□□□□□ -1.08
DDX39A-202ENST00000324340 SLPIP03973 132 aa8.31□□□□□ -1.08
DDX39A-202ENST00000324340 SYCNQ0VAF6 134 aa8.31□□□□□ -1.08
DDX39A-202ENST00000324340 C14orf177Q52M58 125 aa8.31□□□□□ -1.08
DDX39A-202ENST00000324340 FAM19A1Q7Z5A9 133 aa8.31□□□□□ -1.08
DDX39A-202ENST00000324340 C9orf116Q5BN46 136 aaPredicted RBP8.3□□□□□ -1.08
DDX39A-202ENST00000324340 C1orf134Q5TEV5 83 aa8.3□□□□□ -1.08
DDX39A-202ENST00000324340 Q6ZQT0 140 aa8.29□□□□□ -1.08
DDX39A-202ENST00000324340 CNBPP62633 177 aaKnown RBP8.28□□□□□ -1.08
DDX39A-202ENST00000324340 FP248Q71RG6 208 aaPredicted RBP8.28□□□□□ -1.08
DDX39A-202ENST00000324340 ALMS1Q8TCU4 4167 aa8.28□□□□□ -1.08
DDX39A-202ENST00000324340 TLX1NBP0CAT3 122 aa8.27□□□□□ -1.09
DDX39A-202ENST00000324340 RBM3P98179 157 aaKnown RBP8.27□□□□□ -1.09
DDX39A-202ENST00000324340 TRBV7-6A0A0J9YX20 115 aa8.26□□□□□ -1.09
DDX39A-202ENST00000324340 LCE6AA0A183 80 aa8.26□□□□□ -1.09
DDX39A-202ENST00000324340 LINC01547P58512 204 aaPredicted RBP8.26□□□□□ -1.09
DDX39A-202ENST00000324340 A0A087WTM6 91 aa8.25□□□□□ -1.09
DDX39A-202ENST00000324340 V9GYY9 64 aa8.25□□□□□ -1.09
DDX39A-202ENST00000324340 F8WEM9 126 aa8.24□□□□□ -1.09
DDX39A-202ENST00000324340 DNAH6Q9C0G6 4158 aa8.23□□□□□ -1.09
DDX39A-202ENST00000324340 TRBV7-4A0A0J9YYF1 115 aa8.23□□□□□ -1.09
DDX39A-202ENST00000324340 C1orf195Q5TG92 126 aa8.23□□□□□ -1.09
DDX39A-202ENST00000324340 LINC00575Q6W349 94 aa8.23□□□□□ -1.09
DDX39A-202ENST00000324340 Q6ZVQ6 151 aa8.23□□□□□ -1.09
DDX39A-202ENST00000324340 RTL8CO15255 209 aa8.22□□□□□ -1.09
DDX39A-202ENST00000324340 Q6ZRP5 223 aa8.22□□□□□ -1.09
DDX39A-202ENST00000324340 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.21□□□□□ -1.1
DDX39A-202ENST00000324340 SEC61GP60059 68 aa8.2□□□□□ -1.1
DDX39A-202ENST00000324340 C9orf163Q8N9P6 203 aa8.2□□□□□ -1.1
DDX39A-202ENST00000324340 KMT2AQ03164 3969 aa8.19□□□□□ -1.1
DDX39A-202ENST00000324340 TNP2Q05952 138 aa8.18□□□□□ -1.1
DDX39A-202ENST00000324340 Q8NDZ9 215 aa8.18□□□□□ -1.1
DDX39A-202ENST00000324340 XAGE1AQ9HD64 81 aa8.18□□□□□ -1.1
DDX39A-202ENST00000324340 PKIGQ9Y2B9 76 aa8.18□□□□□ -1.1
DDX39A-202ENST00000324340 HAMPP81172 84 aa8.17□□□□□ -1.1
DDX39A-202ENST00000324340 TMEM254Q8TBM7 123 aa8.17□□□□□ -1.1
DDX39A-202ENST00000324340 DNAH10Q8IVF4 4471 aa8.17□□□□□ -1.1
DDX39A-202ENST00000324340 C16orf90A8MZG2 172 aa8.16□□□□□ -1.1
DDX39A-202ENST00000324340 NREPQ16612 68 aa8.16□□□□□ -1.1
DDX39A-202ENST00000324340 PLA2G2DQ9UNK4 145 aa8.16□□□□□ -1.1
DDX39A-202ENST00000324340 VPREB1P12018 145 aa8.15□□□□□ -1.1
DDX39A-202ENST00000324340 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.15□□□□□ -1.1
DDX39A-202ENST00000324340 SNURFQ9Y675 71 aa8.15□□□□□ -1.1
DDX39A-202ENST00000324340 A0A096LNI7 61 aa8.14□□□□□ -1.11
DDX39A-202ENST00000324340 A0A0U1RQV1 116 aa8.14□□□□□ -1.11
DDX39A-202ENST00000324340 PRR15Q8IV56 129 aa8.14□□□□□ -1.11
DDX39A-202ENST00000324340 BRK1Q8WUW1 75 aa8.14□□□□□ -1.11
DDX39A-202ENST00000324340 A0A1B0GW54 56 aa8.13□□□□□ -1.11
DDX39A-202ENST00000324340 PRYO14603 147 aa8.13□□□□□ -1.11
DDX39A-202ENST00000324340 PRR3P79522 188 aaKnown RBP8.13□□□□□ -1.11
DDX39A-202ENST00000324340 C6orf99Q4VX62 202 aa8.13□□□□□ -1.11
DDX39A-202ENST00000324340 HYDINQ4G0P3 5121 aa8.13□□□□□ -1.11
DDX39A-202ENST00000324340 IGLV5-37A0A075B6J1 123 aa8.12□□□□□ -1.11
DDX39A-202ENST00000324340 BPY2O14599 106 aa8.11□□□□□ -1.11
DDX39A-202ENST00000324340 FUSP35637 526 aaKnown RBP eCLIP8.11□□□□□ -1.11
DDX39A-202ENST00000324340 IGLV5-52A0A0A0MRZ9 124 aa8.1□□□□□ -1.11
DDX39A-202ENST00000324340 IGLV6-57P01721 117 aa8.1□□□□□ -1.11
DDX39A-202ENST00000324340 SERTAD4-AS1Q5TG53 156 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms