RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 LINC00528Q8N1L1 170 aa8.52□□□□□ -1.05
DNMT3A-202ENST00000321117 USP24Q9UPU5 2620 aa8.52□□□□□ -1.05
DNMT3A-202ENST00000321117 ATRQ13535 2644 aa8.52□□□□□ -1.05
DNMT3A-202ENST00000321117 DCHS2Q6V1P9 2916 aa8.51□□□□□ -1.05
DNMT3A-202ENST00000321117 SEC61GP60059 68 aa8.51□□□□□ -1.05
DNMT3A-202ENST00000321117 LINC01556Q5JQF7 62 aa8.5□□□□□ -1.05
DNMT3A-202ENST00000321117 Q6ZRP5 223 aa8.5□□□□□ -1.05
DNMT3A-202ENST00000321117 REG3GQ6UW15 175 aa8.49□□□□□ -1.05
DNMT3A-202ENST00000321117 LAMA5O15230 3695 aa8.49□□□□□ -1.05
DNMT3A-202ENST00000321117 HECTD1Q9ULT8 2610 aa8.49□□□□□ -1.05
DNMT3A-202ENST00000321117 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.49□□□□□ -1.05
DNMT3A-202ENST00000321117 H3BNG1 76 aa8.49□□□□□ -1.05
DNMT3A-202ENST00000321117 SMG1Q96Q15 3661 aaKnown RBP8.48□□□□□ -1.05
DNMT3A-202ENST00000321117 B9D2Q9BPU9 175 aa8.48□□□□□ -1.05
DNMT3A-202ENST00000321117 PMAIP1Q13794 54 aa8.48□□□□□ -1.05
DNMT3A-202ENST00000321117 Q8NDZ9 215 aa8.48□□□□□ -1.05
DNMT3A-202ENST00000321117 PSPHP1O15172 72 aa8.47□□□□□ -1.05
DNMT3A-202ENST00000321117 LINC00208Q96KT6 92 aa8.47□□□□□ -1.05
DNMT3A-202ENST00000321117 A0A1B0GW54 56 aa8.47□□□□□ -1.05
DNMT3A-202ENST00000321117 ERC2-IT1O76042 136 aa8.47□□□□□ -1.05
DNMT3A-202ENST00000321117 Q8NBF4 154 aa8.47□□□□□ -1.05
DNMT3A-202ENST00000321117 KRTAP10-3P60369 221 aa8.46□□□□□ -1.05
DNMT3A-202ENST00000321117 DEFB116Q30KQ4 102 aa8.46□□□□□ -1.05
DNMT3A-202ENST00000321117 Q6ZRX8 168 aa8.46□□□□□ -1.05
DNMT3A-202ENST00000321117 A0A087WSZ3 146 aa8.46□□□□□ -1.05
DNMT3A-202ENST00000321117 LINC00336Q6ZUF6 198 aa8.46□□□□□ -1.05
DNMT3A-202ENST00000321117 HCG22E2RYF7 251 aa8.46□□□□□ -1.06
DNMT3A-202ENST00000321117 C14orf177Q52M58 125 aa8.45□□□□□ -1.06
DNMT3A-202ENST00000321117 C4orf48Q5BLP8 95 aa8.45□□□□□ -1.06
DNMT3A-202ENST00000321117 A6NED7 52 aa8.45□□□□□ -1.06
DNMT3A-202ENST00000321117 RELNP78509 3460 aa8.44□□□□□ -1.06
DNMT3A-202ENST00000321117 LINC00474Q9P2X8 69 aa8.44□□□□□ -1.06
DNMT3A-202ENST00000321117 C15orf56Q8N910 161 aa8.43□□□□□ -1.06
DNMT3A-202ENST00000321117 ST20-AS1Q8NBB2 130 aa8.43□□□□□ -1.06
DNMT3A-202ENST00000321117 KCNQ1DNQ9H478 68 aa8.43□□□□□ -1.06
DNMT3A-202ENST00000321117 KRTAP1-1Q07627 177 aa8.42□□□□□ -1.06
DNMT3A-202ENST00000321117 SERTAD4-AS1Q5TG53 156 aa8.42□□□□□ -1.06
DNMT3A-202ENST00000321117 CASC2Q6XLA1 102 aa8.42□□□□□ -1.06
DNMT3A-202ENST00000321117 UTP20O75691 2785 aaKnown RBP8.42□□□□□ -1.06
DNMT3A-202ENST00000321117 PRLHP81277 87 aa8.41□□□□□ -1.06
DNMT3A-202ENST00000321117 UNC79Q9P2D8 2635 aa8.41□□□□□ -1.06
DNMT3A-202ENST00000321117 Q8N377 158 aa8.41□□□□□ -1.06
DNMT3A-202ENST00000321117 SETXQ7Z333 2677 aaKnown RBP8.41□□□□□ -1.06
DNMT3A-202ENST00000321117 CSMD1Q96PZ7 3565 aa8.41□□□□□ -1.06
DNMT3A-202ENST00000321117 MAST4O15021 2626 aa8.41□□□□□ -1.06
DNMT3A-202ENST00000321117 Q9BRP9 147 aa8.4□□□□□ -1.06
DNMT3A-202ENST00000321117 WIPF1O43516 503 aa8.39□□□□□ -1.07
DNMT3A-202ENST00000321117 K7ERS5 55 aa8.38□□□□□ -1.07
DNMT3A-202ENST00000321117 LINC00476Q8WZB0 136 aa8.38□□□□□ -1.07
DNMT3A-202ENST00000321117 PRR15LQ9BU68 103 aa8.38□□□□□ -1.07
DNMT3A-202ENST00000321117 FAM168BA1KXE4 195 aa8.37□□□□□ -1.07
DNMT3A-202ENST00000321117 OXTP01178 125 aa8.37□□□□□ -1.07
DNMT3A-202ENST00000321117 H0Y9P7 68 aa8.37□□□□□ -1.07
DNMT3A-202ENST00000321117 Q5XG85 94 aa8.37□□□□□ -1.07
DNMT3A-202ENST00000321117 K7EQZ3 153 aa8.36□□□□□ -1.07
DNMT3A-202ENST00000321117 MGAM2Q2M2H8 2515 aa8.35□□□□□ -1.07
DNMT3A-202ENST00000321117 IGLV1-50A0A075B6I6 118 aa8.34□□□□□ -1.07
DNMT3A-202ENST00000321117 hDV103S1A0JD37 113 aa8.34□□□□□ -1.07
DNMT3A-202ENST00000321117 DNAH10OSP0CZ25 163 aa8.34□□□□□ -1.07
DNMT3A-202ENST00000321117 A0A1W2PNM2 257 aa8.33□□□□□ -1.08
DNMT3A-202ENST00000321117 FBN2P35556 2912 aa8.32□□□□□ -1.08
DNMT3A-202ENST00000321117 OCR1Q9BZK8 76 aa8.32□□□□□ -1.08
DNMT3A-202ENST00000321117 CRYBG3Q68DQ2 2970 aa8.32□□□□□ -1.08
DNMT3A-202ENST00000321117 IGLV9-49A0A0B4J1Y8 123 aa8.32□□□□□ -1.08
DNMT3A-202ENST00000321117 NF1P21359 2839 aa8.32□□□□□ -1.08
DNMT3A-202ENST00000321117 IGLV5-48A0A075B6I7 105 aa8.31□□□□□ -1.08
DNMT3A-202ENST00000321117 LINC00588Q9Y4M8 146 aa8.31□□□□□ -1.08
DNMT3A-202ENST00000321117 HELZ2Q9BYK8 2649 aaKnown RBP8.31□□□□□ -1.08
DNMT3A-202ENST00000321117 MXRA5Q9NR99 2828 aa8.29□□□□□ -1.08
DNMT3A-202ENST00000321117 C1orf64Q8NEQ6 169 aa8.29□□□□□ -1.08
DNMT3A-202ENST00000321117 TLX1NBP0CAT3 122 aa8.28□□□□□ -1.08
DNMT3A-202ENST00000321117 RPL37AP61513 92 aaKnown RBP8.28□□□□□ -1.08
DNMT3A-202ENST00000321117 PCOTHQ58A44 107 aa8.27□□□□□ -1.09
DNMT3A-202ENST00000321117 SPINK6Q6UWN8 80 aa8.27□□□□□ -1.09
DNMT3A-202ENST00000321117 PLA2G2DQ9UNK4 145 aa8.27□□□□□ -1.09
DNMT3A-202ENST00000321117 UBR5O95071 2799 aaPredicted RBP8.27□□□□□ -1.09
DNMT3A-202ENST00000321117 CELSR1Q9NYQ6 3014 aa8.27□□□□□ -1.09
DNMT3A-202ENST00000321117 EPM2AB3EWF7 344 aa8.26□□□□□ -1.09
DNMT3A-202ENST00000321117 A0A0G2JQZ4 141 aa8.26□□□□□ -1.09
DNMT3A-202ENST00000321117 A0A1W2PNN7 141 aa8.26□□□□□ -1.09
DNMT3A-202ENST00000321117 IGFL1Q6UW32 110 aa8.26□□□□□ -1.09
DNMT3A-202ENST00000321117 FP248Q71RG6 208 aaPredicted RBP8.25□□□□□ -1.09
DNMT3A-202ENST00000321117 KRTAP10-11P60412 298 aa8.23□□□□□ -1.09
DNMT3A-202ENST00000321117 C16orf90A8MZG2 172 aa8.23□□□□□ -1.09
DNMT3A-202ENST00000321117 H3BPC8 53 aa8.23□□□□□ -1.09
DNMT3A-202ENST00000321117 LIMD2Q9BT23 127 aa8.23□□□□□ -1.09
DNMT3A-202ENST00000321117 ZNF706Q9Y5V0 76 aaPredicted RBP8.23□□□□□ -1.09
DNMT3A-202ENST00000321117 IGHV6-1A0A0B4J1U7 121 aa8.22□□□□□ -1.09
DNMT3A-202ENST00000321117 CASC10Q5T4H9 136 aa8.22□□□□□ -1.09
DNMT3A-202ENST00000321117 PHF5AQ7RTV0 110 aaKnown RBP8.22□□□□□ -1.09
DNMT3A-202ENST00000321117 APCP25054 2843 aa8.2□□□□□ -1.1
DNMT3A-202ENST00000321117 DSCR10P59022 87 aa8.2□□□□□ -1.1
DNMT3A-202ENST00000321117 TRAV22A0A0B4J277 110 aa8.19□□□□□ -1.1
DNMT3A-202ENST00000321117 A8MUN3 132 aa8.19□□□□□ -1.1
DNMT3A-202ENST00000321117 TEP1Q99973 2627 aaKnown RBP8.19□□□□□ -1.1
DNMT3A-202ENST00000321117 IGLV5-37A0A075B6J1 123 aa8.19□□□□□ -1.1
DNMT3A-202ENST00000321117 CHTF8P0CG12 524 aa8.19□□□□□ -1.1
DNMT3A-202ENST00000321117 SPRR4Q96PI1 79 aa8.19□□□□□ -1.1
DNMT3A-202ENST00000321117 SVEP1Q4LDE5 3571 aa8.18□□□□□ -1.1
DNMT3A-202ENST00000321117 A8MWP4 228 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms