RNA–Protein interactions for RNA: ENST00000318066.6

UBE2N-201, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2N, Length 5,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-201ENST00000318066 H7BZZ5 65 aa12.61□□□□□ -0.39
UBE2N-201ENST00000318066 PCNTO95613 3336 aa12.6□□□□□ -0.39
UBE2N-201ENST00000318066 LINC00612Q8N6U2 182 aa12.6□□□□□ -0.39
UBE2N-201ENST00000318066 KRTAP24-1Q3LI83 254 aa12.6□□□□□ -0.39
UBE2N-201ENST00000318066 ANKRD17O75179 2603 aaKnown RBP12.59□□□□□ -0.39
UBE2N-201ENST00000318066 A0A1B0GVX0 72 aa12.58□□□□□ -0.4
UBE2N-201ENST00000318066 CHTF8P0CG12 524 aa12.58□□□□□ -0.4
UBE2N-201ENST00000318066 SPINT4Q6UDR6 99 aa12.56□□□□□ -0.4
UBE2N-201ENST00000318066 Q8N377 158 aa12.56□□□□□ -0.4
UBE2N-201ENST00000318066 SPANXA2-OT1Q8N9U9 137 aa12.55□□□□□ -0.4
UBE2N-201ENST00000318066 FAM168BA1KXE4 195 aa12.55□□□□□ -0.4
UBE2N-201ENST00000318066 EIF4EBP3O60516 100 aaPredicted RBP12.54□□□□□ -0.4
UBE2N-201ENST00000318066 KTN1-AS1Q86SY8 53 aa12.54□□□□□ -0.4
UBE2N-201ENST00000318066 MIR22HGQ0VDD5 57 aa12.53□□□□□ -0.4
UBE2N-201ENST00000318066 C15orf56Q8N910 161 aa12.53□□□□□ -0.4
UBE2N-201ENST00000318066 IGLV8-61A0A075B6I0 122 aa12.53□□□□□ -0.4
UBE2N-201ENST00000318066 ZNF861PO60384 105 aa12.52□□□□□ -0.41
UBE2N-201ENST00000318066 PLA2G1BP04054 148 aaKnown RBP12.51□□□□□ -0.41
UBE2N-201ENST00000318066 C19orf73Q9NVV2 129 aa12.48□□□□□ -0.41
UBE2N-201ENST00000318066 WWC2-AS2Q96NR7 200 aa12.48□□□□□ -0.41
UBE2N-201ENST00000318066 CRIPTQ9P021 101 aa12.47□□□□□ -0.41
UBE2N-201ENST00000318066 CHD7Q9P2D1 2997 aa12.47□□□□□ -0.41
UBE2N-201ENST00000318066 C9orf129Q5T035 196 aaKnown RBP12.47□□□□□ -0.41
UBE2N-201ENST00000318066 C9orf163Q8N9P6 203 aa12.46□□□□□ -0.42
UBE2N-201ENST00000318066 PCSK5Q92824 1860 aa12.46□□□□□ -0.42
UBE2N-201ENST00000318066 LCA10Q71F78 164 aa12.44□□□□□ -0.42
UBE2N-201ENST00000318066 GIG44P09565 113 aaPredicted RBP12.43□□□□□ -0.42
UBE2N-201ENST00000318066 OBSCN-AS1Q96MR7 158 aa12.41□□□□□ -0.42
UBE2N-201ENST00000318066 FLNBO75369 2602 aaKnown RBP12.4□□□□□ -0.42
UBE2N-201ENST00000318066 DSCR10P59022 87 aa12.4□□□□□ -0.42
UBE2N-201ENST00000318066 LINC00304Q8N9R0 145 aa12.4□□□□□ -0.42
UBE2N-201ENST00000318066 IGLV5-48A0A075B6I7 105 aa12.39□□□□□ -0.43
UBE2N-201ENST00000318066 C5orf42Q9H799 3197 aa12.38□□□□□ -0.43
UBE2N-201ENST00000318066 IGLV5-37A0A075B6J1 123 aa12.38□□□□□ -0.43
UBE2N-201ENST00000318066 CNBPP62633 177 aaKnown RBP12.37□□□□□ -0.43
UBE2N-201ENST00000318066 A0A1W2PNM2 257 aa12.36□□□□□ -0.43
UBE2N-201ENST00000318066 A0A096LNT2 108 aa12.36□□□□□ -0.43
UBE2N-201ENST00000318066 CDC42SE1Q9NRR8 79 aa12.33□□□□□ -0.44
UBE2N-201ENST00000318066 A0A087WTM6 91 aa12.32□□□□□ -0.44
UBE2N-201ENST00000318066 SPRR4Q96PI1 79 aa12.32□□□□□ -0.44
UBE2N-201ENST00000318066 RANBP2P49792 3224 aaKnown RBP12.31□□□□□ -0.44
UBE2N-201ENST00000318066 K7EIL1 84 aa12.29□□□□□ -0.44
UBE2N-201ENST00000318066 IGLV7-43P04211 117 aa12.29□□□□□ -0.44
UBE2N-201ENST00000318066 HTTP42858 3142 aa12.29□□□□□ -0.44
UBE2N-201ENST00000318066 Q5XG85 94 aa12.29□□□□□ -0.44
UBE2N-201ENST00000318066 FAM104AQ969W3 186 aa12.29□□□□□ -0.44
UBE2N-201ENST00000318066 HECTD1Q9ULT8 2610 aa12.27□□□□□ -0.44
UBE2N-201ENST00000318066 APLNQ9ULZ1 77 aa12.27□□□□□ -0.44
UBE2N-201ENST00000318066 Q1T7F1 81 aa12.26□□□□□ -0.45
UBE2N-201ENST00000318066 KRTAP10-11P60412 298 aa12.25□□□□□ -0.45
UBE2N-201ENST00000318066 OCR1Q9BZK8 76 aa12.25□□□□□ -0.45
UBE2N-201ENST00000318066 CHD9Q3L8U1 2897 aa12.24□□□□□ -0.45
UBE2N-201ENST00000318066 ZNF575Q86XF7 245 aa12.22□□□□□ -0.45
UBE2N-201ENST00000318066 A0A1W2PNN7 141 aa12.21□□□□□ -0.46
UBE2N-201ENST00000318066 PSORS1C2Q9UIG4 136 aa12.2□□□□□ -0.46
UBE2N-201ENST00000318066 RBM12B-AS1Q9P1G2 102 aa12.17□□□□□ -0.46
UBE2N-201ENST00000318066 COX6B2Q6YFQ2 88 aa12.17□□□□□ -0.46
UBE2N-201ENST00000318066 J3QL48 77 aa12.15□□□□□ -0.46
UBE2N-201ENST00000318066 A0A0G2JQZ4 141 aa12.14□□□□□ -0.47
UBE2N-201ENST00000318066 IGLV7-46A0A075B6I9 117 aa12.13□□□□□ -0.47
UBE2N-201ENST00000318066 USP24Q9UPU5 2620 aa12.12□□□□□ -0.47
UBE2N-201ENST00000318066 KRTAP10-3P60369 221 aa12.11□□□□□ -0.47
UBE2N-201ENST00000318066 MKI67P46013 3256 aaKnown RBP12.1□□□□□ -0.47
UBE2N-201ENST00000318066 LAMA3Q16787 3333 aa12.09□□□□□ -0.47
UBE2N-201ENST00000318066 C9orf92A6NGG3 77 aa12.09□□□□□ -0.47
UBE2N-201ENST00000318066 FP248Q71RG6 208 aaPredicted RBP12.08□□□□□ -0.48
UBE2N-201ENST00000318066 Q75L30 129 aa12.06□□□□□ -0.48
UBE2N-201ENST00000318066 MGAM2Q2M2H8 2515 aa12.05□□□□□ -0.48
UBE2N-201ENST00000318066 CYSTM1Q9H1C7 97 aa12.05□□□□□ -0.48
UBE2N-201ENST00000318066 ANAPC11Q9NYG5 84 aa12.04□□□□□ -0.48
UBE2N-201ENST00000318066 CASC10Q5T4H9 136 aa12.03□□□□□ -0.48
UBE2N-201ENST00000318066 BPTFQ12830 3046 aa12.03□□□□□ -0.48
UBE2N-201ENST00000318066 CENPEQ02224 2701 aa12.02□□□□□ -0.49
UBE2N-201ENST00000318066 PRR26Q8N8Z3 221 aa12□□□□□ -0.49
UBE2N-201ENST00000318066 Q8N1X5 172 aa11.99□□□□□ -0.49
UBE2N-201ENST00000318066 BRCA2P51587 3418 aa11.99□□□□□ -0.49
UBE2N-201ENST00000318066 LINC01558Q9Y6Z2 57 aa11.98□□□□□ -0.49
UBE2N-201ENST00000318066 H3BS24 57 aa11.98□□□□□ -0.49
UBE2N-201ENST00000318066 FAM229BQ4G0N7 80 aa11.98□□□□□ -0.49
UBE2N-201ENST00000318066 LUZP6Q538Z0 58 aa11.98□□□□□ -0.49
UBE2N-201ENST00000318066 TRANK1O15050 2925 aa11.97□□□□□ -0.49
UBE2N-201ENST00000318066 FLNAP21333 2647 aaKnown RBP11.96□□□□□ -0.5
UBE2N-201ENST00000318066 A0A1B0GU33 70 aa11.93□□□□□ -0.5
UBE2N-201ENST00000318066 KRTAP1-3Q8IUG1 177 aa11.93□□□□□ -0.5
UBE2N-201ENST00000318066 LINC01554Q52M75 96 aa11.92□□□□□ -0.5
UBE2N-201ENST00000318066 OXTP01178 125 aa11.92□□□□□ -0.5
UBE2N-201ENST00000318066 SPRR1AP35321 89 aa11.92□□□□□ -0.5
UBE2N-201ENST00000318066 HRES1P13985 223 aa11.91□□□□□ -0.5
UBE2N-201ENST00000318066 ITPR3Q14573 2671 aa11.91□□□□□ -0.5
UBE2N-201ENST00000318066 A0A0D9SG42 100 aa11.9□□□□□ -0.5
UBE2N-201ENST00000318066 Q8N9P0 234 aaPredicted RBP11.9□□□□□ -0.51
UBE2N-201ENST00000318066 HELZ2Q9BYK8 2649 aaKnown RBP11.89□□□□□ -0.51
UBE2N-201ENST00000318066 KRTAP1-1Q07627 177 aa11.89□□□□□ -0.51
UBE2N-201ENST00000318066 CR1P17927 2039 aa11.89□□□□□ -0.51
UBE2N-201ENST00000318066 MMP24-AS1A0A0U1RRL7 71 aa11.88□□□□□ -0.51
UBE2N-201ENST00000318066 SPRR1BP22528 89 aa11.88□□□□□ -0.51
UBE2N-201ENST00000318066 SMR3BP02814 79 aaPredicted RBP11.87□□□□□ -0.51
UBE2N-201ENST00000318066 LAMA2P24043 3122 aaKnown RBP11.87□□□□□ -0.51
UBE2N-201ENST00000318066 CFAP54Q96N23 3096 aa11.86□□□□□ -0.51
UBE2N-201ENST00000318066 CFAP46Q8IYW2 2715 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms