RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 UPK3BQ9BT76 320 aa13.39□□□□□ -0.27
TTC39C-202ENST00000317571 COL7A1Q02388 2944 aa13.39□□□□□ -0.27
TTC39C-202ENST00000317571 DNAH10Q8IVF4 4471 aa13.38□□□□□ -0.27
TTC39C-202ENST00000317571 C7orf33Q8WU49 177 aa13.38□□□□□ -0.27
TTC39C-202ENST00000317571 DNAH9Q9NYC9 4486 aa13.37□□□□□ -0.27
TTC39C-202ENST00000317571 FAM168BA1KXE4 195 aa13.37□□□□□ -0.27
TTC39C-202ENST00000317571 TLX1NBP0CAT3 122 aa13.37□□□□□ -0.27
TTC39C-202ENST00000317571 KRTAP7-1Q8IUC3 87 aa13.36□□□□□ -0.27
TTC39C-202ENST00000317571 DSCR8Q96T75 97 aa13.35□□□□□ -0.27
TTC39C-202ENST00000317571 KCNQ1DNQ9H478 68 aa13.34□□□□□ -0.27
TTC39C-202ENST00000317571 GHRHP01286 108 aa13.33□□□□□ -0.27
TTC39C-202ENST00000317571 STAB2Q8WWQ8 2551 aa13.33□□□□□ -0.28
TTC39C-202ENST00000317571 TRBV7-4A0A0J9YYF1 115 aa13.32□□□□□ -0.28
TTC39C-202ENST00000317571 NKAPP1Q8N9T2 125 aa13.32□□□□□ -0.28
TTC39C-202ENST00000317571 KRTAP1-5Q9BYS1 174 aa13.32□□□□□ -0.28
TTC39C-202ENST00000317571 Q6ZVQ6 151 aa13.31□□□□□ -0.28
TTC39C-202ENST00000317571 LOC107984640A0A0U1RRK4 108 aa13.3□□□□□ -0.28
TTC39C-202ENST00000317571 H3BQ85 93 aa13.3□□□□□ -0.28
TTC39C-202ENST00000317571 LINC01547P58512 204 aaPredicted RBP13.3□□□□□ -0.28
TTC39C-202ENST00000317571 PLA2G2DQ9UNK4 145 aa13.29□□□□□ -0.28
TTC39C-202ENST00000317571 RPL37AP8A6NKH3 93 aa13.29□□□□□ -0.28
TTC39C-202ENST00000317571 C5orf47Q569G3 176 aa13.29□□□□□ -0.28
TTC39C-202ENST00000317571 HAMPP81172 84 aa13.28□□□□□ -0.28
TTC39C-202ENST00000317571 PDE6GP18545 87 aa13.28□□□□□ -0.28
TTC39C-202ENST00000317571 KRTAP4-16G5E9R7 235 aaPredicted RBP13.26□□□□□ -0.29
TTC39C-202ENST00000317571 IGLV5-37A0A075B6J1 123 aa13.25□□□□□ -0.29
TTC39C-202ENST00000317571 RMI2Q96E14 147 aa13.25□□□□□ -0.29
TTC39C-202ENST00000317571 IGLV1-50A0A075B6I6 118 aa13.24□□□□□ -0.29
TTC39C-202ENST00000317571 TMEM258P61165 79 aa13.24□□□□□ -0.29
TTC39C-202ENST00000317571 DYNC2H1Q8NCM8 4307 aaKnown RBP13.23□□□□□ -0.29
TTC39C-202ENST00000317571 J3KT08 172 aa13.23□□□□□ -0.29
TTC39C-202ENST00000317571 Q9BRP9 147 aa13.23□□□□□ -0.29
TTC39C-202ENST00000317571 FAM19A5Q7Z5A7 132 aaPredicted RBP13.21□□□□□ -0.29
TTC39C-202ENST00000317571 CSMD3Q7Z407 3707 aa13.21□□□□□ -0.29
TTC39C-202ENST00000317571 SPRR1AP35321 89 aa13.21□□□□□ -0.3
TTC39C-202ENST00000317571 Q8N377 158 aa13.21□□□□□ -0.3
TTC39C-202ENST00000317571 MDFIQ99750 246 aa13.21□□□□□ -0.3
TTC39C-202ENST00000317571 DNAH7Q8WXX0 4024 aa13.2□□□□□ -0.3
TTC39C-202ENST00000317571 Q6ZRX8 168 aa13.2□□□□□ -0.3
TTC39C-202ENST00000317571 CXCL6P80162 114 aa13.19□□□□□ -0.3
TTC39C-202ENST00000317571 DEFB105AQ8NG35 78 aa13.19□□□□□ -0.3
TTC39C-202ENST00000317571 DPH3Q96FX2 82 aa13.18□□□□□ -0.3
TTC39C-202ENST00000317571 PRYO14603 147 aa13.18□□□□□ -0.3
TTC39C-202ENST00000317571 RPS28P62857 69 aaKnown RBP13.17□□□□□ -0.3
TTC39C-202ENST00000317571 SCXQ7RTU7 201 aa13.17□□□□□ -0.3
TTC39C-202ENST00000317571 C20orf197Q8N268 126 aa13.17□□□□□ -0.3
TTC39C-202ENST00000317571 APLNQ9ULZ1 77 aa13.17□□□□□ -0.3
TTC39C-202ENST00000317571 PLECQ15149 4684 aaKnown RBP13.16□□□□□ -0.3
TTC39C-202ENST00000317571 MRPL55Q7Z7F7 128 aaKnown RBP13.16□□□□□ -0.3
TTC39C-202ENST00000317571 ST20-AS1Q8NBB2 130 aa13.14□□□□□ -0.31
TTC39C-202ENST00000317571 ERC2-IT1O76042 136 aa13.13□□□□□ -0.31
TTC39C-202ENST00000317571 TRAV7A0A075B6U4 112 aa13.13□□□□□ -0.31
TTC39C-202ENST00000317571 BCE1O60756 84 aa13.13□□□□□ -0.31
TTC39C-202ENST00000317571 A0A096LNI7 61 aa13.12□□□□□ -0.31
TTC39C-202ENST00000317571 TENM2Q9NT68 2774 aa13.12□□□□□ -0.31
TTC39C-202ENST00000317571 ETDCA0A1B0GVM5 59 aa13.12□□□□□ -0.31
TTC39C-202ENST00000317571 DHRS4-AS1Q9P1J3 65 aa13.12□□□□□ -0.31
TTC39C-202ENST00000317571 OXTP01178 125 aa13.1□□□□□ -0.31
TTC39C-202ENST00000317571 IGLV5-48A0A075B6I7 105 aa13.09□□□□□ -0.31
TTC39C-202ENST00000317571 UBE2DNLQ8IWF7 75 aa13.08□□□□□ -0.32
TTC39C-202ENST00000317571 IGKV2-24A0A0C4DH68 120 aa13.08□□□□□ -0.32
TTC39C-202ENST00000317571 A0A1W2PNN7 141 aa13.08□□□□□ -0.32
TTC39C-202ENST00000317571 CNBPP62633 177 aaKnown RBP13.08□□□□□ -0.32
TTC39C-202ENST00000317571 TNP2Q05952 138 aa13.07□□□□□ -0.32
TTC39C-202ENST00000317571 B9D2Q9BPU9 175 aa13.07□□□□□ -0.32
TTC39C-202ENST00000317571 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.05□□□□□ -0.32
TTC39C-202ENST00000317571 C3orf84H3BNL1 204 aa13.05□□□□□ -0.32
TTC39C-202ENST00000317571 PSCAO43653 123 aa13.05□□□□□ -0.32
TTC39C-202ENST00000317571 C16orf90A8MZG2 172 aa13.04□□□□□ -0.32
TTC39C-202ENST00000317571 REG3GQ6UW15 175 aa13.04□□□□□ -0.32
TTC39C-202ENST00000317571 H7BZZ5 65 aa13.02□□□□□ -0.32
TTC39C-202ENST00000317571 UBE2BP63146 152 aa13.02□□□□□ -0.32
TTC39C-202ENST00000317571 Q8N9L7 120 aa13.02□□□□□ -0.32
TTC39C-202ENST00000317571 A0A1W2PNM2 257 aa13.02□□□□□ -0.33
TTC39C-202ENST00000317571 SNURFQ9Y675 71 aa13.01□□□□□ -0.33
TTC39C-202ENST00000317571 CHTF8P0CG12 524 aa13.01□□□□□ -0.33
TTC39C-202ENST00000317571 STARD9Q9P2P6 4700 aa13.01□□□□□ -0.33
TTC39C-202ENST00000317571 KLKP1Q107X0 134 aa13□□□□□ -0.33
TTC39C-202ENST00000317571 NREPQ16612 68 aa13□□□□□ -0.33
TTC39C-202ENST00000317571 KRTAP11-1Q8IUC1 163 aa13□□□□□ -0.33
TTC39C-202ENST00000317571 SMIM29Q86T20 159 aa12.98□□□□□ -0.33
TTC39C-202ENST00000317571 FAM236DA0A1B0GTK5 79 aa12.98□□□□□ -0.33
TTC39C-202ENST00000317571 FAM236CP0DP71 79 aa12.98□□□□□ -0.33
TTC39C-202ENST00000317571 PRLHP81277 87 aa12.98□□□□□ -0.33
TTC39C-202ENST00000317571 PRKDCP78527 4128 aaKnown RBP12.97□□□□□ -0.33
TTC39C-202ENST00000317571 IGKV4-1P06312 121 aa12.97□□□□□ -0.33
TTC39C-202ENST00000317571 C1orf137Q5JT78 98 aa12.97□□□□□ -0.33
TTC39C-202ENST00000317571 LRCOL1A6NCL2 159 aa12.97□□□□□ -0.33
TTC39C-202ENST00000317571 BPY2O14599 106 aa12.95□□□□□ -0.34
TTC39C-202ENST00000317571 VPS13DQ5THJ4 4388 aa12.94□□□□□ -0.34
TTC39C-202ENST00000317571 A0A0G2JQZ4 141 aa12.93□□□□□ -0.34
TTC39C-202ENST00000317571 NBDYA0A0U1RRE5 68 aa12.93□□□□□ -0.34
TTC39C-202ENST00000317571 Q6ZRN7 208 aaPredicted RBP12.93□□□□□ -0.34
TTC39C-202ENST00000317571 PHF5AQ7RTV0 110 aaKnown RBP12.93□□□□□ -0.34
TTC39C-202ENST00000317571 C4orf26Q17RF5 130 aa12.92□□□□□ -0.34
TTC39C-202ENST00000317571 Q8NBF4 154 aa12.92□□□□□ -0.34
TTC39C-202ENST00000317571 F8WEM9 126 aa12.91□□□□□ -0.34
TTC39C-202ENST00000317571 FUSP35637 526 aaKnown RBP eCLIP12.9□□□□□ -0.34
TTC39C-202ENST00000317571 C14orf177Q52M58 125 aa12.9□□□□□ -0.34
TTC39C-202ENST00000317571 PANO1I0J062 215 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms