RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 UBE2DNLQ8IWF7 75 aa7.51□□□□□ -1.21
PTPN2-201ENST00000309660 GHRHP01286 108 aa7.51□□□□□ -1.21
PTPN2-201ENST00000309660 COX7CP15954 63 aa7.51□□□□□ -1.21
PTPN2-201ENST00000309660 LOC110117498A0A087WWA1 95 aa7.5□□□□□ -1.21
PTPN2-201ENST00000309660 RMI2Q96E14 147 aa7.5□□□□□ -1.21
PTPN2-201ENST00000309660 CMYA5Q8N3K9 4069 aa7.49□□□□□ -1.21
PTPN2-201ENST00000309660 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.49□□□□□ -1.21
PTPN2-201ENST00000309660 ETDCA0A1B0GVM5 59 aa7.49□□□□□ -1.21
PTPN2-201ENST00000309660 LINC01547P58512 204 aaPredicted RBP7.48□□□□□ -1.21
PTPN2-201ENST00000309660 SMIM20Q8N5G0 67 aa7.48□□□□□ -1.21
PTPN2-201ENST00000309660 C3orf84H3BNL1 204 aa7.48□□□□□ -1.21
PTPN2-201ENST00000309660 TRBV7-6A0A0J9YX20 115 aa7.48□□□□□ -1.21
PTPN2-201ENST00000309660 ATP5EP2Q5VTU8 51 aa7.48□□□□□ -1.21
PTPN2-201ENST00000309660 PDE6GP18545 87 aa7.47□□□□□ -1.21
PTPN2-201ENST00000309660 UBE2BP63146 152 aa7.47□□□□□ -1.21
PTPN2-201ENST00000309660 H3BQ85 93 aa7.47□□□□□ -1.21
PTPN2-201ENST00000309660 KCNQ1DNQ9H478 68 aa7.47□□□□□ -1.21
PTPN2-201ENST00000309660 COL7A1Q02388 2944 aa7.46□□□□□ -1.21
PTPN2-201ENST00000309660 TRBV7-4A0A0J9YYF1 115 aa7.46□□□□□ -1.22
PTPN2-201ENST00000309660 F8WDY8 70 aa7.46□□□□□ -1.22
PTPN2-201ENST00000309660 SERP2Q8N6R1 65 aa7.46□□□□□ -1.22
PTPN2-201ENST00000309660 ST20-AS1Q8NBB2 130 aa7.46□□□□□ -1.22
PTPN2-201ENST00000309660 KRTAP1-5Q9BYS1 174 aa7.46□□□□□ -1.22
PTPN2-201ENST00000309660 CYSTM1Q9H1C7 97 aa7.45□□□□□ -1.22
PTPN2-201ENST00000309660 MRPL55Q7Z7F7 128 aaKnown RBP7.44□□□□□ -1.22
PTPN2-201ENST00000309660 Q8N9L7 120 aa7.44□□□□□ -1.22
PTPN2-201ENST00000309660 Q8N377 158 aa7.44□□□□□ -1.22
PTPN2-201ENST00000309660 HUWE1Q7Z6Z7 4374 aaKnown RBP7.44□□□□□ -1.22
PTPN2-201ENST00000309660 IGLV1-50A0A075B6I6 118 aa7.43□□□□□ -1.22
PTPN2-201ENST00000309660 LOC107984640A0A0U1RRK4 108 aa7.43□□□□□ -1.22
PTPN2-201ENST00000309660 Q6ZRX8 168 aa7.43□□□□□ -1.22
PTPN2-201ENST00000309660 TLX1NBP0CAT3 122 aa7.43□□□□□ -1.22
PTPN2-201ENST00000309660 KRTAP7-1Q8IUC3 87 aa7.43□□□□□ -1.22
PTPN2-201ENST00000309660 MDFIQ99750 246 aa7.43□□□□□ -1.22
PTPN2-201ENST00000309660 Q9BRP9 147 aa7.43□□□□□ -1.22
PTPN2-201ENST00000309660 CSMD3Q7Z407 3707 aa7.43□□□□□ -1.22
PTPN2-201ENST00000309660 ERC2-IT1O76042 136 aa7.42□□□□□ -1.22
PTPN2-201ENST00000309660 NREPQ16612 68 aa7.42□□□□□ -1.22
PTPN2-201ENST00000309660 A0A096LNI7 61 aa7.41□□□□□ -1.22
PTPN2-201ENST00000309660 C20orf197Q8N268 126 aa7.41□□□□□ -1.22
PTPN2-201ENST00000309660 DHRS4-AS1Q9P1J3 65 aa7.41□□□□□ -1.22
PTPN2-201ENST00000309660 LYSTQ99698 3801 aa7.41□□□□□ -1.22
PTPN2-201ENST00000309660 PRYO14603 147 aa7.4□□□□□ -1.22
PTPN2-201ENST00000309660 PRLHP81277 87 aa7.4□□□□□ -1.22
PTPN2-201ENST00000309660 CHTF8P0CG12 524 aa7.4□□□□□ -1.23
PTPN2-201ENST00000309660 CRYGAP11844 174 aa7.39□□□□□ -1.23
PTPN2-201ENST00000309660 HIGD2AQ9BW72 106 aa7.39□□□□□ -1.23
PTPN2-201ENST00000309660 DPH3Q96FX2 82 aa7.39□□□□□ -1.23
PTPN2-201ENST00000309660 A0A0G2JQZ4 141 aa7.38□□□□□ -1.23
PTPN2-201ENST00000309660 A0A1W2PNN7 141 aa7.38□□□□□ -1.23
PTPN2-201ENST00000309660 REG3GQ6UW15 175 aa7.38□□□□□ -1.23
PTPN2-201ENST00000309660 DNAH3Q8TD57 4116 aa7.38□□□□□ -1.23
PTPN2-201ENST00000309660 PLA2G2DQ9UNK4 145 aa7.37□□□□□ -1.23
PTPN2-201ENST00000309660 FUSP35637 526 aaKnown RBP eCLIP7.37□□□□□ -1.23
PTPN2-201ENST00000309660 C1orf137Q5JT78 98 aa7.37□□□□□ -1.23
PTPN2-201ENST00000309660 CXCL6P80162 114 aa7.37□□□□□ -1.23
PTPN2-201ENST00000309660 BPY2O14599 106 aa7.36□□□□□ -1.23
PTPN2-201ENST00000309660 DNAH10Q8IVF4 4471 aa7.36□□□□□ -1.23
PTPN2-201ENST00000309660 KRTAP4-16G5E9R7 235 aaPredicted RBP7.36□□□□□ -1.23
PTPN2-201ENST00000309660 APLNQ9ULZ1 77 aa7.35□□□□□ -1.23
PTPN2-201ENST00000309660 IGLV5-37A0A075B6J1 123 aa7.35□□□□□ -1.23
PTPN2-201ENST00000309660 SPRR1AP35321 89 aa7.35□□□□□ -1.23
PTPN2-201ENST00000309660 SNURFQ9Y675 71 aa7.35□□□□□ -1.23
PTPN2-201ENST00000309660 SRRM2Q9UQ35 2752 aaKnown RBP7.34□□□□□ -1.23
PTPN2-201ENST00000309660 PHF5AQ7RTV0 110 aaKnown RBP7.33□□□□□ -1.24
PTPN2-201ENST00000309660 C16orf90A8MZG2 172 aa7.33□□□□□ -1.24
PTPN2-201ENST00000309660 F8WEM9 126 aa7.33□□□□□ -1.24
PTPN2-201ENST00000309660 A0A1W2PNM2 257 aa7.33□□□□□ -1.24
PTPN2-201ENST00000309660 IGLV5-48A0A075B6I7 105 aa7.32□□□□□ -1.24
PTPN2-201ENST00000309660 B9D2Q9BPU9 175 aa7.31□□□□□ -1.24
PTPN2-201ENST00000309660 TRAV7A0A075B6U4 112 aa7.31□□□□□ -1.24
PTPN2-201ENST00000309660 DEFB116Q30KQ4 102 aa7.29□□□□□ -1.24
PTPN2-201ENST00000309660 CNBPP62633 177 aaKnown RBP7.29□□□□□ -1.24
PTPN2-201ENST00000309660 LINC00476Q8WZB0 136 aa7.29□□□□□ -1.24
PTPN2-201ENST00000309660 TMEM258P61165 79 aa7.28□□□□□ -1.24
PTPN2-201ENST00000309660 Q8NBF4 154 aa7.28□□□□□ -1.24
PTPN2-201ENST00000309660 NBDYA0A0U1RRE5 68 aa7.28□□□□□ -1.24
PTPN2-201ENST00000309660 IGKV4-1P06312 121 aa7.28□□□□□ -1.24
PTPN2-201ENST00000309660 C14orf177Q52M58 125 aa7.28□□□□□ -1.24
PTPN2-201ENST00000309660 KRTAP11-1Q8IUC1 163 aa7.28□□□□□ -1.24
PTPN2-201ENST00000309660 DNAH9Q9NYC9 4486 aa7.28□□□□□ -1.24
PTPN2-201ENST00000309660 UBE2AP49459 152 aa7.26□□□□□ -1.25
PTPN2-201ENST00000309660 TNP2Q05952 138 aa7.26□□□□□ -1.25
PTPN2-201ENST00000309660 J3KT08 172 aa7.26□□□□□ -1.25
PTPN2-201ENST00000309660 SMIM29Q86T20 159 aa7.25□□□□□ -1.25
PTPN2-201ENST00000309660 DNAH1Q9P2D7 4330 aa7.25□□□□□ -1.25
PTPN2-201ENST00000309660 NUPR2A6NF83 97 aa7.25□□□□□ -1.25
PTPN2-201ENST00000309660 EPM2AB3EWF7 344 aa7.25□□□□□ -1.25
PTPN2-201ENST00000309660 PANO1I0J062 215 aa7.25□□□□□ -1.25
PTPN2-201ENST00000309660 A0A087WSZ3 146 aa7.24□□□□□ -1.25
PTPN2-201ENST00000309660 IGFL1Q6UW32 110 aa7.24□□□□□ -1.25
PTPN2-201ENST00000309660 C9orf163Q8N9P6 203 aa7.24□□□□□ -1.25
PTPN2-201ENST00000309660 FAM30AQ9NZY2 134 aa7.23□□□□□ -1.25
PTPN2-201ENST00000309660 LRCOL1A6NCL2 159 aa7.22□□□□□ -1.25
PTPN2-201ENST00000309660 DNAH7Q8WXX0 4024 aa7.22□□□□□ -1.25
PTPN2-201ENST00000309660 K7EQZ3 153 aa7.22□□□□□ -1.25
PTPN2-201ENST00000309660 FAM236DA0A1B0GTK5 79 aa7.21□□□□□ -1.26
PTPN2-201ENST00000309660 FAM236CP0DP71 79 aa7.21□□□□□ -1.26
PTPN2-201ENST00000309660 H7BZZ5 65 aa7.21□□□□□ -1.26
PTPN2-201ENST00000309660 PLECQ15149 4684 aaKnown RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms