RNA–Protein interactions for RNA: ENST00000309033.4

UBXN2A-201, Transcript of UBX domain protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN2A, Length 6,066 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2A-201ENST00000309033 LOC101927531A0A1B0GV80 90 aa12.18□□□□□ -0.46
UBXN2A-201ENST00000309033 LINC00612Q8N6U2 182 aa12.16□□□□□ -0.46
UBXN2A-201ENST00000309033 ANAPC11Q9NYG5 84 aa12.16□□□□□ -0.46
UBXN2A-201ENST00000309033 C8orf87E5RJ46 101 aa12.15□□□□□ -0.46
UBXN2A-201ENST00000309033 CASC10Q5T4H9 136 aa12.15□□□□□ -0.46
UBXN2A-201ENST00000309033 CEP350Q5VT06 3117 aa12.14□□□□□ -0.47
UBXN2A-201ENST00000309033 COA5Q86WW8 74 aa12.14□□□□□ -0.47
UBXN2A-201ENST00000309033 PRRC2CQ9Y520 2896 aaKnown RBP12.12□□□□□ -0.47
UBXN2A-201ENST00000309033 C8orf17Q9NRJ1 99 aa12.11□□□□□ -0.47
UBXN2A-201ENST00000309033 A0A087WTM6 91 aa12.1□□□□□ -0.47
UBXN2A-201ENST00000309033 KRTAP1-3Q8IUG1 177 aa12.1□□□□□ -0.47
UBXN2A-201ENST00000309033 PRR15Q8IV56 129 aa12.1□□□□□ -0.47
UBXN2A-201ENST00000309033 A8MUN3 132 aa12.1□□□□□ -0.47
UBXN2A-201ENST00000309033 C9orf92A6NGG3 77 aa12.09□□□□□ -0.47
UBXN2A-201ENST00000309033 ZNF861PO60384 105 aa12.09□□□□□ -0.47
UBXN2A-201ENST00000309033 OBSCN-AS1Q96MR7 158 aa12.08□□□□□ -0.47
UBXN2A-201ENST00000309033 ERC2-IT1O76042 136 aa12.08□□□□□ -0.48
UBXN2A-201ENST00000309033 SMR3BP02814 79 aaPredicted RBP12.08□□□□□ -0.48
UBXN2A-201ENST00000309033 TLX1NBP0CAT3 122 aa12.05□□□□□ -0.48
UBXN2A-201ENST00000309033 A0A1B0GVX0 72 aa12.05□□□□□ -0.48
UBXN2A-201ENST00000309033 F8P00451 2351 aa12.04□□□□□ -0.48
UBXN2A-201ENST00000309033 LINC01600Q96MT4 127 aa12.04□□□□□ -0.48
UBXN2A-201ENST00000309033 LINC00304Q8N9R0 145 aa12.04□□□□□ -0.48
UBXN2A-201ENST00000309033 C9orf163Q8N9P6 203 aa12.04□□□□□ -0.48
UBXN2A-201ENST00000309033 C5orf42Q9H799 3197 aa12.03□□□□□ -0.48
UBXN2A-201ENST00000309033 PLA2G2DQ9UNK4 145 aa12.03□□□□□ -0.48
UBXN2A-201ENST00000309033 J3QL48 77 aa12.02□□□□□ -0.48
UBXN2A-201ENST00000309033 KRTAP1-1Q07627 177 aa12.01□□□□□ -0.49
UBXN2A-201ENST00000309033 EPG5Q9HCE0 2579 aa11.99□□□□□ -0.49
UBXN2A-201ENST00000309033 PSORS1C2Q9UIG4 136 aa11.99□□□□□ -0.49
UBXN2A-201ENST00000309033 APLNQ9ULZ1 77 aa11.98□□□□□ -0.49
UBXN2A-201ENST00000309033 SSBP3-AS1Q7Z2R9 100 aa11.98□□□□□ -0.49
UBXN2A-201ENST00000309033 KLKP1Q107X0 134 aa11.97□□□□□ -0.49
UBXN2A-201ENST00000309033 IGLV7-43P04211 117 aa11.96□□□□□ -0.49
UBXN2A-201ENST00000309033 ZNF575Q86XF7 245 aa11.96□□□□□ -0.5
UBXN2A-201ENST00000309033 A0A1W2PNM2 257 aa11.95□□□□□ -0.5
UBXN2A-201ENST00000309033 PCNTO95613 3336 aa11.94□□□□□ -0.5
UBXN2A-201ENST00000309033 SPRR4Q96PI1 79 aa11.92□□□□□ -0.5
UBXN2A-201ENST00000309033 H7BZZ5 65 aa11.91□□□□□ -0.5
UBXN2A-201ENST00000309033 CNBPP62633 177 aaKnown RBP11.9□□□□□ -0.5
UBXN2A-201ENST00000309033 UQCR11O14957 56 aa11.9□□□□□ -0.5
UBXN2A-201ENST00000309033 SPINT4Q6UDR6 99 aa11.9□□□□□ -0.51
UBXN2A-201ENST00000309033 HECTD1Q9ULT8 2610 aa11.89□□□□□ -0.51
UBXN2A-201ENST00000309033 COX6B2Q6YFQ2 88 aa11.89□□□□□ -0.51
UBXN2A-201ENST00000309033 CYP4F30PQ9H0H9 118 aa11.88□□□□□ -0.51
UBXN2A-201ENST00000309033 CHD7Q9P2D1 2997 aa11.85□□□□□ -0.51
UBXN2A-201ENST00000309033 MIR22HGQ0VDD5 57 aa11.84□□□□□ -0.51
UBXN2A-201ENST00000309033 FAM104AQ969W3 186 aa11.81□□□□□ -0.52
UBXN2A-201ENST00000309033 BPTFQ12830 3046 aa11.8□□□□□ -0.52
UBXN2A-201ENST00000309033 Q8N1X5 172 aa11.79□□□□□ -0.52
UBXN2A-201ENST00000309033 IGLV5-37A0A075B6J1 123 aa11.78□□□□□ -0.52
UBXN2A-201ENST00000309033 LINC00336Q6ZUF6 198 aa11.78□□□□□ -0.52
UBXN2A-201ENST00000309033 IGLV5-48A0A075B6I7 105 aa11.77□□□□□ -0.52
UBXN2A-201ENST00000309033 USP24Q9UPU5 2620 aa11.77□□□□□ -0.53
UBXN2A-201ENST00000309033 TNP2Q05952 138 aa11.74□□□□□ -0.53
UBXN2A-201ENST00000309033 FLNBO75369 2602 aaKnown RBP11.73□□□□□ -0.53
UBXN2A-201ENST00000309033 MGAM2Q2M2H8 2515 aa11.72□□□□□ -0.53
UBXN2A-201ENST00000309033 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.71□□□□□ -0.54
UBXN2A-201ENST00000309033 A0A0D9SG42 100 aa11.68□□□□□ -0.54
UBXN2A-201ENST00000309033 CRIPTQ9P021 101 aa11.67□□□□□ -0.54
UBXN2A-201ENST00000309033 LINC01554Q52M75 96 aa11.66□□□□□ -0.54
UBXN2A-201ENST00000309033 FLNAP21333 2647 aaKnown RBP11.66□□□□□ -0.54
UBXN2A-201ENST00000309033 SPANXA2-OT1Q8N9U9 137 aa11.65□□□□□ -0.54
UBXN2A-201ENST00000309033 OCR1Q9BZK8 76 aa11.64□□□□□ -0.55
UBXN2A-201ENST00000309033 RBM12B-AS1Q9P1G2 102 aa11.63□□□□□ -0.55
UBXN2A-201ENST00000309033 Q8NDZ9 215 aa11.62□□□□□ -0.55
UBXN2A-201ENST00000309033 CR1P17927 2039 aa11.61□□□□□ -0.55
UBXN2A-201ENST00000309033 PRR26Q8N8Z3 221 aa11.59□□□□□ -0.55
UBXN2A-201ENST00000309033 ITPR3Q14573 2671 aa11.59□□□□□ -0.55
UBXN2A-201ENST00000309033 HTTP42858 3142 aa11.58□□□□□ -0.56
UBXN2A-201ENST00000309033 CHD9Q3L8U1 2897 aa11.58□□□□□ -0.56
UBXN2A-201ENST00000309033 MKI67P46013 3256 aaKnown RBP11.53□□□□□ -0.56
UBXN2A-201ENST00000309033 CD164Q04900 197 aa11.52□□□□□ -0.57
UBXN2A-201ENST00000309033 KTN1-AS1Q86SY8 53 aa11.52□□□□□ -0.57
UBXN2A-201ENST00000309033 RANBP2P49792 3224 aaKnown RBP11.51□□□□□ -0.57
UBXN2A-201ENST00000309033 CDC42SE1Q9NRR8 79 aa11.49□□□□□ -0.57
UBXN2A-201ENST00000309033 ATRQ13535 2644 aa11.48□□□□□ -0.57
UBXN2A-201ENST00000309033 WIPF1O43516 503 aa11.48□□□□□ -0.57
UBXN2A-201ENST00000309033 CFAP54Q96N23 3096 aa11.47□□□□□ -0.57
UBXN2A-201ENST00000309033 HRES1P13985 223 aa11.47□□□□□ -0.57
UBXN2A-201ENST00000309033 LAMA3Q16787 3333 aa11.46□□□□□ -0.57
UBXN2A-201ENST00000309033 IGLV7-46A0A075B6I9 117 aa11.44□□□□□ -0.58
UBXN2A-201ENST00000309033 Q6ZSA8 131 aa11.44□□□□□ -0.58
UBXN2A-201ENST00000309033 MMP24-AS1A0A0U1RRL7 71 aa11.43□□□□□ -0.58
UBXN2A-201ENST00000309033 Q1T7F1 81 aa11.43□□□□□ -0.58
UBXN2A-201ENST00000309033 PLAC8Q9NZF1 115 aa11.42□□□□□ -0.58
UBXN2A-201ENST00000309033 LCA10Q71F78 164 aa11.41□□□□□ -0.58
UBXN2A-201ENST00000309033 BRCA2P51587 3418 aa11.41□□□□□ -0.58
UBXN2A-201ENST00000309033 SPRR1AP35321 89 aa11.4□□□□□ -0.58
UBXN2A-201ENST00000309033 HELZ2Q9BYK8 2649 aaKnown RBP11.4□□□□□ -0.59
UBXN2A-201ENST00000309033 FAM229BQ4G0N7 80 aa11.39□□□□□ -0.59
UBXN2A-201ENST00000309033 Q8N9P0 234 aaPredicted RBP11.39□□□□□ -0.59
UBXN2A-201ENST00000309033 KRTAP1-5Q9BYS1 174 aa11.38□□□□□ -0.59
UBXN2A-201ENST00000309033 CYSTM1Q9H1C7 97 aa11.38□□□□□ -0.59
UBXN2A-201ENST00000309033 MAST4O15021 2626 aa11.37□□□□□ -0.59
UBXN2A-201ENST00000309033 CFAP46Q8IYW2 2715 aa11.37□□□□□ -0.59
UBXN2A-201ENST00000309033 A0A0C4DFX4 3053 aa11.36□□□□□ -0.59
UBXN2A-201ENST00000309033 MGAQ8IWI9 3026 aa11.34□□□□□ -0.59
UBXN2A-201ENST00000309033 CENPEQ02224 2701 aa11.32□□□□□ -0.6
UBXN2A-201ENST00000309033 A0A1B0GU33 70 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms