RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 RTL8CO15255 209 aa12.68□□□□□ -0.38
TSR1-201ENST00000301364 SPINK1P00995 79 aa12.68□□□□□ -0.38
TSR1-201ENST00000301364 IGFL1Q6UW32 110 aa12.68□□□□□ -0.38
TSR1-201ENST00000301364 KRTAP10-11P60412 298 aa12.67□□□□□ -0.38
TSR1-201ENST00000301364 IGKV2D-30A0A075B6S6 120 aa12.67□□□□□ -0.38
TSR1-201ENST00000301364 H7BZZ5 65 aa12.67□□□□□ -0.38
TSR1-201ENST00000301364 IGKV2-30P06310 120 aa12.67□□□□□ -0.38
TSR1-201ENST00000301364 HECTD1Q9ULT8 2610 aa12.65□□□□□ -0.38
TSR1-201ENST00000301364 FLNAP21333 2647 aaKnown RBP12.64□□□□□ -0.39
TSR1-201ENST00000301364 SPAG11AQ6PDA7 123 aa12.63□□□□□ -0.39
TSR1-201ENST00000301364 A0A1B0GU69 56 aa12.62□□□□□ -0.39
TSR1-201ENST00000301364 MKI67P46013 3256 aaKnown RBP12.62□□□□□ -0.39
TSR1-201ENST00000301364 KRTAP1-1Q07627 177 aa12.61□□□□□ -0.39
TSR1-201ENST00000301364 CFAP54Q96N23 3096 aa12.61□□□□□ -0.39
TSR1-201ENST00000301364 PRR15Q8IV56 129 aa12.61□□□□□ -0.39
TSR1-201ENST00000301364 SPACA4Q8TDM5 124 aa12.61□□□□□ -0.39
TSR1-201ENST00000301364 FLNBO75369 2602 aaKnown RBP12.61□□□□□ -0.39
TSR1-201ENST00000301364 LAMA3Q16787 3333 aa12.61□□□□□ -0.39
TSR1-201ENST00000301364 LOC101927531A0A1B0GV80 90 aa12.6□□□□□ -0.39
TSR1-201ENST00000301364 USP24Q9UPU5 2620 aa12.59□□□□□ -0.39
TSR1-201ENST00000301364 LINC00313P59037 77 aa12.59□□□□□ -0.39
TSR1-201ENST00000301364 C7orf65Q6ZTY9 151 aa12.58□□□□□ -0.4
TSR1-201ENST00000301364 LAMA2P24043 3122 aaKnown RBP12.58□□□□□ -0.4
TSR1-201ENST00000301364 MRPL34Q9BQ48 92 aaKnown RBP12.58□□□□□ -0.4
TSR1-201ENST00000301364 K7EIL1 84 aa12.56□□□□□ -0.4
TSR1-201ENST00000301364 C8orf87E5RJ46 101 aa12.56□□□□□ -0.4
TSR1-201ENST00000301364 ITPR3Q14573 2671 aa12.55□□□□□ -0.4
TSR1-201ENST00000301364 A0A1W2PNM2 257 aa12.55□□□□□ -0.4
TSR1-201ENST00000301364 IGLV5-48A0A075B6I7 105 aa12.54□□□□□ -0.4
TSR1-201ENST00000301364 C9orf163Q8N9P6 203 aa12.52□□□□□ -0.41
TSR1-201ENST00000301364 FAM229AH3BQW9 127 aa12.51□□□□□ -0.41
TSR1-201ENST00000301364 CENPEQ02224 2701 aa12.51□□□□□ -0.41
TSR1-201ENST00000301364 CYP4F30PQ9H0H9 118 aa12.51□□□□□ -0.41
TSR1-201ENST00000301364 COA5Q86WW8 74 aa12.51□□□□□ -0.41
TSR1-201ENST00000301364 IGLV5-37A0A075B6J1 123 aa12.5□□□□□ -0.41
TSR1-201ENST00000301364 A8MUN3 132 aa12.5□□□□□ -0.41
TSR1-201ENST00000301364 MGAQ8IWI9 3026 aa12.5□□□□□ -0.41
TSR1-201ENST00000301364 C8orf17Q9NRJ1 99 aa12.49□□□□□ -0.41
TSR1-201ENST00000301364 ZNF292O60281 2723 aa12.49□□□□□ -0.41
TSR1-201ENST00000301364 MGAM2Q2M2H8 2515 aa12.49□□□□□ -0.41
TSR1-201ENST00000301364 CNBPP62633 177 aaKnown RBP12.46□□□□□ -0.41
TSR1-201ENST00000301364 BRCA2P51587 3418 aa12.46□□□□□ -0.42
TSR1-201ENST00000301364 ATRQ13535 2644 aa12.45□□□□□ -0.42
TSR1-201ENST00000301364 A0A0G2JQZ4 141 aa12.45□□□□□ -0.42
TSR1-201ENST00000301364 A0A1W2PNN7 141 aa12.45□□□□□ -0.42
TSR1-201ENST00000301364 TYMSOSQ8TAI1 123 aa12.45□□□□□ -0.42
TSR1-201ENST00000301364 ZNF861PO60384 105 aa12.44□□□□□ -0.42
TSR1-201ENST00000301364 CASC10Q5T4H9 136 aa12.44□□□□□ -0.42
TSR1-201ENST00000301364 A0A1B0GVX0 72 aa12.44□□□□□ -0.42
TSR1-201ENST00000301364 LINC00336Q6ZUF6 198 aa12.43□□□□□ -0.42
TSR1-201ENST00000301364 SSBP3-AS1Q7Z2R9 100 aa12.42□□□□□ -0.42
TSR1-201ENST00000301364 OCR1Q9BZK8 76 aa12.39□□□□□ -0.43
TSR1-201ENST00000301364 ATP11AUNQ6ZP68 121 aa12.37□□□□□ -0.43
TSR1-201ENST00000301364 A0A087WTM6 91 aa12.37□□□□□ -0.43
TSR1-201ENST00000301364 SPANXA2-OT1Q8N9U9 137 aa12.36□□□□□ -0.43
TSR1-201ENST00000301364 SPRR4Q96PI1 79 aa12.35□□□□□ -0.43
TSR1-201ENST00000301364 CFAP46Q8IYW2 2715 aa12.35□□□□□ -0.43
TSR1-201ENST00000301364 WIPF1O43516 503 aa12.34□□□□□ -0.43
TSR1-201ENST00000301364 Q96NJ1 140 aa12.34□□□□□ -0.43
TSR1-201ENST00000301364 UNC80Q8N2C7 3258 aa12.33□□□□□ -0.44
TSR1-201ENST00000301364 WDFY4Q6ZS81 3184 aa12.33□□□□□ -0.44
TSR1-201ENST00000301364 HELZ2Q9BYK8 2649 aaKnown RBP12.32□□□□□ -0.44
TSR1-201ENST00000301364 APLNQ9ULZ1 77 aa12.32□□□□□ -0.44
TSR1-201ENST00000301364 PLA2G1BP04054 148 aaKnown RBP12.3□□□□□ -0.44
TSR1-201ENST00000301364 WWC2-AS2Q96NR7 200 aa12.3□□□□□ -0.44
TSR1-201ENST00000301364 PRUNE2Q8WUY3 3088 aa12.29□□□□□ -0.44
TSR1-201ENST00000301364 DSCR10P59022 87 aa12.28□□□□□ -0.44
TSR1-201ENST00000301364 Q8NDZ9 215 aa12.28□□□□□ -0.44
TSR1-201ENST00000301364 PSORS1C2Q9UIG4 136 aa12.27□□□□□ -0.45
TSR1-201ENST00000301364 CR1P17927 2039 aa12.25□□□□□ -0.45
TSR1-201ENST00000301364 UQCR11O14957 56 aa12.25□□□□□ -0.45
TSR1-201ENST00000301364 MAST4O15021 2626 aa12.24□□□□□ -0.45
TSR1-201ENST00000301364 IGLV7-43P04211 117 aa12.24□□□□□ -0.45
TSR1-201ENST00000301364 TRIOO75962 3097 aa12.23□□□□□ -0.45
TSR1-201ENST00000301364 ANAPC11Q9NYG5 84 aa12.21□□□□□ -0.45
TSR1-201ENST00000301364 IGLV8-61A0A075B6I0 122 aa12.21□□□□□ -0.45
TSR1-201ENST00000301364 AKAP13Q12802 2813 aa12.2□□□□□ -0.46
TSR1-201ENST00000301364 CHD6Q8TD26 2715 aa12.2□□□□□ -0.46
TSR1-201ENST00000301364 VPS13AQ96RL7 3174 aa12.2□□□□□ -0.46
TSR1-201ENST00000301364 SPRR1AP35321 89 aa12.2□□□□□ -0.46
TSR1-201ENST00000301364 Q1T7F1 81 aa12.15□□□□□ -0.46
TSR1-201ENST00000301364 XIRP2A4UGR9 3374 aa12.14□□□□□ -0.47
TSR1-201ENST00000301364 LINC00304Q8N9R0 145 aa12.13□□□□□ -0.47
TSR1-201ENST00000301364 CYSTM1Q9H1C7 97 aa12.12□□□□□ -0.47
TSR1-201ENST00000301364 MIR22HGQ0VDD5 57 aa12.11□□□□□ -0.47
TSR1-201ENST00000301364 FRYQ5TBA9 3013 aa12.09□□□□□ -0.47
TSR1-201ENST00000301364 CDH23Q9H251 3354 aa12.08□□□□□ -0.48
TSR1-201ENST00000301364 DSPP15924 2871 aaKnown RBP12.07□□□□□ -0.48
TSR1-201ENST00000301364 CD164Q04900 197 aa12.06□□□□□ -0.48
TSR1-201ENST00000301364 GCN1Q92616 2671 aaKnown RBP12.05□□□□□ -0.48
TSR1-201ENST00000301364 IGLV7-46A0A075B6I9 117 aa12.05□□□□□ -0.48
TSR1-201ENST00000301364 MAP1AP78559 2803 aaPredicted RBP12.04□□□□□ -0.48
TSR1-201ENST00000301364 Q5XG85 94 aa12.04□□□□□ -0.48
TSR1-201ENST00000301364 KRTAP26-1Q6PEX3 210 aa12.04□□□□□ -0.48
TSR1-201ENST00000301364 KTN1-AS1Q86SY8 53 aa12.04□□□□□ -0.48
TSR1-201ENST00000301364 CDC42SE1Q9NRR8 79 aa12.04□□□□□ -0.48
TSR1-201ENST00000301364 SPRR1BP22528 89 aa12.01□□□□□ -0.49
TSR1-201ENST00000301364 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12□□□□□ -0.49
TSR1-201ENST00000301364 MMP24-AS1A0A0U1RRL7 71 aa11.98□□□□□ -0.49
TSR1-201ENST00000301364 FP248Q71RG6 208 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms