RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 Q75L30 129 aa9.77□□□□□ -0.84
SCN3B-201ENST00000299333 C9orf163Q8N9P6 203 aa9.77□□□□□ -0.85
SCN3B-201ENST00000299333 FAM104AQ969W3 186 aa9.77□□□□□ -0.85
SCN3B-201ENST00000299333 TLN1Q9Y490 2541 aaKnown RBP9.77□□□□□ -0.85
SCN3B-201ENST00000299333 NCOR2Q9Y618 2525 aa9.75□□□□□ -0.85
SCN3B-201ENST00000299333 SETD2Q9BYW2 2564 aaPredicted RBP9.74□□□□□ -0.85
SCN3B-201ENST00000299333 DNAH10OSP0CZ25 163 aa9.74□□□□□ -0.85
SCN3B-201ENST00000299333 FAM229BQ4G0N7 80 aa9.73□□□□□ -0.85
SCN3B-201ENST00000299333 C9orf92A6NGG3 77 aa9.73□□□□□ -0.85
SCN3B-201ENST00000299333 PKD1L2Q7Z442 2459 aa9.73□□□□□ -0.85
SCN3B-201ENST00000299333 PRR26Q8N8Z3 221 aa9.72□□□□□ -0.85
SCN3B-201ENST00000299333 DMAC1Q96GE9 116 aa9.72□□□□□ -0.85
SCN3B-201ENST00000299333 FP248Q71RG6 208 aaPredicted RBP9.71□□□□□ -0.85
SCN3B-201ENST00000299333 KRTAP16-1A8MUX0 517 aa9.71□□□□□ -0.86
SCN3B-201ENST00000299333 A0A1W2PNM2 257 aa9.7□□□□□ -0.86
SCN3B-201ENST00000299333 C15orf56Q8N910 161 aa9.7□□□□□ -0.86
SCN3B-201ENST00000299333 USP9XQ93008 2570 aaPredicted RBP9.7□□□□□ -0.86
SCN3B-201ENST00000299333 Q8N1X5 172 aa9.7□□□□□ -0.86
SCN3B-201ENST00000299333 WDR87Q6ZQQ6 2873 aa9.69□□□□□ -0.86
SCN3B-201ENST00000299333 IGLV5-48A0A075B6I7 105 aa9.69□□□□□ -0.86
SCN3B-201ENST00000299333 LRRK2Q5S007 2527 aa9.69□□□□□ -0.86
SCN3B-201ENST00000299333 ANAPC11Q9NYG5 84 aa9.68□□□□□ -0.86
SCN3B-201ENST00000299333 COL4A2P08572 1712 aa9.67□□□□□ -0.86
SCN3B-201ENST00000299333 COL27A1Q8IZC6 1860 aaPredicted RBP9.66□□□□□ -0.86
SCN3B-201ENST00000299333 OCR1Q9BZK8 76 aa9.65□□□□□ -0.87
SCN3B-201ENST00000299333 PRR34Q9NV39 138 aa9.65□□□□□ -0.87
SCN3B-201ENST00000299333 COX6B2Q6YFQ2 88 aa9.64□□□□□ -0.87
SCN3B-201ENST00000299333 ZFYVE26Q68DK2 2539 aa9.64□□□□□ -0.87
SCN3B-201ENST00000299333 ZNF861PO60384 105 aa9.64□□□□□ -0.87
SCN3B-201ENST00000299333 LINC00483Q53H64 154 aa9.64□□□□□ -0.87
SCN3B-201ENST00000299333 LINC00304Q8N9R0 145 aa9.62□□□□□ -0.87
SCN3B-201ENST00000299333 ZNF575Q86XF7 245 aa9.61□□□□□ -0.87
SCN3B-201ENST00000299333 IGLV5-37A0A075B6J1 123 aa9.6□□□□□ -0.87
SCN3B-201ENST00000299333 Q8N9P0 234 aaPredicted RBP9.6□□□□□ -0.87
SCN3B-201ENST00000299333 Q5VV11 94 aa9.6□□□□□ -0.87
SCN3B-201ENST00000299333 SPINK7P58062 85 aa9.58□□□□□ -0.88
SCN3B-201ENST00000299333 GOLGB1Q14789 3259 aaKnown RBP9.58□□□□□ -0.88
SCN3B-201ENST00000299333 CYSTM1Q9H1C7 97 aa9.57□□□□□ -0.88
SCN3B-201ENST00000299333 TLX1NBP0CAT3 122 aa9.57□□□□□ -0.88
SCN3B-201ENST00000299333 LINC01558Q9Y6Z2 57 aa9.57□□□□□ -0.88
SCN3B-201ENST00000299333 A0A1B0GU33 70 aa9.56□□□□□ -0.88
SCN3B-201ENST00000299333 KRTAP24-1Q3LI83 254 aa9.53□□□□□ -0.88
SCN3B-201ENST00000299333 IGLV7-46A0A075B6I9 117 aa9.53□□□□□ -0.88
SCN3B-201ENST00000299333 SPRR4Q96PI1 79 aa9.52□□□□□ -0.89
SCN3B-201ENST00000299333 USP9YO00507 2555 aaPredicted RBP9.52□□□□□ -0.89
SCN3B-201ENST00000299333 PCSK5Q92824 1860 aa9.49□□□□□ -0.89
SCN3B-201ENST00000299333 GIG44P09565 113 aaPredicted RBP9.49□□□□□ -0.89
SCN3B-201ENST00000299333 PSORS1C2Q9UIG4 136 aa9.48□□□□□ -0.89
SCN3B-201ENST00000299333 ACANP16112 2415 aa9.48□□□□□ -0.89
SCN3B-201ENST00000299333 IGLV7-43P04211 117 aa9.47□□□□□ -0.89
SCN3B-201ENST00000299333 CASC10Q5T4H9 136 aa9.47□□□□□ -0.89
SCN3B-201ENST00000299333 OXTP01178 125 aa9.47□□□□□ -0.89
SCN3B-201ENST00000299333 HRES1P13985 223 aa9.46□□□□□ -0.9
SCN3B-201ENST00000299333 J3QL48 77 aa9.45□□□□□ -0.9
SCN3B-201ENST00000299333 PIEZO1Q92508 2521 aa9.44□□□□□ -0.9
SCN3B-201ENST00000299333 A0A087WTM6 91 aa9.44□□□□□ -0.9
SCN3B-201ENST00000299333 LINC00612Q8N6U2 182 aa9.43□□□□□ -0.9
SCN3B-201ENST00000299333 SMR3BP02814 79 aaPredicted RBP9.42□□□□□ -0.9
SCN3B-201ENST00000299333 KRTAP10-11P60412 298 aa9.41□□□□□ -0.9
SCN3B-201ENST00000299333 CAMK2N1Q7Z7J9 78 aa9.41□□□□□ -0.9
SCN3B-201ENST00000299333 C19orf73Q9NVV2 129 aa9.4□□□□□ -0.9
SCN3B-201ENST00000299333 CNBPP62633 177 aaKnown RBP9.4□□□□□ -0.9
SCN3B-201ENST00000299333 MTORP42345 2549 aa9.4□□□□□ -0.91
SCN3B-201ENST00000299333 A0A096LNT2 108 aa9.38□□□□□ -0.91
SCN3B-201ENST00000299333 WWC2-AS2Q96NR7 200 aa9.36□□□□□ -0.91
SCN3B-201ENST00000299333 EP400Q96L91 3159 aa9.34□□□□□ -0.91
SCN3B-201ENST00000299333 K7EIL1 84 aa9.34□□□□□ -0.92
SCN3B-201ENST00000299333 CR1P17927 2039 aa9.33□□□□□ -0.92
SCN3B-201ENST00000299333 ROMO1P60602 79 aa9.31□□□□□ -0.92
SCN3B-201ENST00000299333 MMP24-AS1A0A0U1RRL7 71 aa9.3□□□□□ -0.92
SCN3B-201ENST00000299333 ANKRD11Q6UB99 2663 aaPredicted RBP9.3□□□□□ -0.92
SCN3B-201ENST00000299333 CEP295Q9C0D2 2601 aa9.29□□□□□ -0.92
SCN3B-201ENST00000299333 CENPFP49454 3210 aa9.28□□□□□ -0.92
SCN3B-201ENST00000299333 CHD8Q9HCK8 2581 aa9.27□□□□□ -0.92
SCN3B-201ENST00000299333 KRTAP10-3P60369 221 aa9.27□□□□□ -0.93
SCN3B-201ENST00000299333 POLQO75417 2590 aa9.27□□□□□ -0.93
SCN3B-201ENST00000299333 NDUFAF8A1L188 74 aa9.25□□□□□ -0.93
SCN3B-201ENST00000299333 ASB16-AS1Q495Z4 193 aa9.24□□□□□ -0.93
SCN3B-201ENST00000299333 ANKRD17O75179 2603 aaKnown RBP9.23□□□□□ -0.93
SCN3B-201ENST00000299333 Q6ZSA8 131 aa9.2□□□□□ -0.94
SCN3B-201ENST00000299333 Q8NDZ9 215 aa9.18□□□□□ -0.94
SCN3B-201ENST00000299333 Q5W150 140 aa9.18□□□□□ -0.94
SCN3B-201ENST00000299333 ZCCHC13Q8WW36 166 aaKnown RBP9.17□□□□□ -0.94
SCN3B-201ENST00000299333 SPTBN4Q9H254 2564 aa9.16□□□□□ -0.94
SCN3B-201ENST00000299333 UTRNP46939 3433 aa9.16□□□□□ -0.94
SCN3B-201ENST00000299333 RPL37P61927 97 aaKnown RBP9.15□□□□□ -0.94
SCN3B-201ENST00000299333 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.14□□□□□ -0.95
SCN3B-201ENST00000299333 S4R3F8 94 aa9.14□□□□□ -0.95
SCN3B-201ENST00000299333 A6NN06 94 aa9.13□□□□□ -0.95
SCN3B-201ENST00000299333 H1FX-AS1Q4G0G2 97 aa9.11□□□□□ -0.95
SCN3B-201ENST00000299333 KRTAP25-1Q3LHN0 102 aa9.1□□□□□ -0.95
SCN3B-201ENST00000299333 LINC00472Q9H8W2 130 aa9.1□□□□□ -0.95
SCN3B-201ENST00000299333 SEC61BP60468 96 aaKnown RBP9.1□□□□□ -0.95
SCN3B-201ENST00000299333 ADM2Q7Z4H4 148 aa9.07□□□□□ -0.96
SCN3B-201ENST00000299333 SPRR1AP35321 89 aa9.05□□□□□ -0.96
SCN3B-201ENST00000299333 TNP2Q05952 138 aa9.05□□□□□ -0.96
SCN3B-201ENST00000299333 R4GN34 69 aa9.04□□□□□ -0.96
SCN3B-201ENST00000299333 USP24Q9UPU5 2620 aa9.03□□□□□ -0.96
SCN3B-201ENST00000299333 FLG2Q5D862 2391 aaPredicted RBP8.99□□□□□ -0.97
SCN3B-201ENST00000299333 M0R2T5 61 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 153 ms