RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 KRTAP1-1Q07627 177 aa10.89□□□□□ -0.67
SNAPC4-201ENST00000298532 IGLV8-61A0A075B6I0 122 aa10.88□□□□□ -0.67
SNAPC4-201ENST00000298532 K7EIL1 84 aa10.88□□□□□ -0.67
SNAPC4-201ENST00000298532 UQCR11O14957 56 aa10.88□□□□□ -0.67
SNAPC4-201ENST00000298532 C19orf73Q9NVV2 129 aa10.88□□□□□ -0.67
SNAPC4-201ENST00000298532 WIPF1O43516 503 aa10.86□□□□□ -0.67
SNAPC4-201ENST00000298532 PRRC2CQ9Y520 2896 aaKnown RBP10.86□□□□□ -0.67
SNAPC4-201ENST00000298532 KTN1-AS1Q86SY8 53 aa10.85□□□□□ -0.67
SNAPC4-201ENST00000298532 CHTF8P0CG12 524 aa10.84□□□□□ -0.67
SNAPC4-201ENST00000298532 ZNF575Q86XF7 245 aa10.84□□□□□ -0.67
SNAPC4-201ENST00000298532 C15orf56Q8N910 161 aa10.83□□□□□ -0.68
SNAPC4-201ENST00000298532 C8orf17Q9NRJ1 99 aa10.83□□□□□ -0.68
SNAPC4-201ENST00000298532 GIG44P09565 113 aaPredicted RBP10.82□□□□□ -0.68
SNAPC4-201ENST00000298532 GOLGB1Q14789 3259 aaKnown RBP10.82□□□□□ -0.68
SNAPC4-201ENST00000298532 LINC00612Q8N6U2 182 aa10.82□□□□□ -0.68
SNAPC4-201ENST00000298532 KRTAP10-11P60412 298 aa10.8□□□□□ -0.68
SNAPC4-201ENST00000298532 SPANXA2-OT1Q8N9U9 137 aa10.8□□□□□ -0.68
SNAPC4-201ENST00000298532 HELZ2Q9BYK8 2649 aaKnown RBP10.78□□□□□ -0.68
SNAPC4-201ENST00000298532 PLA2G2DQ9UNK4 145 aa10.78□□□□□ -0.68
SNAPC4-201ENST00000298532 A0A1W2PNM2 257 aa10.78□□□□□ -0.68
SNAPC4-201ENST00000298532 RTL8CO15255 209 aa10.77□□□□□ -0.68
SNAPC4-201ENST00000298532 MIR22HGQ0VDD5 57 aa10.77□□□□□ -0.69
SNAPC4-201ENST00000298532 KRTAP10-3P60369 221 aa10.77□□□□□ -0.69
SNAPC4-201ENST00000298532 LCA10Q71F78 164 aa10.77□□□□□ -0.69
SNAPC4-201ENST00000298532 A0A1B0GVX0 72 aa10.76□□□□□ -0.69
SNAPC4-201ENST00000298532 TLX1NBP0CAT3 122 aa10.76□□□□□ -0.69
SNAPC4-201ENST00000298532 SPINT4Q6UDR6 99 aa10.74□□□□□ -0.69
SNAPC4-201ENST00000298532 OCR1Q9BZK8 76 aa10.74□□□□□ -0.69
SNAPC4-201ENST00000298532 A0A0G2JQZ4 141 aa10.72□□□□□ -0.69
SNAPC4-201ENST00000298532 A0A1W2PNN7 141 aa10.72□□□□□ -0.69
SNAPC4-201ENST00000298532 IGLV5-48A0A075B6I7 105 aa10.72□□□□□ -0.69
SNAPC4-201ENST00000298532 Q96NJ1 140 aa10.72□□□□□ -0.69
SNAPC4-201ENST00000298532 Q1T7F1 81 aa10.71□□□□□ -0.69
SNAPC4-201ENST00000298532 TYMSOSQ8TAI1 123 aa10.7□□□□□ -0.7
SNAPC4-201ENST00000298532 CDC42SE1Q9NRR8 79 aa10.7□□□□□ -0.7
SNAPC4-201ENST00000298532 SSBP3-AS1Q7Z2R9 100 aa10.69□□□□□ -0.7
SNAPC4-201ENST00000298532 PLA2G1BP04054 148 aaKnown RBP10.68□□□□□ -0.7
SNAPC4-201ENST00000298532 FAM104AQ969W3 186 aa10.67□□□□□ -0.7
SNAPC4-201ENST00000298532 DSCR10P59022 87 aa10.65□□□□□ -0.7
SNAPC4-201ENST00000298532 Q5XG85 94 aa10.64□□□□□ -0.71
SNAPC4-201ENST00000298532 ZNF861PO60384 105 aa10.6□□□□□ -0.71
SNAPC4-201ENST00000298532 DNAH12Q6ZR08 3092 aa10.58□□□□□ -0.72
SNAPC4-201ENST00000298532 IGLV5-37A0A075B6J1 123 aa10.57□□□□□ -0.72
SNAPC4-201ENST00000298532 CYSTM1Q9H1C7 97 aa10.57□□□□□ -0.72
SNAPC4-201ENST00000298532 C9orf163Q8N9P6 203 aa10.57□□□□□ -0.72
SNAPC4-201ENST00000298532 SPRR4Q96PI1 79 aa10.56□□□□□ -0.72
SNAPC4-201ENST00000298532 FP248Q71RG6 208 aaPredicted RBP10.54□□□□□ -0.72
SNAPC4-201ENST00000298532 USP24Q9UPU5 2620 aa10.53□□□□□ -0.72
SNAPC4-201ENST00000298532 CRIPTQ9P021 101 aa10.53□□□□□ -0.72
SNAPC4-201ENST00000298532 FLNAP21333 2647 aaKnown RBP10.53□□□□□ -0.72
SNAPC4-201ENST00000298532 CHD9Q3L8U1 2897 aa10.53□□□□□ -0.72
SNAPC4-201ENST00000298532 ZNF292O60281 2723 aa10.52□□□□□ -0.73
SNAPC4-201ENST00000298532 APLNQ9ULZ1 77 aa10.51□□□□□ -0.73
SNAPC4-201ENST00000298532 CHD7Q9P2D1 2997 aa10.51□□□□□ -0.73
SNAPC4-201ENST00000298532 ITPR3Q14573 2671 aa10.5□□□□□ -0.73
SNAPC4-201ENST00000298532 IGLV7-46A0A075B6I9 117 aa10.5□□□□□ -0.73
SNAPC4-201ENST00000298532 CNBPP62633 177 aaKnown RBP10.49□□□□□ -0.73
SNAPC4-201ENST00000298532 Q75L30 129 aa10.49□□□□□ -0.73
SNAPC4-201ENST00000298532 PRR26Q8N8Z3 221 aa10.49□□□□□ -0.73
SNAPC4-201ENST00000298532 CASC10Q5T4H9 136 aa10.49□□□□□ -0.73
SNAPC4-201ENST00000298532 FAM229BQ4G0N7 80 aa10.48□□□□□ -0.73
SNAPC4-201ENST00000298532 J3QL48 77 aa10.48□□□□□ -0.73
SNAPC4-201ENST00000298532 CR1P17927 2039 aa10.48□□□□□ -0.73
SNAPC4-201ENST00000298532 CFAP46Q8IYW2 2715 aa10.47□□□□□ -0.73
SNAPC4-201ENST00000298532 MGAM2Q2M2H8 2515 aa10.47□□□□□ -0.73
SNAPC4-201ENST00000298532 BPTFQ12830 3046 aa10.47□□□□□ -0.73
SNAPC4-201ENST00000298532 A0A087WTM6 91 aa10.46□□□□□ -0.73
SNAPC4-201ENST00000298532 ANAPC11Q9NYG5 84 aa10.46□□□□□ -0.74
SNAPC4-201ENST00000298532 RBM12B-AS1Q9P1G2 102 aa10.46□□□□□ -0.74
SNAPC4-201ENST00000298532 CEP350Q5VT06 3117 aa10.44□□□□□ -0.74
SNAPC4-201ENST00000298532 Q8N9P0 234 aaPredicted RBP10.43□□□□□ -0.74
SNAPC4-201ENST00000298532 PSORS1C2Q9UIG4 136 aa10.42□□□□□ -0.74
SNAPC4-201ENST00000298532 IGLV7-43P04211 117 aa10.41□□□□□ -0.74
SNAPC4-201ENST00000298532 LINC00304Q8N9R0 145 aa10.41□□□□□ -0.74
SNAPC4-201ENST00000298532 LINC01558Q9Y6Z2 57 aa10.39□□□□□ -0.75
SNAPC4-201ENST00000298532 TRANK1O15050 2925 aa10.38□□□□□ -0.75
SNAPC4-201ENST00000298532 ATRQ13535 2644 aa10.37□□□□□ -0.75
SNAPC4-201ENST00000298532 Q8NDZ9 215 aa10.37□□□□□ -0.75
SNAPC4-201ENST00000298532 OXTP01178 125 aa10.37□□□□□ -0.75
SNAPC4-201ENST00000298532 Q8N1X5 172 aa10.35□□□□□ -0.75
SNAPC4-201ENST00000298532 UTRNP46939 3433 aa10.34□□□□□ -0.75
SNAPC4-201ENST00000298532 HTTP42858 3142 aa10.33□□□□□ -0.76
SNAPC4-201ENST00000298532 Q5VV11 94 aa10.33□□□□□ -0.76
SNAPC4-201ENST00000298532 MAST4O15021 2626 aa10.32□□□□□ -0.76
SNAPC4-201ENST00000298532 C9orf92A6NGG3 77 aa10.32□□□□□ -0.76
SNAPC4-201ENST00000298532 MMP24-AS1A0A0U1RRL7 71 aa10.31□□□□□ -0.76
SNAPC4-201ENST00000298532 LINC01554Q52M75 96 aa10.3□□□□□ -0.76
SNAPC4-201ENST00000298532 HRES1P13985 223 aa10.3□□□□□ -0.76
SNAPC4-201ENST00000298532 SPRR1AP35321 89 aa10.29□□□□□ -0.76
SNAPC4-201ENST00000298532 BAHCC1Q9P281 2608 aa10.25□□□□□ -0.77
SNAPC4-201ENST00000298532 A0A0D9SG42 100 aa10.24□□□□□ -0.77
SNAPC4-201ENST00000298532 KRTAP21-3Q3LHN1 58 aa10.23□□□□□ -0.77
SNAPC4-201ENST00000298532 A0A0C4DFX4 3053 aa10.21□□□□□ -0.77
SNAPC4-201ENST00000298532 PRAC1Q96KF2 57 aa10.21□□□□□ -0.77
SNAPC4-201ENST00000298532 A0A1B0GU33 70 aa10.21□□□□□ -0.78
SNAPC4-201ENST00000298532 LINC00472Q9H8W2 130 aa10.19□□□□□ -0.78
SNAPC4-201ENST00000298532 UNC79Q9P2D8 2635 aa10.19□□□□□ -0.78
SNAPC4-201ENST00000298532 SPRR1BP22528 89 aa10.16□□□□□ -0.78
SNAPC4-201ENST00000298532 SPINK7P58062 85 aa10.16□□□□□ -0.78
SNAPC4-201ENST00000298532 IGSF10Q6WRI0 2623 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms