RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 FAM229BQ4G0N7 80 aa10.47□□□□□ -0.73
UBAP1-201ENST00000297661 APOC4P55056 127 aa10.46□□□□□ -0.73
UBAP1-201ENST00000297661 MPLKIPQ8TAP9 179 aa10.46□□□□□ -0.74
UBAP1-201ENST00000297661 SPAG11BQ08648 103 aa10.45□□□□□ -0.74
UBAP1-201ENST00000297661 BPY2O14599 106 aa10.44□□□□□ -0.74
UBAP1-201ENST00000297661 C1orf195Q5TG92 126 aa10.43□□□□□ -0.74
UBAP1-201ENST00000297661 IGHV4-30-4P0DP06 118 aa10.43□□□□□ -0.74
UBAP1-201ENST00000297661 SPART-AS1P0CW21 52 aa10.42□□□□□ -0.74
UBAP1-201ENST00000297661 RETNQ9HD89 108 aa10.42□□□□□ -0.74
UBAP1-201ENST00000297661 TENM3Q9P273 2699 aa10.41□□□□□ -0.74
UBAP1-201ENST00000297661 XAGE1AQ9HD64 81 aa10.41□□□□□ -0.74
UBAP1-201ENST00000297661 IGLV6-57P01721 117 aa10.4□□□□□ -0.75
UBAP1-201ENST00000297661 KRTAP10-11P60412 298 aa10.4□□□□□ -0.75
UBAP1-201ENST00000297661 ERC2-IT1O76042 136 aa10.39□□□□□ -0.75
UBAP1-201ENST00000297661 LELP1Q5T871 98 aa10.39□□□□□ -0.75
UBAP1-201ENST00000297661 Q8N9L7 120 aa10.39□□□□□ -0.75
UBAP1-201ENST00000297661 V9GYY9 64 aa10.39□□□□□ -0.75
UBAP1-201ENST00000297661 H3BQ85 93 aa10.38□□□□□ -0.75
UBAP1-201ENST00000297661 MEGF8Q7Z7M0 2845 aa10.37□□□□□ -0.75
UBAP1-201ENST00000297661 PRYO14603 147 aa10.37□□□□□ -0.75
UBAP1-201ENST00000297661 HIGD2BQ4VC39 106 aa10.37□□□□□ -0.75
UBAP1-201ENST00000297661 FUSP35637 526 aaKnown RBP eCLIP10.36□□□□□ -0.75
UBAP1-201ENST00000297661 ESRGQ1W209 222 aa10.36□□□□□ -0.75
UBAP1-201ENST00000297661 WFDC10BQ8IUB3 73 aa10.35□□□□□ -0.75
UBAP1-201ENST00000297661 SEC61GP60059 68 aa10.35□□□□□ -0.75
UBAP1-201ENST00000297661 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.35□□□□□ -0.75
UBAP1-201ENST00000297661 DIRC1Q969H9 104 aa10.35□□□□□ -0.75
UBAP1-201ENST00000297661 OCR1Q9BZK8 76 aa10.35□□□□□ -0.75
UBAP1-201ENST00000297661 C6orf48Q9UBA6 75 aa10.35□□□□□ -0.75
UBAP1-201ENST00000297661 PRR34Q9NV39 138 aa10.34□□□□□ -0.75
UBAP1-201ENST00000297661 IGKV4-1P06312 121 aa10.33□□□□□ -0.76
UBAP1-201ENST00000297661 Q6ZTC4 211 aa10.33□□□□□ -0.76
UBAP1-201ENST00000297661 COX7BP24311 80 aa10.32□□□□□ -0.76
UBAP1-201ENST00000297661 A0A0J9YWU9 116 aa10.31□□□□□ -0.76
UBAP1-201ENST00000297661 HIGD2AQ9BW72 106 aa10.31□□□□□ -0.76
UBAP1-201ENST00000297661 ZNF73O43830 326 aaPredicted RBP10.3□□□□□ -0.76
UBAP1-201ENST00000297661 KPRPQ5T749 579 aaPredicted RBP10.3□□□□□ -0.76
UBAP1-201ENST00000297661 PRKDCP78527 4128 aaKnown RBP10.3□□□□□ -0.76
UBAP1-201ENST00000297661 DNAH3Q8TD57 4116 aa10.29□□□□□ -0.76
UBAP1-201ENST00000297661 TGP01266 2768 aa10.29□□□□□ -0.76
UBAP1-201ENST00000297661 ELOF1P60002 83 aaKnown RBP10.27□□□□□ -0.76
UBAP1-201ENST00000297661 CAMK2N2Q96S95 79 aa10.27□□□□□ -0.76
UBAP1-201ENST00000297661 FBN3Q75N90 2809 aa10.27□□□□□ -0.77
UBAP1-201ENST00000297661 EGFEM1PQ0D2K5 195 aa10.25□□□□□ -0.77
UBAP1-201ENST00000297661 Q6ZRU5 148 aa10.25□□□□□ -0.77
UBAP1-201ENST00000297661 K7EIL1 84 aa10.24□□□□□ -0.77
UBAP1-201ENST00000297661 COL7A1Q02388 2944 aa10.24□□□□□ -0.77
UBAP1-201ENST00000297661 LRCOL1A6NCL2 159 aa10.23□□□□□ -0.77
UBAP1-201ENST00000297661 C3orf84H3BNL1 204 aa10.23□□□□□ -0.77
UBAP1-201ENST00000297661 hDV103S1A0JD37 113 aa10.22□□□□□ -0.77
UBAP1-201ENST00000297661 GVQW2A0A096LPI5 108 aaPredicted RBP10.21□□□□□ -0.77
UBAP1-201ENST00000297661 C15orf56Q8N910 161 aa10.21□□□□□ -0.77
UBAP1-201ENST00000297661 KRTAP26-1Q6PEX3 210 aa10.21□□□□□ -0.78
UBAP1-201ENST00000297661 FAM30AQ9NZY2 134 aa10.21□□□□□ -0.78
UBAP1-201ENST00000297661 IGKV2D-24A0A075B6R9 120 aa10.2□□□□□ -0.78
UBAP1-201ENST00000297661 VPREB1P12018 145 aa10.2□□□□□ -0.78
UBAP1-201ENST00000297661 SMIM29Q86T20 159 aa10.2□□□□□ -0.78
UBAP1-201ENST00000297661 PRR15Q8IV56 129 aa10.2□□□□□ -0.78
UBAP1-201ENST00000297661 Q6ZRP5 223 aa10.18□□□□□ -0.78
UBAP1-201ENST00000297661 LINC00528Q8N1L1 170 aa10.18□□□□□ -0.78
UBAP1-201ENST00000297661 C1orf64Q8NEQ6 169 aa10.17□□□□□ -0.78
UBAP1-201ENST00000297661 PMAIP1Q13794 54 aa10.16□□□□□ -0.78
UBAP1-201ENST00000297661 Q1T7F1 81 aa10.16□□□□□ -0.78
UBAP1-201ENST00000297661 DEFB131BA0A096LNP1 70 aa10.14□□□□□ -0.79
UBAP1-201ENST00000297661 STAB2Q8WWQ8 2551 aa10.14□□□□□ -0.79
UBAP1-201ENST00000297661 LCE6AA0A183 80 aa10.13□□□□□ -0.79
UBAP1-201ENST00000297661 M0R378 163 aa10.13□□□□□ -0.79
UBAP1-201ENST00000297661 PSPHP1O15172 72 aa10.13□□□□□ -0.79
UBAP1-201ENST00000297661 DEFB105AQ8NG35 78 aa10.11□□□□□ -0.79
UBAP1-201ENST00000297661 C11orf45Q8TAV5 145 aa10.11□□□□□ -0.79
UBAP1-201ENST00000297661 DNAH9Q9NYC9 4486 aa10.1□□□□□ -0.79
UBAP1-201ENST00000297661 SERTAD4-AS1Q5TG53 156 aa10.1□□□□□ -0.79
UBAP1-201ENST00000297661 H3BNG1 76 aa10.1□□□□□ -0.79
UBAP1-201ENST00000297661 SYCNQ0VAF6 134 aa10.09□□□□□ -0.79
UBAP1-201ENST00000297661 HUWE1Q7Z6Z7 4374 aaKnown RBP10.09□□□□□ -0.79
UBAP1-201ENST00000297661 CASC10Q5T4H9 136 aa10.09□□□□□ -0.79
UBAP1-201ENST00000297661 ZCCHC13Q8WW36 166 aaKnown RBP10.09□□□□□ -0.79
UBAP1-201ENST00000297661 TRAV22A0A0B4J277 110 aa10.08□□□□□ -0.8
UBAP1-201ENST00000297661 PRR4Q16378 134 aa10.07□□□□□ -0.8
UBAP1-201ENST00000297661 LINC01556Q5JQF7 62 aa10.07□□□□□ -0.8
UBAP1-201ENST00000297661 Q8N377 158 aa10.07□□□□□ -0.8
UBAP1-201ENST00000297661 FAM168BA1KXE4 195 aa10.07□□□□□ -0.8
UBAP1-201ENST00000297661 RPL37AP8A6NKH3 93 aa10.07□□□□□ -0.8
UBAP1-201ENST00000297661 IGLV5-48A0A075B6I7 105 aa10.06□□□□□ -0.8
UBAP1-201ENST00000297661 ETDCA0A1B0GVM5 59 aa10.05□□□□□ -0.8
UBAP1-201ENST00000297661 NKAPP1Q8N9T2 125 aa10.05□□□□□ -0.8
UBAP1-201ENST00000297661 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.05□□□□□ -0.8
UBAP1-201ENST00000297661 A0A1W2PNM2 257 aa10.05□□□□□ -0.8
UBAP1-201ENST00000297661 C7orf33Q8WU49 177 aa10.05□□□□□ -0.8
UBAP1-201ENST00000297661 ST20-AS1Q8NBB2 130 aa10.02□□□□□ -0.81
UBAP1-201ENST00000297661 LYSTQ99698 3801 aa10.02□□□□□ -0.81
UBAP1-201ENST00000297661 CYP4F30PQ9H0H9 118 aa10.02□□□□□ -0.81
UBAP1-201ENST00000297661 DSCR10P59022 87 aa10.01□□□□□ -0.81
UBAP1-201ENST00000297661 LINC00588Q9Y4M8 146 aa10.01□□□□□ -0.81
UBAP1-201ENST00000297661 A8MUN3 132 aa10□□□□□ -0.81
UBAP1-201ENST00000297661 K7EQZ3 153 aa10□□□□□ -0.81
UBAP1-201ENST00000297661 PSCAO43653 123 aa10□□□□□ -0.81
UBAP1-201ENST00000297661 B9D2Q9BPU9 175 aa10□□□□□ -0.81
UBAP1-201ENST00000297661 A0A1B0GW54 56 aa10□□□□□ -0.81
UBAP1-201ENST00000297661 C1orf137Q5JT78 98 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms