RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 TRBV7-6A0A0J9YX20 115 aa14.51□□□□□ -0.09
PTX3-201ENST00000295927 COX7BP24311 80 aa14.51□□□□□ -0.09
PTX3-201ENST00000295927 RTL8CO15255 209 aa14.51□□□□□ -0.09
PTX3-201ENST00000295927 TNP2Q05952 138 aa14.51□□□□□ -0.09
PTX3-201ENST00000295927 ELOF1P60002 83 aaKnown RBP14.5□□□□□ -0.09
PTX3-201ENST00000295927 LINC00474Q9P2X8 69 aa14.48□□□□□ -0.09
PTX3-201ENST00000295927 HYDINQ4G0P3 5121 aa14.47□□□□□ -0.09
PTX3-201ENST00000295927 hADV29S1A0JD25 119 aa14.47□□□□□ -0.09
PTX3-201ENST00000295927 PRYO14603 147 aa14.47□□□□□ -0.09
PTX3-201ENST00000295927 SNCGO76070 127 aa14.47□□□□□ -0.09
PTX3-201ENST00000295927 HECTD4Q9Y4D8 3996 aa14.47□□□□□ -0.09
PTX3-201ENST00000295927 PANO1I0J062 215 aa14.47□□□□□ -0.09
PTX3-201ENST00000295927 K7ERU9 68 aa14.45□□□□□ -0.1
PTX3-201ENST00000295927 FRAS1Q86XX4 4008 aa14.45□□□□□ -0.1
PTX3-201ENST00000295927 LINC00528Q8N1L1 170 aa14.45□□□□□ -0.1
PTX3-201ENST00000295927 PPDPFLQ8WWR9 84 aa14.45□□□□□ -0.1
PTX3-201ENST00000295927 ORMDL1Q9P0S3 153 aa14.44□□□□□ -0.1
PTX3-201ENST00000295927 IGLV5-52A0A0A0MRZ9 124 aa14.43□□□□□ -0.1
PTX3-201ENST00000295927 SPRR1AP35321 89 aa14.43□□□□□ -0.1
PTX3-201ENST00000295927 TEX49A0A1B0GTD5 131 aa14.42□□□□□ -0.1
PTX3-201ENST00000295927 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.42□□□□□ -0.1
PTX3-201ENST00000295927 KRTAP4-16G5E9R7 235 aaPredicted RBP14.41□□□□□ -0.1
PTX3-201ENST00000295927 SPACA4Q8TDM5 124 aa14.41□□□□□ -0.1
PTX3-201ENST00000295927 PHF5AQ7RTV0 110 aaKnown RBP14.4□□□□□ -0.1
PTX3-201ENST00000295927 DPH3Q96FX2 82 aa14.4□□□□□ -0.1
PTX3-201ENST00000295927 REG3GQ6UW15 175 aa14.38□□□□□ -0.11
PTX3-201ENST00000295927 ETDCA0A1B0GVM5 59 aa14.37□□□□□ -0.11
PTX3-201ENST00000295927 B5MCH6 92 aa14.37□□□□□ -0.11
PTX3-201ENST00000295927 Q6ZQY7 126 aa14.37□□□□□ -0.11
PTX3-201ENST00000295927 J3QR89 54 aa14.37□□□□□ -0.11
PTX3-201ENST00000295927 SACSQ9NZJ4 4579 aa14.36□□□□□ -0.11
PTX3-201ENST00000295927 LCE6AA0A183 80 aa14.35□□□□□ -0.11
PTX3-201ENST00000295927 Q6ZRX8 168 aa14.35□□□□□ -0.11
PTX3-201ENST00000295927 TMEM256-PLSCR3K7ERE1 68 aa14.34□□□□□ -0.11
PTX3-201ENST00000295927 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.34□□□□□ -0.11
PTX3-201ENST00000295927 INAFM2P0DMQ5 153 aa14.33□□□□□ -0.11
PTX3-201ENST00000295927 KRTAP10-2P60368 255 aa14.33□□□□□ -0.11
PTX3-201ENST00000295927 UBE2BP63146 152 aa14.33□□□□□ -0.11
PTX3-201ENST00000295927 KRTAP11-1Q8IUC1 163 aa14.33□□□□□ -0.11
PTX3-201ENST00000295927 DNAH11Q96DT5 4516 aa14.33□□□□□ -0.12
PTX3-201ENST00000295927 EPM2AB3EWF7 344 aa14.33□□□□□ -0.12
PTX3-201ENST00000295927 Q9BRP9 147 aa14.31□□□□□ -0.12
PTX3-201ENST00000295927 FAT2Q9NYQ8 4349 aa14.3□□□□□ -0.12
PTX3-201ENST00000295927 DHRS4-AS1Q9P1J3 65 aa14.3□□□□□ -0.12
PTX3-201ENST00000295927 OBSCN-AS1Q96MR7 158 aa14.27□□□□□ -0.13
PTX3-201ENST00000295927 H3BQ85 93 aa14.26□□□□□ -0.13
PTX3-201ENST00000295927 FAM19A1Q7Z5A9 133 aa14.25□□□□□ -0.13
PTX3-201ENST00000295927 PLAC8Q9NZF1 115 aa14.25□□□□□ -0.13
PTX3-201ENST00000295927 DNAH5Q8TE73 4624 aa14.25□□□□□ -0.13
PTX3-201ENST00000295927 PKD1P98161 4303 aa14.24□□□□□ -0.13
PTX3-201ENST00000295927 A0A1B0GV72 72 aa14.23□□□□□ -0.13
PTX3-201ENST00000295927 GHRHP01286 108 aa14.23□□□□□ -0.13
PTX3-201ENST00000295927 PRLHP81277 87 aa14.22□□□□□ -0.13
PTX3-201ENST00000295927 JMJD7-PLA2G4BH0Y9G9 81 aa14.21□□□□□ -0.14
PTX3-201ENST00000295927 ERC2-IT1O76042 136 aa14.21□□□□□ -0.14
PTX3-201ENST00000295927 SMCR5Q8TEV8 140 aa14.21□□□□□ -0.14
PTX3-201ENST00000295927 C14orf132Q9NPU4 83 aa14.21□□□□□ -0.14
PTX3-201ENST00000295927 LAMTOR3Q9UHA4 124 aa14.2□□□□□ -0.14
PTX3-201ENST00000295927 VPS25Q9BRG1 176 aa14.19□□□□□ -0.14
PTX3-201ENST00000295927 DEFB105AQ8NG35 78 aa14.18□□□□□ -0.14
PTX3-201ENST00000295927 ST20-AS1Q8NBB2 130 aa14.17□□□□□ -0.14
PTX3-201ENST00000295927 DNAH8Q96JB1 4490 aa14.17□□□□□ -0.14
PTX3-201ENST00000295927 LINC01547P58512 204 aaPredicted RBP14.17□□□□□ -0.14
PTX3-201ENST00000295927 FAM30AQ9NZY2 134 aa14.17□□□□□ -0.14
PTX3-201ENST00000295927 BCE1O60756 84 aa14.15□□□□□ -0.14
PTX3-201ENST00000295927 Q8N377 158 aa14.15□□□□□ -0.14
PTX3-201ENST00000295927 H0Y9J4 135 aa14.15□□□□□ -0.14
PTX3-201ENST00000295927 KRTAP10-1P60331 282 aa14.15□□□□□ -0.14
PTX3-201ENST00000295927 HIGD2AQ9BW72 106 aa14.14□□□□□ -0.15
PTX3-201ENST00000295927 NDUFV3P56181 108 aaKnown RBP14.13□□□□□ -0.15
PTX3-201ENST00000295927 LINC00336Q6ZUF6 198 aa14.13□□□□□ -0.15
PTX3-201ENST00000295927 UBE2AP49459 152 aa14.13□□□□□ -0.15
PTX3-201ENST00000295927 RBM3P98179 157 aaKnown RBP14.13□□□□□ -0.15
PTX3-201ENST00000295927 IGLV5-48A0A075B6I7 105 aa14.12□□□□□ -0.15
PTX3-201ENST00000295927 CDIP1Q9H305 208 aa14.11□□□□□ -0.15
PTX3-201ENST00000295927 FAM240AA0A1B0GVK7 77 aa14.11□□□□□ -0.15
PTX3-201ENST00000295927 GAGE2AQ6NT46 116 aa14.11□□□□□ -0.15
PTX3-201ENST00000295927 Q6ZSA8 131 aa14.11□□□□□ -0.15
PTX3-201ENST00000295927 KRTAP13-1Q8IUC0 172 aa14.09□□□□□ -0.15
PTX3-201ENST00000295927 CIRBP-AS1Q8TBR5 109 aa14.09□□□□□ -0.15
PTX3-201ENST00000295927 PSORS1C2Q9UIG4 136 aa14.09□□□□□ -0.15
PTX3-201ENST00000295927 RYR2Q92736 4967 aa14.07□□□□□ -0.16
PTX3-201ENST00000295927 CCKP06307 115 aa14.06□□□□□ -0.16
PTX3-201ENST00000295927 ACYP1P07311 99 aa14.06□□□□□ -0.16
PTX3-201ENST00000295927 SCXQ7RTU7 201 aa14.05□□□□□ -0.16
PTX3-201ENST00000295927 C3orf22Q8N5N4 141 aa14.05□□□□□ -0.16
PTX3-201ENST00000295927 DSCR8Q96T75 97 aa14.05□□□□□ -0.16
PTX3-201ENST00000295927 LOC110117498A0A087WWA1 95 aa14.04□□□□□ -0.16
PTX3-201ENST00000295927 Q6ZQT0 140 aa14.03□□□□□ -0.16
PTX3-201ENST00000295927 KMT2CQ8NEZ4 4911 aaKnown RBP14.03□□□□□ -0.16
PTX3-201ENST00000295927 C1orf137Q5JT78 98 aa14.02□□□□□ -0.16
PTX3-201ENST00000295927 TRBV7-4A0A0J9YYF1 115 aa14.02□□□□□ -0.17
PTX3-201ENST00000295927 HAMPP81172 84 aa14.02□□□□□ -0.17
PTX3-201ENST00000295927 A0A1B0GVY2 172 aa14□□□□□ -0.17
PTX3-201ENST00000295927 PDE6GP18545 87 aa13.99□□□□□ -0.17
PTX3-201ENST00000295927 SMIM29Q86T20 159 aa13.99□□□□□ -0.17
PTX3-201ENST00000295927 SRRM2Q9UQ35 2752 aaKnown RBP13.98□□□□□ -0.17
PTX3-201ENST00000295927 XGP55808 180 aa13.96□□□□□ -0.17
PTX3-201ENST00000295927 ZNF861PO60384 105 aa13.94□□□□□ -0.18
PTX3-201ENST00000295927 SPRR1BP22528 89 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms