RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 CCKP06307 115 aa12.47□□□□□ -0.41
BRAF-201ENST00000288602 DYNC2H1Q8NCM8 4307 aaKnown RBP12.47□□□□□ -0.41
BRAF-201ENST00000288602 KRTAP7-1Q8IUC3 87 aa12.45□□□□□ -0.42
BRAF-201ENST00000288602 LINC00528Q8N1L1 170 aa12.45□□□□□ -0.42
BRAF-201ENST00000288602 UQCRQO14949 82 aa12.44□□□□□ -0.42
BRAF-201ENST00000288602 PSCAO43653 123 aa12.44□□□□□ -0.42
BRAF-201ENST00000288602 RBM3P98179 157 aaKnown RBP12.44□□□□□ -0.42
BRAF-201ENST00000288602 TRBV7-6A0A0J9YX20 115 aa12.43□□□□□ -0.42
BRAF-201ENST00000288602 FAM19A5Q7Z5A7 132 aaPredicted RBP12.43□□□□□ -0.42
BRAF-201ENST00000288602 KCNQ1DNQ9H478 68 aa12.42□□□□□ -0.42
BRAF-201ENST00000288602 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.42□□□□□ -0.42
BRAF-201ENST00000288602 DNHD1Q96M86 4753 aa12.41□□□□□ -0.42
BRAF-201ENST00000288602 IGKV3D-7A0A0C4DH55 119 aa12.41□□□□□ -0.42
BRAF-201ENST00000288602 M0R2N4 97 aa12.41□□□□□ -0.42
BRAF-201ENST00000288602 STARD9Q9P2P6 4700 aa12.4□□□□□ -0.42
BRAF-201ENST00000288602 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.39□□□□□ -0.43
BRAF-201ENST00000288602 LOC107984640A0A0U1RRK4 108 aa12.39□□□□□ -0.43
BRAF-201ENST00000288602 Q6ZQT0 140 aa12.38□□□□□ -0.43
BRAF-201ENST00000288602 PLA2G2DQ9UNK4 145 aa12.38□□□□□ -0.43
BRAF-201ENST00000288602 COX7CP15954 63 aa12.38□□□□□ -0.43
BRAF-201ENST00000288602 MEGF8Q7Z7M0 2845 aa12.37□□□□□ -0.43
BRAF-201ENST00000288602 IGLV1-50A0A075B6I6 118 aa12.36□□□□□ -0.43
BRAF-201ENST00000288602 IGKV2-24A0A0C4DH68 120 aa12.36□□□□□ -0.43
BRAF-201ENST00000288602 DSCR8Q96T75 97 aa12.36□□□□□ -0.43
BRAF-201ENST00000288602 HIST1H4AP62805 103 aaKnown RBP12.35□□□□□ -0.43
BRAF-201ENST00000288602 DEFB105AQ8NG35 78 aa12.35□□□□□ -0.43
BRAF-201ENST00000288602 A0A096LNI7 61 aa12.34□□□□□ -0.43
BRAF-201ENST00000288602 MRPL55Q7Z7F7 128 aaKnown RBP12.34□□□□□ -0.43
BRAF-201ENST00000288602 IGLV5-37A0A075B6J1 123 aa12.34□□□□□ -0.43
BRAF-201ENST00000288602 ATOX1O00244 68 aa12.34□□□□□ -0.43
BRAF-201ENST00000288602 LOC110117498A0A087WWA1 95 aa12.33□□□□□ -0.44
BRAF-201ENST00000288602 NUPR2A6NF83 97 aa12.31□□□□□ -0.44
BRAF-201ENST00000288602 KRTAP4-16G5E9R7 235 aaPredicted RBP12.31□□□□□ -0.44
BRAF-201ENST00000288602 Q6JHZ5 121 aa12.31□□□□□ -0.44
BRAF-201ENST00000288602 Q9BRP9 147 aa12.31□□□□□ -0.44
BRAF-201ENST00000288602 H3BQ85 93 aa12.3□□□□□ -0.44
BRAF-201ENST00000288602 Q6ZRX8 168 aa12.3□□□□□ -0.44
BRAF-201ENST00000288602 A0A087WVE0 104 aa12.3□□□□□ -0.44
BRAF-201ENST00000288602 CRYGAP11844 174 aa12.3□□□□□ -0.44
BRAF-201ENST00000288602 NBDYA0A0U1RRE5 68 aa12.29□□□□□ -0.44
BRAF-201ENST00000288602 ETDCA0A1B0GVM5 59 aa12.29□□□□□ -0.44
BRAF-201ENST00000288602 CNBPP62633 177 aaKnown RBP12.29□□□□□ -0.44
BRAF-201ENST00000288602 A0A1W2PNN7 141 aa12.29□□□□□ -0.44
BRAF-201ENST00000288602 PRYO14603 147 aa12.29□□□□□ -0.44
BRAF-201ENST00000288602 CYSTM1Q9H1C7 97 aa12.28□□□□□ -0.44
BRAF-201ENST00000288602 TRBV7-4A0A0J9YYF1 115 aa12.27□□□□□ -0.45
BRAF-201ENST00000288602 GHRHP01286 108 aa12.27□□□□□ -0.45
BRAF-201ENST00000288602 CHTF8P0CG12 524 aa12.27□□□□□ -0.45
BRAF-201ENST00000288602 SPRR1AP35321 89 aa12.27□□□□□ -0.45
BRAF-201ENST00000288602 C16orf90A8MZG2 172 aa12.27□□□□□ -0.45
BRAF-201ENST00000288602 Q8N377 158 aa12.27□□□□□ -0.45
BRAF-201ENST00000288602 UBL5Q9BZL1 73 aa12.26□□□□□ -0.45
BRAF-201ENST00000288602 ST20-AS1Q8NBB2 130 aa12.26□□□□□ -0.45
BRAF-201ENST00000288602 J3KT08 172 aa12.25□□□□□ -0.45
BRAF-201ENST00000288602 KMT2AQ03164 3969 aa12.25□□□□□ -0.45
BRAF-201ENST00000288602 ERC2-IT1O76042 136 aa12.24□□□□□ -0.45
BRAF-201ENST00000288602 LRCOL1A6NCL2 159 aa12.23□□□□□ -0.45
BRAF-201ENST00000288602 LINC01547P58512 204 aaPredicted RBP12.23□□□□□ -0.45
BRAF-201ENST00000288602 DHRS4-AS1Q9P1J3 65 aa12.23□□□□□ -0.45
BRAF-201ENST00000288602 REG3GQ6UW15 175 aa12.22□□□□□ -0.45
BRAF-201ENST00000288602 UBE2BP63146 152 aa12.22□□□□□ -0.45
BRAF-201ENST00000288602 PDE6GP18545 87 aa12.21□□□□□ -0.45
BRAF-201ENST00000288602 SERP2Q8N6R1 65 aa12.21□□□□□ -0.45
BRAF-201ENST00000288602 Q6ZRN7 208 aaPredicted RBP12.21□□□□□ -0.45
BRAF-201ENST00000288602 C14orf177Q52M58 125 aa12.2□□□□□ -0.46
BRAF-201ENST00000288602 FAM19A1Q7Z5A9 133 aa12.2□□□□□ -0.46
BRAF-201ENST00000288602 VPS13DQ5THJ4 4388 aa12.2□□□□□ -0.46
BRAF-201ENST00000288602 Q6ZVQ6 151 aa12.2□□□□□ -0.46
BRAF-201ENST00000288602 HAMPP81172 84 aa12.19□□□□□ -0.46
BRAF-201ENST00000288602 FUSP35637 526 aaKnown RBP eCLIP12.17□□□□□ -0.46
BRAF-201ENST00000288602 PRLHP81277 87 aa12.17□□□□□ -0.46
BRAF-201ENST00000288602 PHF5AQ7RTV0 110 aaKnown RBP12.17□□□□□ -0.46
BRAF-201ENST00000288602 KRTAP11-1Q8IUC1 163 aa12.17□□□□□ -0.46
BRAF-201ENST00000288602 C9orf163Q8N9P6 203 aa12.16□□□□□ -0.46
BRAF-201ENST00000288602 SRRM2Q9UQ35 2752 aaKnown RBP12.14□□□□□ -0.47
BRAF-201ENST00000288602 PANO1I0J062 215 aa12.14□□□□□ -0.47
BRAF-201ENST00000288602 TMEM258P61165 79 aa12.14□□□□□ -0.47
BRAF-201ENST00000288602 RPS28P62857 69 aaKnown RBP12.14□□□□□ -0.47
BRAF-201ENST00000288602 ATP5EP2Q5VTU8 51 aa12.14□□□□□ -0.47
BRAF-201ENST00000288602 SCXQ7RTU7 201 aa12.14□□□□□ -0.47
BRAF-201ENST00000288602 TGP01266 2768 aa12.13□□□□□ -0.47
BRAF-201ENST00000288602 C3orf84H3BNL1 204 aa12.12□□□□□ -0.47
BRAF-201ENST00000288602 DPH3Q96FX2 82 aa12.12□□□□□ -0.47
BRAF-201ENST00000288602 IGLV5-48A0A075B6I7 105 aa12.11□□□□□ -0.47
BRAF-201ENST00000288602 HIGD2AQ9BW72 106 aa12.1□□□□□ -0.47
BRAF-201ENST00000288602 HECTD4Q9Y4D8 3996 aa12.09□□□□□ -0.47
BRAF-201ENST00000288602 DNAH2Q9P225 4427 aa12.09□□□□□ -0.47
BRAF-201ENST00000288602 FBN3Q75N90 2809 aa12.08□□□□□ -0.48
BRAF-201ENST00000288602 C5orf47Q569G3 176 aa12.08□□□□□ -0.48
BRAF-201ENST00000288602 OXTP01178 125 aa12.06□□□□□ -0.48
BRAF-201ENST00000288602 TNP2Q05952 138 aa12.06□□□□□ -0.48
BRAF-201ENST00000288602 C1orf137Q5JT78 98 aa12.06□□□□□ -0.48
BRAF-201ENST00000288602 A0A0G2JQZ4 141 aa12.05□□□□□ -0.48
BRAF-201ENST00000288602 SMIM29Q86T20 159 aa12.05□□□□□ -0.48
BRAF-201ENST00000288602 A0A087WTM6 91 aa12.04□□□□□ -0.48
BRAF-201ENST00000288602 A0A1W2PNM2 257 aa12.04□□□□□ -0.48
BRAF-201ENST00000288602 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.04□□□□□ -0.48
BRAF-201ENST00000288602 CXCL6P80162 114 aa12.02□□□□□ -0.49
BRAF-201ENST00000288602 EPM2AB3EWF7 344 aa12.01□□□□□ -0.49
BRAF-201ENST00000288602 NREPQ16612 68 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms