RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 M0R378 163 aa8.57□□□□□ -1.04
C9orf3-201ENST00000277198 VPREB1P12018 145 aa8.57□□□□□ -1.04
C9orf3-201ENST00000277198 UPK3BQ9BT76 320 aa8.57□□□□□ -1.04
C9orf3-201ENST00000277198 XAGE1AQ9HD64 81 aa8.56□□□□□ -1.04
C9orf3-201ENST00000277198 NDUFC2-KCTD14E9PQ53 114 aa8.55□□□□□ -1.04
C9orf3-201ENST00000277198 RPS28P62857 69 aaKnown RBP8.55□□□□□ -1.04
C9orf3-201ENST00000277198 WFDC10BQ8IUB3 73 aa8.55□□□□□ -1.04
C9orf3-201ENST00000277198 RYR2Q92736 4967 aa8.55□□□□□ -1.04
C9orf3-201ENST00000277198 TMEM258P61165 79 aa8.55□□□□□ -1.04
C9orf3-201ENST00000277198 PLECQ15149 4684 aaKnown RBP8.54□□□□□ -1.04
C9orf3-201ENST00000277198 TRBV7-4A0A0J9YYF1 115 aa8.53□□□□□ -1.04
C9orf3-201ENST00000277198 CXCL6P80162 114 aa8.53□□□□□ -1.04
C9orf3-201ENST00000277198 LINC01556Q5JQF7 62 aa8.52□□□□□ -1.05
C9orf3-201ENST00000277198 FAM19A1Q7Z5A9 133 aa8.52□□□□□ -1.05
C9orf3-201ENST00000277198 C15orf56Q8N910 161 aa8.52□□□□□ -1.05
C9orf3-201ENST00000277198 J3KT08 172 aa8.52□□□□□ -1.05
C9orf3-201ENST00000277198 LINC01547P58512 204 aaPredicted RBP8.52□□□□□ -1.05
C9orf3-201ENST00000277198 HIGD2BQ4VC39 106 aa8.52□□□□□ -1.05
C9orf3-201ENST00000277198 Q6ZRU5 148 aa8.52□□□□□ -1.05
C9orf3-201ENST00000277198 Q6ZVQ6 151 aa8.52□□□□□ -1.05
C9orf3-201ENST00000277198 C1orf43Q9BWL3 253 aa8.52□□□□□ -1.05
C9orf3-201ENST00000277198 ESRGQ1W209 222 aa8.5□□□□□ -1.05
C9orf3-201ENST00000277198 Q6ZTC4 211 aa8.5□□□□□ -1.05
C9orf3-201ENST00000277198 LINC00528Q8N1L1 170 aa8.5□□□□□ -1.05
C9orf3-201ENST00000277198 HYDINQ4G0P3 5121 aa8.5□□□□□ -1.05
C9orf3-201ENST00000277198 LCE6AA0A183 80 aa8.47□□□□□ -1.05
C9orf3-201ENST00000277198 M0R2N4 97 aa8.47□□□□□ -1.05
C9orf3-201ENST00000277198 HAMPP81172 84 aa8.47□□□□□ -1.05
C9orf3-201ENST00000277198 CYSTM1Q9H1C7 97 aa8.47□□□□□ -1.05
C9orf3-201ENST00000277198 DNAH1Q9P2D7 4330 aa8.47□□□□□ -1.05
C9orf3-201ENST00000277198 TRAV7A0A075B6U4 112 aa8.46□□□□□ -1.05
C9orf3-201ENST00000277198 LOC107984640A0A0U1RRK4 108 aa8.46□□□□□ -1.05
C9orf3-201ENST00000277198 SYCNQ0VAF6 134 aa8.46□□□□□ -1.05
C9orf3-201ENST00000277198 ALMS1Q8TCU4 4167 aa8.46□□□□□ -1.05
C9orf3-201ENST00000277198 Q6ZRP5 223 aa8.46□□□□□ -1.06
C9orf3-201ENST00000277198 KCNQ1DNQ9H478 68 aa8.46□□□□□ -1.06
C9orf3-201ENST00000277198 TLX1NBP0CAT3 122 aa8.45□□□□□ -1.06
C9orf3-201ENST00000277198 DNAH10OSP0CZ25 163 aa8.45□□□□□ -1.06
C9orf3-201ENST00000277198 IGKV2D-24A0A075B6R9 120 aa8.44□□□□□ -1.06
C9orf3-201ENST00000277198 DEFB131BA0A096LNP1 70 aa8.44□□□□□ -1.06
C9orf3-201ENST00000277198 PLA2G2DQ9UNK4 145 aa8.44□□□□□ -1.06
C9orf3-201ENST00000277198 C11orf45Q8TAV5 145 aa8.44□□□□□ -1.06
C9orf3-201ENST00000277198 DPH3Q96FX2 82 aa8.43□□□□□ -1.06
C9orf3-201ENST00000277198 KMT2AQ03164 3969 aa8.42□□□□□ -1.06
C9orf3-201ENST00000277198 A0A1B0GW54 56 aa8.42□□□□□ -1.06
C9orf3-201ENST00000277198 NKAPP1Q8N9T2 125 aa8.42□□□□□ -1.06
C9orf3-201ENST00000277198 NUPR2A6NF83 97 aa8.4□□□□□ -1.06
C9orf3-201ENST00000277198 IGLV5-37A0A075B6J1 123 aa8.39□□□□□ -1.07
C9orf3-201ENST00000277198 KLKP1Q107X0 134 aa8.39□□□□□ -1.07
C9orf3-201ENST00000277198 C20orf197Q8N268 126 aa8.39□□□□□ -1.07
C9orf3-201ENST00000277198 DHRS4-AS1Q9P1J3 65 aa8.39□□□□□ -1.07
C9orf3-201ENST00000277198 C7orf33Q8WU49 177 aa8.39□□□□□ -1.07
C9orf3-201ENST00000277198 LINC00476Q8WZB0 136 aa8.39□□□□□ -1.07
C9orf3-201ENST00000277198 IGLV5-48A0A075B6I7 105 aa8.38□□□□□ -1.07
C9orf3-201ENST00000277198 LY6G6CO95867 125 aa8.37□□□□□ -1.07
C9orf3-201ENST00000277198 FAM19A5Q7Z5A7 132 aaPredicted RBP8.37□□□□□ -1.07
C9orf3-201ENST00000277198 TRAV10A0A0B4J240 114 aa8.37□□□□□ -1.07
C9orf3-201ENST00000277198 PRYO14603 147 aa8.37□□□□□ -1.07
C9orf3-201ENST00000277198 SERTAD4-AS1Q5TG53 156 aa8.36□□□□□ -1.07
C9orf3-201ENST00000277198 RMI2Q96E14 147 aa8.36□□□□□ -1.07
C9orf3-201ENST00000277198 SPRR1AP35321 89 aa8.35□□□□□ -1.07
C9orf3-201ENST00000277198 Q6ZRX8 168 aa8.35□□□□□ -1.07
C9orf3-201ENST00000277198 EPPK1P58107 5090 aaKnown RBP8.35□□□□□ -1.07
C9orf3-201ENST00000277198 VPS13DQ5THJ4 4388 aa8.35□□□□□ -1.07
C9orf3-201ENST00000277198 NREPQ16612 68 aa8.35□□□□□ -1.07
C9orf3-201ENST00000277198 Q8N377 158 aa8.35□□□□□ -1.07
C9orf3-201ENST00000277198 IGLV1-50A0A075B6I6 118 aa8.34□□□□□ -1.07
C9orf3-201ENST00000277198 KRTAP4-16G5E9R7 235 aaPredicted RBP8.34□□□□□ -1.07
C9orf3-201ENST00000277198 H7BZZ5 65 aa8.34□□□□□ -1.07
C9orf3-201ENST00000277198 NDUFC1O43677 76 aa8.34□□□□□ -1.07
C9orf3-201ENST00000277198 ERC2-IT1O76042 136 aa8.33□□□□□ -1.08
C9orf3-201ENST00000277198 FAM236DA0A1B0GTK5 79 aa8.33□□□□□ -1.08
C9orf3-201ENST00000277198 FAM236CP0DP71 79 aa8.33□□□□□ -1.08
C9orf3-201ENST00000277198 APLNQ9ULZ1 77 aa8.33□□□□□ -1.08
C9orf3-201ENST00000277198 FRAS1Q86XX4 4008 aa8.33□□□□□ -1.08
C9orf3-201ENST00000277198 FUSP35637 526 aaKnown RBP eCLIP8.31□□□□□ -1.08
C9orf3-201ENST00000277198 LINC00588Q9Y4M8 146 aa8.31□□□□□ -1.08
C9orf3-201ENST00000277198 SCXQ7RTU7 201 aa8.31□□□□□ -1.08
C9orf3-201ENST00000277198 ETDCA0A1B0GVM5 59 aa8.3□□□□□ -1.08
C9orf3-201ENST00000277198 BPY2O14599 106 aa8.3□□□□□ -1.08
C9orf3-201ENST00000277198 IGKV4-1P06312 121 aa8.3□□□□□ -1.08
C9orf3-201ENST00000277198 TNP2Q05952 138 aa8.3□□□□□ -1.08
C9orf3-201ENST00000277198 DEFB105AQ8NG35 78 aa8.29□□□□□ -1.08
C9orf3-201ENST00000277198 Q9BRP9 147 aa8.29□□□□□ -1.08
C9orf3-201ENST00000277198 EPM2AB3EWF7 344 aa8.28□□□□□ -1.08
C9orf3-201ENST00000277198 SERP1Q9Y6X1 66 aa8.28□□□□□ -1.08
C9orf3-201ENST00000277198 OXTP01178 125 aa8.27□□□□□ -1.09
C9orf3-201ENST00000277198 ATP5EP56381 51 aaPredicted RBP8.27□□□□□ -1.09
C9orf3-201ENST00000277198 MRPL55Q7Z7F7 128 aaKnown RBP8.27□□□□□ -1.09
C9orf3-201ENST00000277198 RPL37AP8A6NKH3 93 aa8.26□□□□□ -1.09
C9orf3-201ENST00000277198 DNAH6Q9C0G6 4158 aa8.26□□□□□ -1.09
C9orf3-201ENST00000277198 Q8NBF4 154 aa8.26□□□□□ -1.09
C9orf3-201ENST00000277198 SPRR4Q96PI1 79 aa8.26□□□□□ -1.09
C9orf3-201ENST00000277198 FAM168BA1KXE4 195 aa8.25□□□□□ -1.09
C9orf3-201ENST00000277198 C1orf137Q5JT78 98 aa8.25□□□□□ -1.09
C9orf3-201ENST00000277198 KRTAP7-1Q8IUC3 87 aa8.25□□□□□ -1.09
C9orf3-201ENST00000277198 DNAH10Q8IVF4 4471 aa8.25□□□□□ -1.09
C9orf3-201ENST00000277198 OCR1Q9BZK8 76 aa8.24□□□□□ -1.09
C9orf3-201ENST00000277198 SNURFQ9Y675 71 aa8.24□□□□□ -1.09
C9orf3-201ENST00000277198 A0A1W2PNM2 257 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms