RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 CCDC179H3BU77 68 aa14.84□□□□□ -0.03
RAB40B-201ENST00000269347 LINC00528Q8N1L1 170 aa14.84□□□□□ -0.03
RAB40B-201ENST00000269347 FBN3Q75N90 2809 aa14.84□□□□□ -0.03
RAB40B-201ENST00000269347 NKAPP1Q8N9T2 125 aa14.84□□□□□ -0.03
RAB40B-201ENST00000269347 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.83□□□□□ -0.04
RAB40B-201ENST00000269347 NUPR2A6NF83 97 aa14.83□□□□□ -0.04
RAB40B-201ENST00000269347 Q6JHZ5 121 aa14.82□□□□□ -0.04
RAB40B-201ENST00000269347 FAM19A5Q7Z5A7 132 aaPredicted RBP14.82□□□□□ -0.04
RAB40B-201ENST00000269347 KCNQ1DNQ9H478 68 aa14.82□□□□□ -0.04
RAB40B-201ENST00000269347 PLA2G2DQ9UNK4 145 aa14.82□□□□□ -0.04
RAB40B-201ENST00000269347 PSCAO43653 123 aa14.81□□□□□ -0.04
RAB40B-201ENST00000269347 A0A096LNI7 61 aa14.8□□□□□ -0.04
RAB40B-201ENST00000269347 NBDYA0A0U1RRE5 68 aa14.8□□□□□ -0.04
RAB40B-201ENST00000269347 IGKV3D-7A0A0C4DH55 119 aa14.79□□□□□ -0.04
RAB40B-201ENST00000269347 B5MCH6 92 aa14.79□□□□□ -0.04
RAB40B-201ENST00000269347 IGLV5-37A0A075B6J1 123 aa14.78□□□□□ -0.04
RAB40B-201ENST00000269347 TRBV7-6A0A0J9YX20 115 aa14.78□□□□□ -0.04
RAB40B-201ENST00000269347 LOC107984640A0A0U1RRK4 108 aa14.78□□□□□ -0.04
RAB40B-201ENST00000269347 Q6ZRN7 208 aaPredicted RBP14.78□□□□□ -0.04
RAB40B-201ENST00000269347 LAMTOR3Q9UHA4 124 aa14.78□□□□□ -0.04
RAB40B-201ENST00000269347 TGP01266 2768 aa14.78□□□□□ -0.04
RAB40B-201ENST00000269347 IGLV1-50A0A075B6I6 118 aa14.77□□□□□ -0.04
RAB40B-201ENST00000269347 LRCOL1A6NCL2 159 aa14.77□□□□□ -0.04
RAB40B-201ENST00000269347 M0R2N4 97 aa14.77□□□□□ -0.04
RAB40B-201ENST00000269347 RBM3P98179 157 aaKnown RBP14.77□□□□□ -0.04
RAB40B-201ENST00000269347 HECTD4Q9Y4D8 3996 aa14.77□□□□□ -0.05
RAB40B-201ENST00000269347 KRTAP4-16G5E9R7 235 aaPredicted RBP14.76□□□□□ -0.05
RAB40B-201ENST00000269347 H3BQ85 93 aa14.76□□□□□ -0.05
RAB40B-201ENST00000269347 CNBPP62633 177 aaKnown RBP14.76□□□□□ -0.05
RAB40B-201ENST00000269347 IGKV2-24A0A0C4DH68 120 aa14.75□□□□□ -0.05
RAB40B-201ENST00000269347 A0A1W2PNN7 141 aa14.74□□□□□ -0.05
RAB40B-201ENST00000269347 CHTF8P0CG12 524 aa14.73□□□□□ -0.05
RAB40B-201ENST00000269347 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.73□□□□□ -0.05
RAB40B-201ENST00000269347 Q6ZQT0 140 aa14.72□□□□□ -0.05
RAB40B-201ENST00000269347 LOC110117498A0A087WWA1 95 aa14.71□□□□□ -0.05
RAB40B-201ENST00000269347 MRPL55Q7Z7F7 128 aaKnown RBP14.71□□□□□ -0.05
RAB40B-201ENST00000269347 Q9BRP9 147 aa14.71□□□□□ -0.05
RAB40B-201ENST00000269347 SPRR1AP35321 89 aa14.7□□□□□ -0.06
RAB40B-201ENST00000269347 HIST1H4AP62805 103 aaKnown RBP14.69□□□□□ -0.06
RAB40B-201ENST00000269347 DSCR8Q96T75 97 aa14.68□□□□□ -0.06
RAB40B-201ENST00000269347 DNAH17Q9UFH2 4485 aa14.68□□□□□ -0.06
RAB40B-201ENST00000269347 C16orf90A8MZG2 172 aa14.68□□□□□ -0.06
RAB40B-201ENST00000269347 GHRHP01286 108 aa14.68□□□□□ -0.06
RAB40B-201ENST00000269347 FUSP35637 526 aaKnown RBP eCLIP14.68□□□□□ -0.06
RAB40B-201ENST00000269347 KRTAP11-1Q8IUC1 163 aa14.67□□□□□ -0.06
RAB40B-201ENST00000269347 UBL5Q9BZL1 73 aa14.67□□□□□ -0.06
RAB40B-201ENST00000269347 SS18L2Q9UHA2 77 aa14.66□□□□□ -0.06
RAB40B-201ENST00000269347 ATP5EP2Q5VTU8 51 aa14.66□□□□□ -0.06
RAB40B-201ENST00000269347 PANO1I0J062 215 aa14.65□□□□□ -0.06
RAB40B-201ENST00000269347 LINC01547P58512 204 aaPredicted RBP14.65□□□□□ -0.06
RAB40B-201ENST00000269347 Q6ZRX8 168 aa14.65□□□□□ -0.06
RAB40B-201ENST00000269347 A0A087WVE0 104 aa14.64□□□□□ -0.07
RAB40B-201ENST00000269347 PRYO14603 147 aa14.64□□□□□ -0.07
RAB40B-201ENST00000269347 ATOX1O00244 68 aa14.64□□□□□ -0.07
RAB40B-201ENST00000269347 ERC2-IT1O76042 136 aa14.64□□□□□ -0.07
RAB40B-201ENST00000269347 PDE6GP18545 87 aa14.64□□□□□ -0.07
RAB40B-201ENST00000269347 ST20-AS1Q8NBB2 130 aa14.62□□□□□ -0.07
RAB40B-201ENST00000269347 SRRM2Q9UQ35 2752 aaKnown RBP14.62□□□□□ -0.07
RAB40B-201ENST00000269347 Q8N377 158 aa14.61□□□□□ -0.07
RAB40B-201ENST00000269347 DEFB105AQ8NG35 78 aa14.61□□□□□ -0.07
RAB40B-201ENST00000269347 C3orf22Q8N5N4 141 aa14.61□□□□□ -0.07
RAB40B-201ENST00000269347 C9orf163Q8N9P6 203 aa14.6□□□□□ -0.07
RAB40B-201ENST00000269347 UQCRQO14949 82 aa14.59□□□□□ -0.07
RAB40B-201ENST00000269347 HYDINQ4G0P3 5121 aa14.59□□□□□ -0.07
RAB40B-201ENST00000269347 TRBV7-4A0A0J9YYF1 115 aa14.58□□□□□ -0.08
RAB40B-201ENST00000269347 ETDCA0A1B0GVM5 59 aa14.58□□□□□ -0.08
RAB40B-201ENST00000269347 C14orf177Q52M58 125 aa14.57□□□□□ -0.08
RAB40B-201ENST00000269347 PHF5AQ7RTV0 110 aaKnown RBP14.57□□□□□ -0.08
RAB40B-201ENST00000269347 COX7CP15954 63 aa14.56□□□□□ -0.08
RAB40B-201ENST00000269347 C9orf153Q5TBE3 101 aa14.56□□□□□ -0.08
RAB40B-201ENST00000269347 REG3GQ6UW15 175 aa14.56□□□□□ -0.08
RAB40B-201ENST00000269347 Q6ZR54 194 aa14.55□□□□□ -0.08
RAB40B-201ENST00000269347 DNAH8Q96JB1 4490 aa14.55□□□□□ -0.08
RAB40B-201ENST00000269347 FAM19A1Q7Z5A9 133 aa14.53□□□□□ -0.08
RAB40B-201ENST00000269347 DNAH6Q9C0G6 4158 aa14.52□□□□□ -0.08
RAB40B-201ENST00000269347 FRAS1Q86XX4 4008 aa14.52□□□□□ -0.08
RAB40B-201ENST00000269347 PRLHP81277 87 aa14.52□□□□□ -0.08
RAB40B-201ENST00000269347 Q6ZVQ6 151 aa14.52□□□□□ -0.08
RAB40B-201ENST00000269347 DHRS4-AS1Q9P1J3 65 aa14.51□□□□□ -0.09
RAB40B-201ENST00000269347 A0A087WTM6 91 aa14.51□□□□□ -0.09
RAB40B-201ENST00000269347 UBE2BP63146 152 aa14.49□□□□□ -0.09
RAB40B-201ENST00000269347 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.49□□□□□ -0.09
RAB40B-201ENST00000269347 DNAH11Q96DT5 4516 aa14.48□□□□□ -0.09
RAB40B-201ENST00000269347 HAMPP81172 84 aa14.48□□□□□ -0.09
RAB40B-201ENST00000269347 DNAH5Q8TE73 4624 aa14.48□□□□□ -0.09
RAB40B-201ENST00000269347 SERP2Q8N6R1 65 aa14.46□□□□□ -0.09
RAB40B-201ENST00000269347 IGLV5-48A0A075B6I7 105 aa14.45□□□□□ -0.1
RAB40B-201ENST00000269347 TNP2Q05952 138 aa14.43□□□□□ -0.1
RAB40B-201ENST00000269347 CRYGAP11844 174 aa14.42□□□□□ -0.1
RAB40B-201ENST00000269347 SMIM29Q86T20 159 aa14.41□□□□□ -0.1
RAB40B-201ENST00000269347 CXCL6P80162 114 aa14.41□□□□□ -0.1
RAB40B-201ENST00000269347 ALMS1Q8TCU4 4167 aa14.4□□□□□ -0.1
RAB40B-201ENST00000269347 LY6G6CO95867 125 aa14.4□□□□□ -0.1
RAB40B-201ENST00000269347 KRTAP21-3Q3LHN1 58 aa14.4□□□□□ -0.1
RAB40B-201ENST00000269347 A0A0G2JQZ4 141 aa14.39□□□□□ -0.11
RAB40B-201ENST00000269347 SPACA4Q8TDM5 124 aa14.39□□□□□ -0.11
RAB40B-201ENST00000269347 HIGD2AQ9BW72 106 aa14.37□□□□□ -0.11
RAB40B-201ENST00000269347 FAT2Q9NYQ8 4349 aa14.37□□□□□ -0.11
RAB40B-201ENST00000269347 RTL8CO15255 209 aa14.36□□□□□ -0.11
RAB40B-201ENST00000269347 A0A1W2PNM2 257 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms