RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 IGLV1-50A0A075B6I6 118 aa10.5□□□□□ -0.73
SHANK3-201ENST00000262795 MIR22HGQ0VDD5 57 aa10.5□□□□□ -0.73
SHANK3-201ENST00000262795 ZNF861PO60384 105 aa10.5□□□□□ -0.73
SHANK3-201ENST00000262795 Q6ZSA8 131 aa10.5□□□□□ -0.73
SHANK3-201ENST00000262795 C19orf73Q9NVV2 129 aa10.49□□□□□ -0.73
SHANK3-201ENST00000262795 KTN1-AS1Q86SY8 53 aa10.49□□□□□ -0.73
SHANK3-201ENST00000262795 SETD2Q9BYW2 2564 aaPredicted RBP10.47□□□□□ -0.73
SHANK3-201ENST00000262795 IGLV5-39A0A0G2JS06 123 aa10.47□□□□□ -0.73
SHANK3-201ENST00000262795 ZNF575Q86XF7 245 aa10.47□□□□□ -0.73
SHANK3-201ENST00000262795 USP9XQ93008 2570 aaPredicted RBP10.47□□□□□ -0.73
SHANK3-201ENST00000262795 LCA10Q71F78 164 aa10.47□□□□□ -0.73
SHANK3-201ENST00000262795 CSNK1G2-AS1Q8NCQ2 148 aa10.47□□□□□ -0.73
SHANK3-201ENST00000262795 IGLV7-43P04211 117 aa10.46□□□□□ -0.74
SHANK3-201ENST00000262795 PSORS1C2Q9UIG4 136 aa10.45□□□□□ -0.74
SHANK3-201ENST00000262795 ACANP16112 2415 aa10.44□□□□□ -0.74
SHANK3-201ENST00000262795 UQCR11O14957 56 aa10.44□□□□□ -0.74
SHANK3-201ENST00000262795 MTORP42345 2549 aa10.42□□□□□ -0.74
SHANK3-201ENST00000262795 MRPL34Q9BQ48 92 aaKnown RBP10.42□□□□□ -0.74
SHANK3-201ENST00000262795 IGLV7-46A0A075B6I9 117 aa10.41□□□□□ -0.74
SHANK3-201ENST00000262795 LUZP6Q538Z0 58 aa10.4□□□□□ -0.74
SHANK3-201ENST00000262795 ERC2-IT1O76042 136 aa10.38□□□□□ -0.75
SHANK3-201ENST00000262795 Q8N1X5 172 aa10.38□□□□□ -0.75
SHANK3-201ENST00000262795 PRR26Q8N8Z3 221 aa10.38□□□□□ -0.75
SHANK3-201ENST00000262795 LOC110117498A0A087WWA1 95 aa10.38□□□□□ -0.75
SHANK3-201ENST00000262795 PLA2G2DQ9UNK4 145 aa10.37□□□□□ -0.75
SHANK3-201ENST00000262795 A8MWP4 228 aa10.36□□□□□ -0.75
SHANK3-201ENST00000262795 TRBV7-4A0A0J9YYF1 115 aa10.35□□□□□ -0.75
SHANK3-201ENST00000262795 CYP4F30PQ9H0H9 118 aa10.35□□□□□ -0.75
SHANK3-201ENST00000262795 LOC101927531A0A1B0GV80 90 aa10.34□□□□□ -0.75
SHANK3-201ENST00000262795 IGFL1Q6UW32 110 aa10.34□□□□□ -0.75
SHANK3-201ENST00000262795 LITAFQ99732 161 aa10.34□□□□□ -0.75
SHANK3-201ENST00000262795 EIF4EBP3O60516 100 aaPredicted RBP10.32□□□□□ -0.76
SHANK3-201ENST00000262795 H3BPC8 53 aa10.32□□□□□ -0.76
SHANK3-201ENST00000262795 IGLV5-48A0A075B6I7 105 aa10.31□□□□□ -0.76
SHANK3-201ENST00000262795 KRTAP1-3Q8IUG1 177 aa10.3□□□□□ -0.76
SHANK3-201ENST00000262795 C9orf163Q8N9P6 203 aa10.29□□□□□ -0.76
SHANK3-201ENST00000262795 LINC00612Q8N6U2 182 aa10.29□□□□□ -0.76
SHANK3-201ENST00000262795 IGLV5-45A0A087WSX0 123 aa10.29□□□□□ -0.76
SHANK3-201ENST00000262795 CDC42SE1Q9NRR8 79 aa10.28□□□□□ -0.76
SHANK3-201ENST00000262795 PKD1L2Q7Z442 2459 aa10.28□□□□□ -0.76
SHANK3-201ENST00000262795 C8orf17Q9NRJ1 99 aa10.27□□□□□ -0.77
SHANK3-201ENST00000262795 PCNTO95613 3336 aa10.27□□□□□ -0.77
SHANK3-201ENST00000262795 A0A096LNT2 108 aa10.26□□□□□ -0.77
SHANK3-201ENST00000262795 Q5VSD8 79 aa10.24□□□□□ -0.77
SHANK3-201ENST00000262795 A0A1B0GVX0 72 aa10.24□□□□□ -0.77
SHANK3-201ENST00000262795 CEP295Q9C0D2 2601 aa10.23□□□□□ -0.77
SHANK3-201ENST00000262795 CAMK2N1Q7Z7J9 78 aa10.23□□□□□ -0.77
SHANK3-201ENST00000262795 KRTAP1-1Q07627 177 aa10.21□□□□□ -0.77
SHANK3-201ENST00000262795 A0A1B0GW54 56 aa10.2□□□□□ -0.78
SHANK3-201ENST00000262795 GIG44P09565 113 aaPredicted RBP10.2□□□□□ -0.78
SHANK3-201ENST00000262795 KCNQ1DNQ9H478 68 aa10.19□□□□□ -0.78
SHANK3-201ENST00000262795 H7BZZ5 65 aa10.19□□□□□ -0.78
SHANK3-201ENST00000262795 DNAH12Q6ZR08 3092 aa10.18□□□□□ -0.78
SHANK3-201ENST00000262795 SPRR4Q96PI1 79 aa10.18□□□□□ -0.78
SHANK3-201ENST00000262795 USP9YO00507 2555 aaPredicted RBP10.17□□□□□ -0.78
SHANK3-201ENST00000262795 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.16□□□□□ -0.78
SHANK3-201ENST00000262795 BPTFQ12830 3046 aa10.15□□□□□ -0.78
SHANK3-201ENST00000262795 PRR15Q8IV56 129 aa10.15□□□□□ -0.78
SHANK3-201ENST00000262795 Q8N377 158 aa10.14□□□□□ -0.79
SHANK3-201ENST00000262795 PRAC1Q96KF2 57 aa10.12□□□□□ -0.79
SHANK3-201ENST00000262795 C5orf42Q9H799 3197 aa10.12□□□□□ -0.79
SHANK3-201ENST00000262795 USP24Q9UPU5 2620 aa10.11□□□□□ -0.79
SHANK3-201ENST00000262795 PRR34Q9NV39 138 aa10.1□□□□□ -0.79
SHANK3-201ENST00000262795 HECTD1Q9ULT8 2610 aa10.1□□□□□ -0.79
SHANK3-201ENST00000262795 KLKP1Q107X0 134 aa10.07□□□□□ -0.8
SHANK3-201ENST00000262795 FAM229BQ4G0N7 80 aa10.05□□□□□ -0.8
SHANK3-201ENST00000262795 CNBPP62633 177 aaKnown RBP10.04□□□□□ -0.8
SHANK3-201ENST00000262795 A0A0A0MQY5 61 aa10.04□□□□□ -0.8
SHANK3-201ENST00000262795 Q1T7F1 81 aa10.03□□□□□ -0.8
SHANK3-201ENST00000262795 CEP350Q5VT06 3117 aa10.02□□□□□ -0.81
SHANK3-201ENST00000262795 TLX1NBP0CAT3 122 aa10□□□□□ -0.81
SHANK3-201ENST00000262795 FLNBO75369 2602 aaKnown RBP10□□□□□ -0.81
SHANK3-201ENST00000262795 FAM104AQ969W3 186 aa9.99□□□□□ -0.81
SHANK3-201ENST00000262795 LINC00483Q53H64 154 aa9.99□□□□□ -0.81
SHANK3-201ENST00000262795 MGAM2Q2M2H8 2515 aa9.99□□□□□ -0.81
SHANK3-201ENST00000262795 LCE6AA0A183 80 aa9.98□□□□□ -0.81
SHANK3-201ENST00000262795 CYSTM1Q9H1C7 97 aa9.97□□□□□ -0.81
SHANK3-201ENST00000262795 CSAG1Q6PB30 78 aa9.97□□□□□ -0.81
SHANK3-201ENST00000262795 S4R3F8 94 aa9.97□□□□□ -0.81
SHANK3-201ENST00000262795 EPG5Q9HCE0 2579 aa9.94□□□□□ -0.82
SHANK3-201ENST00000262795 Q5XG85 94 aa9.93□□□□□ -0.82
SHANK3-201ENST00000262795 CR1P17927 2039 aa9.93□□□□□ -0.82
SHANK3-201ENST00000262795 SEC61BP60468 96 aaKnown RBP9.93□□□□□ -0.82
SHANK3-201ENST00000262795 KRTAP10-2P60368 255 aa9.88□□□□□ -0.83
SHANK3-201ENST00000262795 KRTAP10-1P60331 282 aa9.86□□□□□ -0.83
SHANK3-201ENST00000262795 SPINK7P58062 85 aa9.85□□□□□ -0.83
SHANK3-201ENST00000262795 HRES1P13985 223 aa9.84□□□□□ -0.83
SHANK3-201ENST00000262795 A0A1W2PNM2 257 aa9.8□□□□□ -0.84
SHANK3-201ENST00000262795 SPANXA2-OT1Q8N9U9 137 aa9.79□□□□□ -0.84
SHANK3-201ENST00000262795 R4GN34 69 aa9.79□□□□□ -0.84
SHANK3-201ENST00000262795 A0A1B0GU33 70 aa9.77□□□□□ -0.84
SHANK3-201ENST00000262795 PLAC4Q8WY50 150 aa9.77□□□□□ -0.85
SHANK3-201ENST00000262795 KLK9Q2XQG4 91 aa9.76□□□□□ -0.85
SHANK3-201ENST00000262795 FP248Q71RG6 208 aaPredicted RBP9.75□□□□□ -0.85
SHANK3-201ENST00000262795 PLAC8Q9NZF1 115 aa9.75□□□□□ -0.85
SHANK3-201ENST00000262795 OCR1Q9BZK8 76 aa9.75□□□□□ -0.85
SHANK3-201ENST00000262795 ZCCHC13Q8WW36 166 aaKnown RBP9.72□□□□□ -0.85
SHANK3-201ENST00000262795 Q75L30 129 aa9.71□□□□□ -0.85
SHANK3-201ENST00000262795 OXTP01178 125 aa9.71□□□□□ -0.85
SHANK3-201ENST00000262795 PRRC2CQ9Y520 2896 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms