RNA–Protein interactions for RNA: ENST00000261438.9

KLF3-201, Transcript of Kruppel like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLF3, Length 5,122 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF3-201ENST00000261438 IGKV2D-30A0A075B6S6 120 aa11.46□□□□□ -0.58
KLF3-201ENST00000261438 IGKV2-30P06310 120 aa11.46□□□□□ -0.58
KLF3-201ENST00000261438 RANBP2P49792 3224 aaKnown RBP11.46□□□□□ -0.58
KLF3-201ENST00000261438 A0A1W2PNM2 257 aa11.45□□□□□ -0.58
KLF3-201ENST00000261438 SPANXA2-OT1Q8N9U9 137 aa11.43□□□□□ -0.58
KLF3-201ENST00000261438 ANKRD17O75179 2603 aaKnown RBP11.43□□□□□ -0.58
KLF3-201ENST00000261438 F8P00451 2351 aa11.42□□□□□ -0.58
KLF3-201ENST00000261438 PHF5AQ7RTV0 110 aaKnown RBP11.41□□□□□ -0.58
KLF3-201ENST00000261438 A0A0G2JQZ4 141 aa11.4□□□□□ -0.58
KLF3-201ENST00000261438 A0A1W2PNN7 141 aa11.4□□□□□ -0.58
KLF3-201ENST00000261438 CDC42SE1Q9NRR8 79 aa11.4□□□□□ -0.58
KLF3-201ENST00000261438 BRCA2P51587 3418 aa11.4□□□□□ -0.58
KLF3-201ENST00000261438 MKI67P46013 3256 aaKnown RBP11.4□□□□□ -0.59
KLF3-201ENST00000261438 HTTP42858 3142 aa11.39□□□□□ -0.59
KLF3-201ENST00000261438 IGLV8-61A0A075B6I0 122 aa11.38□□□□□ -0.59
KLF3-201ENST00000261438 C15orf56Q8N910 161 aa11.38□□□□□ -0.59
KLF3-201ENST00000261438 LINC00612Q8N6U2 182 aa11.37□□□□□ -0.59
KLF3-201ENST00000261438 IGLV5-48A0A075B6I7 105 aa11.37□□□□□ -0.59
KLF3-201ENST00000261438 MRPL34Q9BQ48 92 aaKnown RBP11.37□□□□□ -0.59
KLF3-201ENST00000261438 C16orf90A8MZG2 172 aa11.37□□□□□ -0.59
KLF3-201ENST00000261438 UQCR11O14957 56 aa11.36□□□□□ -0.59
KLF3-201ENST00000261438 MDFIQ99750 246 aa11.36□□□□□ -0.59
KLF3-201ENST00000261438 LAMA3Q16787 3333 aa11.35□□□□□ -0.59
KLF3-201ENST00000261438 C19orf73Q9NVV2 129 aa11.35□□□□□ -0.59
KLF3-201ENST00000261438 RBM12B-AS1Q9P1G2 102 aa11.35□□□□□ -0.59
KLF3-201ENST00000261438 C8orf17Q9NRJ1 99 aa11.31□□□□□ -0.6
KLF3-201ENST00000261438 MIR22HGQ0VDD5 57 aa11.3□□□□□ -0.6
KLF3-201ENST00000261438 DSCR10P59022 87 aa11.29□□□□□ -0.6
KLF3-201ENST00000261438 DNAH10OSP0CZ25 163 aa11.28□□□□□ -0.6
KLF3-201ENST00000261438 IGLV5-52A0A0A0MRZ9 124 aa11.28□□□□□ -0.6
KLF3-201ENST00000261438 LINC00588Q9Y4M8 146 aa11.27□□□□□ -0.6
KLF3-201ENST00000261438 UNC80Q8N2C7 3258 aa11.27□□□□□ -0.61
KLF3-201ENST00000261438 CHD9Q3L8U1 2897 aa11.27□□□□□ -0.61
KLF3-201ENST00000261438 PLA2G2DQ9UNK4 145 aa11.26□□□□□ -0.61
KLF3-201ENST00000261438 CHTF8P0CG12 524 aa11.26□□□□□ -0.61
KLF3-201ENST00000261438 LINC00313P59037 77 aa11.26□□□□□ -0.61
KLF3-201ENST00000261438 FASNP49327 2511 aaKnown RBP11.25□□□□□ -0.61
KLF3-201ENST00000261438 TLX1NBP0CAT3 122 aa11.23□□□□□ -0.61
KLF3-201ENST00000261438 FAM229AH3BQW9 127 aa11.23□□□□□ -0.61
KLF3-201ENST00000261438 NUPR2A6NF83 97 aa11.23□□□□□ -0.61
KLF3-201ENST00000261438 Q75L30 129 aa11.23□□□□□ -0.61
KLF3-201ENST00000261438 EPG5Q9HCE0 2579 aa11.22□□□□□ -0.61
KLF3-201ENST00000261438 Q8N9P0 234 aaPredicted RBP11.22□□□□□ -0.61
KLF3-201ENST00000261438 Q8NDZ9 215 aa11.22□□□□□ -0.61
KLF3-201ENST00000261438 A0A1B0GVX0 72 aa11.21□□□□□ -0.61
KLF3-201ENST00000261438 SPRR4Q96PI1 79 aa11.21□□□□□ -0.61
KLF3-201ENST00000261438 USP24Q9UPU5 2620 aa11.17□□□□□ -0.62
KLF3-201ENST00000261438 Q5VV11 94 aa11.17□□□□□ -0.62
KLF3-201ENST00000261438 SPACA4Q8TDM5 124 aa11.17□□□□□ -0.62
KLF3-201ENST00000261438 LY6G6CO95867 125 aa11.17□□□□□ -0.62
KLF3-201ENST00000261438 IGLV7-46A0A075B6I9 117 aa11.15□□□□□ -0.62
KLF3-201ENST00000261438 SPINT4Q6UDR6 99 aa11.15□□□□□ -0.63
KLF3-201ENST00000261438 XIRP2A4UGR9 3374 aa11.14□□□□□ -0.63
KLF3-201ENST00000261438 PRR26Q8N8Z3 221 aa11.13□□□□□ -0.63
KLF3-201ENST00000261438 CR1P17927 2039 aa11.13□□□□□ -0.63
KLF3-201ENST00000261438 CENPEQ02224 2701 aa11.12□□□□□ -0.63
KLF3-201ENST00000261438 SSBP3-AS1Q7Z2R9 100 aa11.12□□□□□ -0.63
KLF3-201ENST00000261438 TRIOO75962 3097 aa11.1□□□□□ -0.63
KLF3-201ENST00000261438 PRUNE2Q8WUY3 3088 aa11.08□□□□□ -0.63
KLF3-201ENST00000261438 FREM2Q5SZK8 3169 aa11.08□□□□□ -0.64
KLF3-201ENST00000261438 IGLV5-37A0A075B6J1 123 aa11.08□□□□□ -0.64
KLF3-201ENST00000261438 LINC01558Q9Y6Z2 57 aa11.08□□□□□ -0.64
KLF3-201ENST00000261438 WDFY4Q6ZS81 3184 aa11.07□□□□□ -0.64
KLF3-201ENST00000261438 C1orf134Q5TEV5 83 aa11.06□□□□□ -0.64
KLF3-201ENST00000261438 LINC01554Q52M75 96 aa11.04□□□□□ -0.64
KLF3-201ENST00000261438 CASC10Q5T4H9 136 aa11.03□□□□□ -0.64
KLF3-201ENST00000261438 CNBPP62633 177 aaKnown RBP11.03□□□□□ -0.64
KLF3-201ENST00000261438 MGAQ8IWI9 3026 aa11.02□□□□□ -0.64
KLF3-201ENST00000261438 VPS13AQ96RL7 3174 aa11.02□□□□□ -0.65
KLF3-201ENST00000261438 C9orf163Q8N9P6 203 aa11.02□□□□□ -0.65
KLF3-201ENST00000261438 PRAC1Q96KF2 57 aa11.02□□□□□ -0.65
KLF3-201ENST00000261438 TRANK1O15050 2925 aa11□□□□□ -0.65
KLF3-201ENST00000261438 Q96NJ1 140 aa11□□□□□ -0.65
KLF3-201ENST00000261438 NBDYA0A0U1RRE5 68 aa11□□□□□ -0.65
KLF3-201ENST00000261438 H3BS24 57 aa10.99□□□□□ -0.65
KLF3-201ENST00000261438 RTL8CO15255 209 aa10.98□□□□□ -0.65
KLF3-201ENST00000261438 MAP1AP78559 2803 aaPredicted RBP10.97□□□□□ -0.65
KLF3-201ENST00000261438 AKAP13Q12802 2813 aa10.96□□□□□ -0.65
KLF3-201ENST00000261438 KRTAP10-3P60369 221 aa10.96□□□□□ -0.66
KLF3-201ENST00000261438 SPINK7P58062 85 aa10.94□□□□□ -0.66
KLF3-201ENST00000261438 MGAM2Q2M2H8 2515 aa10.93□□□□□ -0.66
KLF3-201ENST00000261438 CELSR3Q9NYQ7 3312 aa10.93□□□□□ -0.66
KLF3-201ENST00000261438 ANAPC11Q9NYG5 84 aa10.93□□□□□ -0.66
KLF3-201ENST00000261438 MMP24-AS1A0A0U1RRL7 71 aa10.92□□□□□ -0.66
KLF3-201ENST00000261438 CDH23Q9H251 3354 aa10.92□□□□□ -0.66
KLF3-201ENST00000261438 ZNF861PO60384 105 aa10.91□□□□□ -0.66
KLF3-201ENST00000261438 NBEAQ8NFP9 2946 aa10.91□□□□□ -0.66
KLF3-201ENST00000261438 FLNBO75369 2602 aaKnown RBP10.91□□□□□ -0.66
KLF3-201ENST00000261438 HRES1P13985 223 aa10.9□□□□□ -0.66
KLF3-201ENST00000261438 SPRR1AP35321 89 aa10.9□□□□□ -0.66
KLF3-201ENST00000261438 HECTD1Q9ULT8 2610 aa10.89□□□□□ -0.67
KLF3-201ENST00000261438 FRYQ5TBA9 3013 aa10.88□□□□□ -0.67
KLF3-201ENST00000261438 TYMSOSQ8TAI1 123 aa10.87□□□□□ -0.67
KLF3-201ENST00000261438 KRTAP10-11P60412 298 aa10.86□□□□□ -0.67
KLF3-201ENST00000261438 ATRQ13535 2644 aa10.86□□□□□ -0.67
KLF3-201ENST00000261438 DSPP15924 2871 aaKnown RBP10.86□□□□□ -0.67
KLF3-201ENST00000261438 FLNAP21333 2647 aaKnown RBP10.85□□□□□ -0.67
KLF3-201ENST00000261438 DNAH14Q0VDD8 3507 aa10.85□□□□□ -0.67
KLF3-201ENST00000261438 CHD6Q8TD26 2715 aa10.84□□□□□ -0.67
KLF3-201ENST00000261438 ZCCHC13Q8WW36 166 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms