RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 DYNC2H1Q8NCM8 4307 aaKnown RBP12.75□□□□□ -0.37
COL4A3BP-201ENST00000261415 TMEM254Q8TBM7 123 aa12.74□□□□□ -0.37
COL4A3BP-201ENST00000261415 FAM229BQ4G0N7 80 aa12.73□□□□□ -0.37
COL4A3BP-201ENST00000261415 Q6ZVQ6 151 aa12.73□□□□□ -0.37
COL4A3BP-201ENST00000261415 Q8N3U1 123 aa12.73□□□□□ -0.37
COL4A3BP-201ENST00000261415 PDE6GP18545 87 aa12.72□□□□□ -0.37
COL4A3BP-201ENST00000261415 TOMM7Q9P0U1 55 aa12.71□□□□□ -0.37
COL4A3BP-201ENST00000261415 NREPQ16612 68 aa12.7□□□□□ -0.38
COL4A3BP-201ENST00000261415 IGLV4-60A0A075B6I1 120 aa12.69□□□□□ -0.38
COL4A3BP-201ENST00000261415 NUPR2A6NF83 97 aa12.69□□□□□ -0.38
COL4A3BP-201ENST00000261415 CD164Q04900 197 aa12.69□□□□□ -0.38
COL4A3BP-201ENST00000261415 A0A1B0GUV1 79 aa12.68□□□□□ -0.38
COL4A3BP-201ENST00000261415 ZNF561-AS1K7EIQ3 104 aa12.68□□□□□ -0.38
COL4A3BP-201ENST00000261415 STARD9Q9P2P6 4700 aa12.68□□□□□ -0.38
COL4A3BP-201ENST00000261415 FUSP35637 526 aaKnown RBP eCLIP12.67□□□□□ -0.38
COL4A3BP-201ENST00000261415 WFDC10BQ8IUB3 73 aa12.67□□□□□ -0.38
COL4A3BP-201ENST00000261415 APLNQ9ULZ1 77 aa12.66□□□□□ -0.38
COL4A3BP-201ENST00000261415 C6orf223Q8N319 242 aa12.65□□□□□ -0.38
COL4A3BP-201ENST00000261415 PLECQ15149 4684 aaKnown RBP12.65□□□□□ -0.38
COL4A3BP-201ENST00000261415 PRYO14603 147 aa12.65□□□□□ -0.38
COL4A3BP-201ENST00000261415 TENM2Q9NT68 2774 aa12.65□□□□□ -0.38
COL4A3BP-201ENST00000261415 LINC00588Q9Y4M8 146 aa12.64□□□□□ -0.39
COL4A3BP-201ENST00000261415 LYSTQ99698 3801 aa12.64□□□□□ -0.39
COL4A3BP-201ENST00000261415 H3BQ85 93 aa12.63□□□□□ -0.39
COL4A3BP-201ENST00000261415 BPY2O14599 106 aa12.63□□□□□ -0.39
COL4A3BP-201ENST00000261415 ANGP03950 147 aaKnown RBP12.61□□□□□ -0.39
COL4A3BP-201ENST00000261415 Q1T7F1 81 aa12.6□□□□□ -0.39
COL4A3BP-201ENST00000261415 IGKV3OR2-268A0A0C4DH90 116 aa12.6□□□□□ -0.39
COL4A3BP-201ENST00000261415 CLPSL2Q6UWE3 100 aa12.59□□□□□ -0.39
COL4A3BP-201ENST00000261415 LINC00269Q8N2A0 174 aa12.59□□□□□ -0.39
COL4A3BP-201ENST00000261415 MUC7Q8TAX7 377 aa12.59□□□□□ -0.39
COL4A3BP-201ENST00000261415 WWC2-AS2Q96NR7 200 aa12.59□□□□□ -0.39
COL4A3BP-201ENST00000261415 A0A087WZ39 114 aa12.58□□□□□ -0.4
COL4A3BP-201ENST00000261415 IGHV3OR16-9A0A0B4J2B5 98 aa12.58□□□□□ -0.4
COL4A3BP-201ENST00000261415 LINC01556Q5JQF7 62 aa12.58□□□□□ -0.4
COL4A3BP-201ENST00000261415 LINC00575Q6W349 94 aa12.58□□□□□ -0.4
COL4A3BP-201ENST00000261415 KLK12Q9UKR0 248 aa12.57□□□□□ -0.4
COL4A3BP-201ENST00000261415 DNAH10OSP0CZ25 163 aa12.57□□□□□ -0.4
COL4A3BP-201ENST00000261415 REG3AQ06141 175 aa12.57□□□□□ -0.4
COL4A3BP-201ENST00000261415 LINC00959A0A1B0GUT2 108 aa12.56□□□□□ -0.4
COL4A3BP-201ENST00000261415 M0R2N4 97 aa12.55□□□□□ -0.4
COL4A3BP-201ENST00000261415 PRR34Q9NV39 138 aa12.55□□□□□ -0.4
COL4A3BP-201ENST00000261415 UBE2DNLQ8IWF7 75 aa12.54□□□□□ -0.4
COL4A3BP-201ENST00000261415 hDV103S1A0JD37 113 aa12.53□□□□□ -0.4
COL4A3BP-201ENST00000261415 C6orf99Q4VX62 202 aa12.53□□□□□ -0.4
COL4A3BP-201ENST00000261415 DNAH1Q9P2D7 4330 aa12.52□□□□□ -0.41
COL4A3BP-201ENST00000261415 OCR1Q9BZK8 76 aa12.51□□□□□ -0.41
COL4A3BP-201ENST00000261415 IGLV10-54A0A075B6I4 117 aa12.5□□□□□ -0.41
COL4A3BP-201ENST00000261415 VPS13DQ5THJ4 4388 aa12.48□□□□□ -0.41
COL4A3BP-201ENST00000261415 CHCHD10Q8WYQ3 142 aaPredicted RBP12.48□□□□□ -0.41
COL4A3BP-201ENST00000261415 Q6ZRP5 223 aa12.48□□□□□ -0.41
COL4A3BP-201ENST00000261415 SCXQ7RTU7 201 aa12.48□□□□□ -0.41
COL4A3BP-201ENST00000261415 MRPL55Q7Z7F7 128 aaKnown RBP12.48□□□□□ -0.41
COL4A3BP-201ENST00000261415 COX17Q14061 63 aa12.46□□□□□ -0.41
COL4A3BP-201ENST00000261415 Q8IZM0 81 aa12.46□□□□□ -0.41
COL4A3BP-201ENST00000261415 PRR3P79522 188 aaKnown RBP12.46□□□□□ -0.42
COL4A3BP-201ENST00000261415 CASC10Q5T4H9 136 aa12.45□□□□□ -0.42
COL4A3BP-201ENST00000261415 CD164L2Q6UWJ8 174 aa12.45□□□□□ -0.42
COL4A3BP-201ENST00000261415 HIGD2AQ9BW72 106 aa12.44□□□□□ -0.42
COL4A3BP-201ENST00000261415 C3orf84H3BNL1 204 aa12.42□□□□□ -0.42
COL4A3BP-201ENST00000261415 KRTAP1-5Q9BYS1 174 aa12.41□□□□□ -0.42
COL4A3BP-201ENST00000261415 IGKV4-1P06312 121 aa12.4□□□□□ -0.42
COL4A3BP-201ENST00000261415 Q6ZQY7 126 aa12.4□□□□□ -0.42
COL4A3BP-201ENST00000261415 KRTAP26-1Q6PEX3 210 aa12.4□□□□□ -0.42
COL4A3BP-201ENST00000261415 C1orf64Q8NEQ6 169 aa12.39□□□□□ -0.43
COL4A3BP-201ENST00000261415 IGKV2D-24A0A075B6R9 120 aa12.39□□□□□ -0.43
COL4A3BP-201ENST00000261415 TRAV22A0A0B4J277 110 aa12.38□□□□□ -0.43
COL4A3BP-201ENST00000261415 COX7BP24311 80 aa12.37□□□□□ -0.43
COL4A3BP-201ENST00000261415 PSPHP1O15172 72 aa12.36□□□□□ -0.43
COL4A3BP-201ENST00000261415 NBDYA0A0U1RRE5 68 aa12.36□□□□□ -0.43
COL4A3BP-201ENST00000261415 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.36□□□□□ -0.43
COL4A3BP-201ENST00000261415 UBE2BP63146 152 aa12.35□□□□□ -0.43
COL4A3BP-201ENST00000261415 KTN1-AS1Q86SY8 53 aa12.35□□□□□ -0.43
COL4A3BP-201ENST00000261415 LCE6AA0A183 80 aa12.34□□□□□ -0.43
COL4A3BP-201ENST00000261415 LRCOL1A6NCL2 159 aa12.34□□□□□ -0.43
COL4A3BP-201ENST00000261415 DNAH10Q8IVF4 4471 aa12.33□□□□□ -0.44
COL4A3BP-201ENST00000261415 ALMS1Q8TCU4 4167 aa12.33□□□□□ -0.44
COL4A3BP-201ENST00000261415 LINC00476Q8WZB0 136 aa12.32□□□□□ -0.44
COL4A3BP-201ENST00000261415 KMT2AQ03164 3969 aa12.32□□□□□ -0.44
COL4A3BP-201ENST00000261415 LY6G6CO95867 125 aa12.32□□□□□ -0.44
COL4A3BP-201ENST00000261415 CYP4F30PQ9H0H9 118 aa12.31□□□□□ -0.44
COL4A3BP-201ENST00000261415 Q8N9L7 120 aa12.3□□□□□ -0.44
COL4A3BP-201ENST00000261415 SYCNQ0VAF6 134 aa12.3□□□□□ -0.44
COL4A3BP-201ENST00000261415 IGLV6-57P01721 117 aa12.29□□□□□ -0.44
COL4A3BP-201ENST00000261415 KIAA0087Q14695 138 aa12.28□□□□□ -0.44
COL4A3BP-201ENST00000261415 RBM12B-AS1Q9P1G2 102 aa12.28□□□□□ -0.44
COL4A3BP-201ENST00000261415 DNAH6Q9C0G6 4158 aa12.28□□□□□ -0.44
COL4A3BP-201ENST00000261415 C15orf56Q8N910 161 aa12.27□□□□□ -0.44
COL4A3BP-201ENST00000261415 SPAG11BQ08648 103 aa12.27□□□□□ -0.45
COL4A3BP-201ENST00000261415 PSCAO43653 123 aa12.26□□□□□ -0.45
COL4A3BP-201ENST00000261415 UBE2AP49459 152 aa12.25□□□□□ -0.45
COL4A3BP-201ENST00000261415 Q6ZR54 194 aa12.25□□□□□ -0.45
COL4A3BP-201ENST00000261415 ZCCHC13Q8WW36 166 aaKnown RBP12.25□□□□□ -0.45
COL4A3BP-201ENST00000261415 DIRC1Q969H9 104 aa12.25□□□□□ -0.45
COL4A3BP-201ENST00000261415 NDUFS5O43920 106 aa12.25□□□□□ -0.45
COL4A3BP-201ENST00000261415 Q8NDZ9 215 aa12.25□□□□□ -0.45
COL4A3BP-201ENST00000261415 HIGD2BQ4VC39 106 aa12.24□□□□□ -0.45
COL4A3BP-201ENST00000261415 A8MUN3 132 aa12.23□□□□□ -0.45
COL4A3BP-201ENST00000261415 FAM30AQ9NZY2 134 aa12.23□□□□□ -0.45
COL4A3BP-201ENST00000261415 GVQW2A0A096LPI5 108 aaPredicted RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms