RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 CNBPP62633 177 aaKnown RBP4.33□□□□□ -1.72
PDGFRA-201ENST00000257290 Q8N377 158 aa4.33□□□□□ -1.72
PDGFRA-201ENST00000257290 LCE6AA0A183 80 aa4.33□□□□□ -1.72
PDGFRA-201ENST00000257290 IGLV5-37A0A075B6J1 123 aa4.33□□□□□ -1.72
PDGFRA-201ENST00000257290 ZNF462Q96JM2 2506 aa4.33□□□□□ -1.72
PDGFRA-201ENST00000257290 GVQW2A0A096LPI5 108 aaPredicted RBP4.33□□□□□ -1.72
PDGFRA-201ENST00000257290 LINC00483Q53H64 154 aa4.31□□□□□ -1.72
PDGFRA-201ENST00000257290 IGFL1Q6UW32 110 aa4.31□□□□□ -1.72
PDGFRA-201ENST00000257290 HTTP42858 3142 aa4.31□□□□□ -1.72
PDGFRA-201ENST00000257290 SPRR4Q96PI1 79 aa4.3□□□□□ -1.72
PDGFRA-201ENST00000257290 DNAH12Q6ZR08 3092 aa4.3□□□□□ -1.72
PDGFRA-201ENST00000257290 IGF2RP11717 2491 aa4.3□□□□□ -1.72
PDGFRA-201ENST00000257290 RTL8CO15255 209 aa4.3□□□□□ -1.72
PDGFRA-201ENST00000257290 APLNQ9ULZ1 77 aa4.3□□□□□ -1.72
PDGFRA-201ENST00000257290 NBASA2RRP1 2371 aa4.29□□□□□ -1.72
PDGFRA-201ENST00000257290 CHD9Q3L8U1 2897 aa4.29□□□□□ -1.72
PDGFRA-201ENST00000257290 A0A1B0GU33 70 aa4.29□□□□□ -1.72
PDGFRA-201ENST00000257290 LINC00612Q8N6U2 182 aa4.29□□□□□ -1.72
PDGFRA-201ENST00000257290 NCOR2Q9Y618 2525 aa4.28□□□□□ -1.72
PDGFRA-201ENST00000257290 CASC10Q5T4H9 136 aa4.28□□□□□ -1.72
PDGFRA-201ENST00000257290 ZNF575Q86XF7 245 aa4.28□□□□□ -1.72
PDGFRA-201ENST00000257290 KRTAP1-3Q8IUG1 177 aa4.28□□□□□ -1.72
PDGFRA-201ENST00000257290 PLA2G2DQ9UNK4 145 aa4.27□□□□□ -1.73
PDGFRA-201ENST00000257290 A0A1B0GVX0 72 aa4.27□□□□□ -1.73
PDGFRA-201ENST00000257290 CSNK1G2-AS1Q8NCQ2 148 aa4.27□□□□□ -1.73
PDGFRA-201ENST00000257290 CIRBP-AS1Q8TBR5 109 aa4.27□□□□□ -1.73
PDGFRA-201ENST00000257290 FAM208BQ5VWN6 2430 aa4.27□□□□□ -1.73
PDGFRA-201ENST00000257290 BPTFQ12830 3046 aa4.27□□□□□ -1.73
PDGFRA-201ENST00000257290 HIVEP2P31629 2446 aa4.26□□□□□ -1.73
PDGFRA-201ENST00000257290 KRTAP24-1Q3LI83 254 aa4.26□□□□□ -1.73
PDGFRA-201ENST00000257290 BDP1A6H8Y1 2624 aa4.26□□□□□ -1.73
PDGFRA-201ENST00000257290 A8MUU9 505 aa4.26□□□□□ -1.73
PDGFRA-201ENST00000257290 LY6G6CO95867 125 aa4.26□□□□□ -1.73
PDGFRA-201ENST00000257290 CHD7Q9P2D1 2997 aa4.25□□□□□ -1.73
PDGFRA-201ENST00000257290 H3BNG1 76 aa4.24□□□□□ -1.73
PDGFRA-201ENST00000257290 PIEZO1Q92508 2521 aa4.23□□□□□ -1.73
PDGFRA-201ENST00000257290 ZNF861PO60384 105 aa4.23□□□□□ -1.73
PDGFRA-201ENST00000257290 KRTAP1-1Q07627 177 aa4.23□□□□□ -1.73
PDGFRA-201ENST00000257290 TRANK1O15050 2925 aa4.22□□□□□ -1.73
PDGFRA-201ENST00000257290 C15orf56Q8N910 161 aa4.22□□□□□ -1.73
PDGFRA-201ENST00000257290 PIEZO2Q9H5I5 2752 aa4.22□□□□□ -1.73
PDGFRA-201ENST00000257290 ACACBO00763 2458 aa4.21□□□□□ -1.74
PDGFRA-201ENST00000257290 TLN1Q9Y490 2541 aaKnown RBP4.21□□□□□ -1.74
PDGFRA-201ENST00000257290 NAV2Q8IVL1 2488 aa4.21□□□□□ -1.74
PDGFRA-201ENST00000257290 IGLV5-52A0A0A0MRZ9 124 aa4.2□□□□□ -1.74
PDGFRA-201ENST00000257290 KRTAP10-3P60369 221 aa4.2□□□□□ -1.74
PDGFRA-201ENST00000257290 MMP24-AS1A0A0U1RRL7 71 aa4.2□□□□□ -1.74
PDGFRA-201ENST00000257290 Q8NDZ9 215 aa4.19□□□□□ -1.74
PDGFRA-201ENST00000257290 LINC01556Q5JQF7 62 aa4.19□□□□□ -1.74
PDGFRA-201ENST00000257290 A0A0D9SG42 100 aa4.17□□□□□ -1.74
PDGFRA-201ENST00000257290 A0A0G2JQZ4 141 aa4.16□□□□□ -1.74
PDGFRA-201ENST00000257290 A0A1W2PNN7 141 aa4.16□□□□□ -1.74
PDGFRA-201ENST00000257290 CENPFP49454 3210 aa4.16□□□□□ -1.74
PDGFRA-201ENST00000257290 CEP295Q9C0D2 2601 aa4.16□□□□□ -1.74
PDGFRA-201ENST00000257290 PCNTO95613 3336 aa4.15□□□□□ -1.74
PDGFRA-201ENST00000257290 KRTAP29-1A8MX34 341 aaPredicted RBP4.15□□□□□ -1.74
PDGFRA-201ENST00000257290 CSPG4Q6UVK1 2322 aa4.15□□□□□ -1.74
PDGFRA-201ENST00000257290 ANKRD11Q6UB99 2663 aaPredicted RBP4.15□□□□□ -1.74
PDGFRA-201ENST00000257290 CR1P17927 2039 aa4.15□□□□□ -1.75
PDGFRA-201ENST00000257290 KRTAP10-11P60412 298 aa4.15□□□□□ -1.75
PDGFRA-201ENST00000257290 Q5W150 140 aa4.15□□□□□ -1.75
PDGFRA-201ENST00000257290 GIG44P09565 113 aaPredicted RBP4.15□□□□□ -1.75
PDGFRA-201ENST00000257290 HIVEP3Q5T1R4 2406 aa4.14□□□□□ -1.75
PDGFRA-201ENST00000257290 RPL37P61927 97 aaKnown RBP4.14□□□□□ -1.75
PDGFRA-201ENST00000257290 CACNA1AO00555 2505 aa4.14□□□□□ -1.75
PDGFRA-201ENST00000257290 SPG11Q96JI7 2443 aa4.14□□□□□ -1.75
PDGFRA-201ENST00000257290 CEP350Q5VT06 3117 aa4.14□□□□□ -1.75
PDGFRA-201ENST00000257290 DOPEY1Q5JWR5 2465 aa4.13□□□□□ -1.75
PDGFRA-201ENST00000257290 PLAC8Q9NZF1 115 aa4.13□□□□□ -1.75
PDGFRA-201ENST00000257290 PSORS1C2Q9UIG4 136 aa4.13□□□□□ -1.75
PDGFRA-201ENST00000257290 WDR87Q6ZQQ6 2873 aa4.13□□□□□ -1.75
PDGFRA-201ENST00000257290 LINC00304Q8N9R0 145 aa4.13□□□□□ -1.75
PDGFRA-201ENST00000257290 KRTAP11-1Q8IUC1 163 aa4.12□□□□□ -1.75
PDGFRA-201ENST00000257290 PKD1L2Q7Z442 2459 aa4.11□□□□□ -1.75
PDGFRA-201ENST00000257290 FAM168BA1KXE4 195 aa4.11□□□□□ -1.75
PDGFRA-201ENST00000257290 H1FX-AS1Q4G0G2 97 aa4.11□□□□□ -1.75
PDGFRA-201ENST00000257290 K7EIL1 84 aa4.1□□□□□ -1.75
PDGFRA-201ENST00000257290 PANO1I0J062 215 aa4.09□□□□□ -1.75
PDGFRA-201ENST00000257290 Q8N1X5 172 aa4.09□□□□□ -1.75
PDGFRA-201ENST00000257290 LINC00472Q9H8W2 130 aa4.09□□□□□ -1.75
PDGFRA-201ENST00000257290 SONP18583 2426 aaKnown RBP4.08□□□□□ -1.76
PDGFRA-201ENST00000257290 NBDYA0A0U1RRE5 68 aa4.08□□□□□ -1.76
PDGFRA-201ENST00000257290 C5orf42Q9H799 3197 aa4.08□□□□□ -1.76
PDGFRA-201ENST00000257290 PTPN13Q12923 2485 aa4.07□□□□□ -1.76
PDGFRA-201ENST00000257290 PRR34Q9NV39 138 aa4.07□□□□□ -1.76
PDGFRA-201ENST00000257290 Q96NJ1 140 aa4.06□□□□□ -1.76
PDGFRA-201ENST00000257290 KRTAP4-16G5E9R7 235 aaPredicted RBP4.06□□□□□ -1.76
PDGFRA-201ENST00000257290 SPTBN4Q9H254 2564 aa4.05□□□□□ -1.76
PDGFRA-201ENST00000257290 CHD8Q9HCK8 2581 aa4.04□□□□□ -1.76
PDGFRA-201ENST00000257290 WWC2-AS2Q96NR7 200 aa4.04□□□□□ -1.76
PDGFRA-201ENST00000257290 KRTAP26-1Q6PEX3 210 aa4.04□□□□□ -1.76
PDGFRA-201ENST00000257290 CCDC168Q8NDH2 2452 aa4.03□□□□□ -1.76
PDGFRA-201ENST00000257290 ANKRD17O75179 2603 aaKnown RBP4.02□□□□□ -1.77
PDGFRA-201ENST00000257290 COX6B2Q6YFQ2 88 aa4.02□□□□□ -1.77
PDGFRA-201ENST00000257290 PLAC4Q8WY50 150 aa4.02□□□□□ -1.77
PDGFRA-201ENST00000257290 BRCA2P51587 3418 aa4.02□□□□□ -1.77
PDGFRA-201ENST00000257290 MYO18BQ8IUG5 2567 aa4.01□□□□□ -1.77
PDGFRA-201ENST00000257290 SPACA4Q8TDM5 124 aa4.01□□□□□ -1.77
PDGFRA-201ENST00000257290 NOTCH2Q04721 2471 aa4.01□□□□□ -1.77
PDGFRA-201ENST00000257290 P0C880 135 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms