RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 SYCNQ0VAF6 134 aa8.95□□□□□ -0.98
VHL-201ENST00000256474 M0R378 163 aa8.94□□□□□ -0.98
VHL-201ENST00000256474 NDUFC2-KCTD14E9PQ53 114 aa8.94□□□□□ -0.98
VHL-201ENST00000256474 ATP5EP2Q5VTU8 51 aa8.94□□□□□ -0.98
VHL-201ENST00000256474 C15orf56Q8N910 161 aa8.94□□□□□ -0.98
VHL-201ENST00000256474 FAM168BA1KXE4 195 aa8.93□□□□□ -0.98
VHL-201ENST00000256474 SRRM2Q9UQ35 2752 aaKnown RBP8.93□□□□□ -0.98
VHL-201ENST00000256474 DPH3Q96FX2 82 aa8.93□□□□□ -0.98
VHL-201ENST00000256474 NREPQ16612 68 aa8.93□□□□□ -0.98
VHL-201ENST00000256474 BPY2O14599 106 aa8.92□□□□□ -0.98
VHL-201ENST00000256474 EGFEM1PQ0D2K5 195 aa8.92□□□□□ -0.98
VHL-201ENST00000256474 SERTAD4-AS1Q5TG53 156 aa8.92□□□□□ -0.98
VHL-201ENST00000256474 TMEM258P61165 79 aa8.92□□□□□ -0.98
VHL-201ENST00000256474 CASC10Q5T4H9 136 aa8.92□□□□□ -0.98
VHL-201ENST00000256474 TM2D3Q9BRN9 247 aa8.92□□□□□ -0.98
VHL-201ENST00000256474 ELOF1P60002 83 aaKnown RBP8.91□□□□□ -0.98
VHL-201ENST00000256474 COL7A1Q02388 2944 aa8.9□□□□□ -0.98
VHL-201ENST00000256474 PRR4Q16378 134 aa8.9□□□□□ -0.98
VHL-201ENST00000256474 IGKV2-24A0A0C4DH68 120 aa8.9□□□□□ -0.99
VHL-201ENST00000256474 A0A0G2JQZ4 141 aa8.89□□□□□ -0.99
VHL-201ENST00000256474 A0A1W2PNN7 141 aa8.89□□□□□ -0.99
VHL-201ENST00000256474 UBE2BP63146 152 aa8.89□□□□□ -0.99
VHL-201ENST00000256474 TENM2Q9NT68 2774 aa8.89□□□□□ -0.99
VHL-201ENST00000256474 LOC110117498A0A087WWA1 95 aa8.89□□□□□ -0.99
VHL-201ENST00000256474 ETDCA0A1B0GVM5 59 aa8.88□□□□□ -0.99
VHL-201ENST00000256474 F8WEM9 126 aa8.88□□□□□ -0.99
VHL-201ENST00000256474 OXTP01178 125 aa8.88□□□□□ -0.99
VHL-201ENST00000256474 C7orf33Q8WU49 177 aa8.88□□□□□ -0.99
VHL-201ENST00000256474 ST20-AS1Q8NBB2 130 aa8.88□□□□□ -0.99
VHL-201ENST00000256474 FAM236DA0A1B0GTK5 79 aa8.87□□□□□ -0.99
VHL-201ENST00000256474 FAM236CP0DP71 79 aa8.87□□□□□ -0.99
VHL-201ENST00000256474 GVQW2A0A096LPI5 108 aaPredicted RBP8.87□□□□□ -0.99
VHL-201ENST00000256474 PDE6GP18545 87 aa8.85□□□□□ -0.99
VHL-201ENST00000256474 LINC00528Q8N1L1 170 aa8.85□□□□□ -0.99
VHL-201ENST00000256474 TRAV7A0A075B6U4 112 aa8.85□□□□□ -0.99
VHL-201ENST00000256474 DEFB116Q30KQ4 102 aa8.85□□□□□ -0.99
VHL-201ENST00000256474 TRBV7-4A0A0J9YYF1 115 aa8.84□□□□□ -0.99
VHL-201ENST00000256474 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.83□□□□□ -1
VHL-201ENST00000256474 DNAH10Q8IVF4 4471 aa8.83□□□□□ -1
VHL-201ENST00000256474 STAB2Q8WWQ8 2551 aa8.82□□□□□ -1
VHL-201ENST00000256474 KRTAP26-1Q6PEX3 210 aa8.82□□□□□ -1
VHL-201ENST00000256474 KRTAP24-1Q3LI83 254 aa8.82□□□□□ -1
VHL-201ENST00000256474 FAM30AQ9NZY2 134 aa8.82□□□□□ -1
VHL-201ENST00000256474 A0A096LNI7 61 aa8.81□□□□□ -1
VHL-201ENST00000256474 FUSP35637 526 aaKnown RBP eCLIP8.8□□□□□ -1
VHL-201ENST00000256474 Q8N377 158 aa8.8□□□□□ -1
VHL-201ENST00000256474 HIGD2AQ9BW72 106 aa8.8□□□□□ -1
VHL-201ENST00000256474 LINC01556Q5JQF7 62 aa8.8□□□□□ -1
VHL-201ENST00000256474 PSCAO43653 123 aa8.79□□□□□ -1
VHL-201ENST00000256474 CXCL6P80162 114 aa8.79□□□□□ -1
VHL-201ENST00000256474 LINC00588Q9Y4M8 146 aa8.79□□□□□ -1
VHL-201ENST00000256474 H7BZZ5 65 aa8.79□□□□□ -1
VHL-201ENST00000256474 ERC2-IT1O76042 136 aa8.78□□□□□ -1
VHL-201ENST00000256474 C1orf137Q5JT78 98 aa8.78□□□□□ -1
VHL-201ENST00000256474 PRLHP81277 87 aa8.77□□□□□ -1.01
VHL-201ENST00000256474 CMYA5Q8N3K9 4069 aa8.76□□□□□ -1.01
VHL-201ENST00000256474 H3BQ85 93 aa8.75□□□□□ -1.01
VHL-201ENST00000256474 TMEM254Q8TBM7 123 aa8.75□□□□□ -1.01
VHL-201ENST00000256474 Q9BRP9 147 aa8.75□□□□□ -1.01
VHL-201ENST00000256474 LINC00336Q6ZUF6 198 aa8.75□□□□□ -1.01
VHL-201ENST00000256474 SMIM29Q86T20 159 aa8.74□□□□□ -1.01
VHL-201ENST00000256474 RPS28P62857 69 aaKnown RBP8.74□□□□□ -1.01
VHL-201ENST00000256474 SPTSSBQ8NFR3 76 aa8.74□□□□□ -1.01
VHL-201ENST00000256474 V9GYY9 64 aa8.74□□□□□ -1.01
VHL-201ENST00000256474 LINC00474Q9P2X8 69 aa8.73□□□□□ -1.01
VHL-201ENST00000256474 IGKV4-1P06312 121 aa8.73□□□□□ -1.01
VHL-201ENST00000256474 UBE2DNLQ8IWF7 75 aa8.73□□□□□ -1.01
VHL-201ENST00000256474 C1orf195Q5TG92 126 aa8.72□□□□□ -1.01
VHL-201ENST00000256474 Q6ZRX8 168 aa8.72□□□□□ -1.01
VHL-201ENST00000256474 MRPL55Q7Z7F7 128 aaKnown RBP8.72□□□□□ -1.01
VHL-201ENST00000256474 H3BNG1 76 aa8.72□□□□□ -1.01
VHL-201ENST00000256474 KCNQ1DNQ9H478 68 aa8.72□□□□□ -1.01
VHL-201ENST00000256474 TRBV7-6A0A0J9YX20 115 aa8.71□□□□□ -1.01
VHL-201ENST00000256474 A0A1W2PNM2 257 aa8.71□□□□□ -1.01
VHL-201ENST00000256474 WFDC13Q8IUB5 93 aa8.71□□□□□ -1.02
VHL-201ENST00000256474 CHTF8P0CG12 524 aa8.7□□□□□ -1.02
VHL-201ENST00000256474 DHRS4-AS1Q9P1J3 65 aa8.7□□□□□ -1.02
VHL-201ENST00000256474 DNAH7Q8WXX0 4024 aa8.69□□□□□ -1.02
VHL-201ENST00000256474 IGLV1-50A0A075B6I6 118 aa8.69□□□□□ -1.02
VHL-201ENST00000256474 PSPHP1O15172 72 aa8.69□□□□□ -1.02
VHL-201ENST00000256474 DNAH10OSP0CZ25 163 aa8.69□□□□□ -1.02
VHL-201ENST00000256474 KLKP1Q107X0 134 aa8.68□□□□□ -1.02
VHL-201ENST00000256474 Q5XG85 94 aa8.67□□□□□ -1.02
VHL-201ENST00000256474 K7EQZ3 153 aa8.66□□□□□ -1.02
VHL-201ENST00000256474 REG3GQ6UW15 175 aa8.66□□□□□ -1.02
VHL-201ENST00000256474 SERP1Q9Y6X1 66 aa8.66□□□□□ -1.02
VHL-201ENST00000256474 A0A087WSZ3 146 aa8.66□□□□□ -1.02
VHL-201ENST00000256474 RPL37AP61513 92 aaKnown RBP8.65□□□□□ -1.02
VHL-201ENST00000256474 KRTAP7-1Q8IUC3 87 aa8.65□□□□□ -1.02
VHL-201ENST00000256474 PRYO14603 147 aa8.65□□□□□ -1.02
VHL-201ENST00000256474 WIPF1O43516 503 aa8.65□□□□□ -1.02
VHL-201ENST00000256474 LINC00476Q8WZB0 136 aa8.64□□□□□ -1.03
VHL-201ENST00000256474 DNAH9Q9NYC9 4486 aa8.63□□□□□ -1.03
VHL-201ENST00000256474 SEC61GP60059 68 aa8.63□□□□□ -1.03
VHL-201ENST00000256474 Q8NBF4 154 aa8.63□□□□□ -1.03
VHL-201ENST00000256474 PHF5AQ7RTV0 110 aaKnown RBP8.62□□□□□ -1.03
VHL-201ENST00000256474 UBE2AP49459 152 aa8.62□□□□□ -1.03
VHL-201ENST00000256474 K7EIL1 84 aa8.6□□□□□ -1.03
VHL-201ENST00000256474 IGLV5-48A0A075B6I7 105 aa8.6□□□□□ -1.03
VHL-201ENST00000256474 KRTAP1-5Q9BYS1 174 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms