RNA–Protein interactions for RNA: ENST00000253814.5

NDFIP1-201, Transcript of Nedd4 family interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP1, Length 3,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-201ENST00000253814 TRBV7-6A0A0J9YX20 115 aa11.79□□□□□ -0.52
NDFIP1-201ENST00000253814 PRYO14603 147 aa11.79□□□□□ -0.52
NDFIP1-201ENST00000253814 ELOF1P60002 83 aaKnown RBP11.78□□□□□ -0.52
NDFIP1-201ENST00000253814 OBSCN-AS1Q96MR7 158 aa11.78□□□□□ -0.52
NDFIP1-201ENST00000253814 KRTAP1-3Q8IUG1 177 aa11.78□□□□□ -0.52
NDFIP1-201ENST00000253814 DHRS4-AS1Q9P1J3 65 aa11.78□□□□□ -0.52
NDFIP1-201ENST00000253814 BAHCC1Q9P281 2608 aa11.78□□□□□ -0.52
NDFIP1-201ENST00000253814 ESRGQ1W209 222 aa11.78□□□□□ -0.52
NDFIP1-201ENST00000253814 NDUFS5O43920 106 aa11.77□□□□□ -0.52
NDFIP1-201ENST00000253814 Q8NDZ9 215 aa11.77□□□□□ -0.52
NDFIP1-201ENST00000253814 HIVEP1P15822 2718 aa11.77□□□□□ -0.53
NDFIP1-201ENST00000253814 H0Y9J4 135 aa11.77□□□□□ -0.53
NDFIP1-201ENST00000253814 KRTAP10-3P60369 221 aa11.76□□□□□ -0.53
NDFIP1-201ENST00000253814 C7orf33Q8WU49 177 aa11.76□□□□□ -0.53
NDFIP1-201ENST00000253814 CDK2AP2O75956 126 aa11.75□□□□□ -0.53
NDFIP1-201ENST00000253814 UBE2AP49459 152 aa11.75□□□□□ -0.53
NDFIP1-201ENST00000253814 STAB1Q9NY15 2570 aa11.75□□□□□ -0.53
NDFIP1-201ENST00000253814 COL6A5A8TX70 2615 aa11.75□□□□□ -0.53
NDFIP1-201ENST00000253814 VPREB1P12018 145 aa11.74□□□□□ -0.53
NDFIP1-201ENST00000253814 Q6ZRP5 223 aa11.73□□□□□ -0.53
NDFIP1-201ENST00000253814 SMIM29Q86T20 159 aa11.73□□□□□ -0.53
NDFIP1-201ENST00000253814 BSNQ9UPA5 3926 aa11.72□□□□□ -0.53
NDFIP1-201ENST00000253814 ATP5EP56381 51 aaPredicted RBP11.72□□□□□ -0.53
NDFIP1-201ENST00000253814 LINC00612Q8N6U2 182 aa11.72□□□□□ -0.53
NDFIP1-201ENST00000253814 LINC00167Q96N53 147 aa11.7□□□□□ -0.54
NDFIP1-201ENST00000253814 ST20-AS1Q8NBB2 130 aa11.7□□□□□ -0.54
NDFIP1-201ENST00000253814 H7BZZ5 65 aa11.69□□□□□ -0.54
NDFIP1-201ENST00000253814 LINC00474Q9P2X8 69 aa11.69□□□□□ -0.54
NDFIP1-201ENST00000253814 PRLHP81277 87 aa11.68□□□□□ -0.54
NDFIP1-201ENST00000253814 A0A087WSZ3 146 aa11.67□□□□□ -0.54
NDFIP1-201ENST00000253814 PRR34Q9NV39 138 aa11.66□□□□□ -0.54
NDFIP1-201ENST00000253814 LINC00208Q96KT6 92 aa11.66□□□□□ -0.54
NDFIP1-201ENST00000253814 FAM168BA1KXE4 195 aa11.65□□□□□ -0.54
NDFIP1-201ENST00000253814 PSPHP1O15172 72 aa11.65□□□□□ -0.54
NDFIP1-201ENST00000253814 SERTAD4-AS1Q5TG53 156 aa11.65□□□□□ -0.54
NDFIP1-201ENST00000253814 GVQW2A0A096LPI5 108 aaPredicted RBP11.64□□□□□ -0.55
NDFIP1-201ENST00000253814 NDUFB1O75438 58 aa11.64□□□□□ -0.55
NDFIP1-201ENST00000253814 MRPL55Q7Z7F7 128 aaKnown RBP11.64□□□□□ -0.55
NDFIP1-201ENST00000253814 LINC00528Q8N1L1 170 aa11.64□□□□□ -0.55
NDFIP1-201ENST00000253814 TRBV7-4A0A0J9YYF1 115 aa11.63□□□□□ -0.55
NDFIP1-201ENST00000253814 KRTAP1-1Q07627 177 aa11.63□□□□□ -0.55
NDFIP1-201ENST00000253814 BCE1O60756 84 aa11.62□□□□□ -0.55
NDFIP1-201ENST00000253814 REG3GQ6UW15 175 aa11.62□□□□□ -0.55
NDFIP1-201ENST00000253814 A0A0G2JQZ4 141 aa11.61□□□□□ -0.55
NDFIP1-201ENST00000253814 A0A1W2PNN7 141 aa11.61□□□□□ -0.55
NDFIP1-201ENST00000253814 KLKP1Q107X0 134 aa11.61□□□□□ -0.55
NDFIP1-201ENST00000253814 CSMD2Q7Z408 3487 aa11.61□□□□□ -0.55
NDFIP1-201ENST00000253814 C15orf56Q8N910 161 aa11.6□□□□□ -0.55
NDFIP1-201ENST00000253814 SPTSSBQ8NFR3 76 aa11.6□□□□□ -0.55
NDFIP1-201ENST00000253814 LINC01556Q5JQF7 62 aa11.59□□□□□ -0.55
NDFIP1-201ENST00000253814 LINC00336Q6ZUF6 198 aa11.59□□□□□ -0.55
NDFIP1-201ENST00000253814 PRO0628Q9UI54 55 aa11.58□□□□□ -0.56
NDFIP1-201ENST00000253814 Q6ZRX8 168 aa11.57□□□□□ -0.56
NDFIP1-201ENST00000253814 NSD1Q96L73 2696 aaPredicted RBP11.56□□□□□ -0.56
NDFIP1-201ENST00000253814 OXTP01178 125 aa11.56□□□□□ -0.56
NDFIP1-201ENST00000253814 C1orf195Q5TG92 126 aa11.56□□□□□ -0.56
NDFIP1-201ENST00000253814 Q8N377 158 aa11.56□□□□□ -0.56
NDFIP1-201ENST00000253814 B9D2Q9BPU9 175 aa11.55□□□□□ -0.56
NDFIP1-201ENST00000253814 Q8NBF4 154 aa11.55□□□□□ -0.56
NDFIP1-201ENST00000253814 HCG22E2RYF7 251 aa11.54□□□□□ -0.56
NDFIP1-201ENST00000253814 IGLV9-49A0A0B4J1Y8 123 aa11.54□□□□□ -0.56
NDFIP1-201ENST00000253814 IGKV4-1P06312 121 aa11.54□□□□□ -0.56
NDFIP1-201ENST00000253814 Q9BRP9 147 aa11.54□□□□□ -0.56
NDFIP1-201ENST00000253814 K7EQZ3 153 aa11.52□□□□□ -0.57
NDFIP1-201ENST00000253814 LINC00476Q8WZB0 136 aa11.51□□□□□ -0.57
NDFIP1-201ENST00000253814 RPL37AP61513 92 aaKnown RBP11.51□□□□□ -0.57
NDFIP1-201ENST00000253814 CASC2Q6XLA1 102 aa11.49□□□□□ -0.57
NDFIP1-201ENST00000253814 KCNQ1DNQ9H478 68 aa11.48□□□□□ -0.57
NDFIP1-201ENST00000253814 CASC10Q5T4H9 136 aa11.47□□□□□ -0.57
NDFIP1-201ENST00000253814 SPINK6Q6UWN8 80 aa11.47□□□□□ -0.57
NDFIP1-201ENST00000253814 V9GYY9 64 aa11.47□□□□□ -0.57
NDFIP1-201ENST00000253814 CHKB-CPT1BH3BT56 60 aa11.47□□□□□ -0.57
NDFIP1-201ENST00000253814 LINC00588Q9Y4M8 146 aa11.47□□□□□ -0.57
NDFIP1-201ENST00000253814 PCOTHQ58A44 107 aa11.46□□□□□ -0.57
NDFIP1-201ENST00000253814 H3BNG1 76 aa11.45□□□□□ -0.58
NDFIP1-201ENST00000253814 ERC2-IT1O76042 136 aa11.45□□□□□ -0.58
NDFIP1-201ENST00000253814 H0Y9P7 68 aa11.45□□□□□ -0.58
NDFIP1-201ENST00000253814 VPS13CQ709C8 3753 aa11.45□□□□□ -0.58
NDFIP1-201ENST00000253814 A0A1W2PNM2 257 aa11.45□□□□□ -0.58
NDFIP1-201ENST00000253814 Q5XG85 94 aa11.45□□□□□ -0.58
NDFIP1-201ENST00000253814 ZFHX3Q15911 3703 aa11.45□□□□□ -0.58
NDFIP1-201ENST00000253814 F8WDY8 70 aa11.43□□□□□ -0.58
NDFIP1-201ENST00000253814 KRTAP10-11P60412 298 aa11.42□□□□□ -0.58
NDFIP1-201ENST00000253814 CHTF8P0CG12 524 aa11.42□□□□□ -0.58
NDFIP1-201ENST00000253814 C14orf177Q52M58 125 aa11.42□□□□□ -0.58
NDFIP1-201ENST00000253814 IGLV1-50A0A075B6I6 118 aa11.42□□□□□ -0.58
NDFIP1-201ENST00000253814 VWFP04275 2813 aa11.41□□□□□ -0.58
NDFIP1-201ENST00000253814 A6NED7 52 aa11.4□□□□□ -0.58
NDFIP1-201ENST00000253814 PRR15LQ9BU68 103 aa11.39□□□□□ -0.59
NDFIP1-201ENST00000253814 PHF5AQ7RTV0 110 aaKnown RBP11.38□□□□□ -0.59
NDFIP1-201ENST00000253814 DNAH10OSP0CZ25 163 aa11.37□□□□□ -0.59
NDFIP1-201ENST00000253814 OCR1Q9BZK8 76 aa11.36□□□□□ -0.59
NDFIP1-201ENST00000253814 PMAIP1Q13794 54 aa11.35□□□□□ -0.59
NDFIP1-201ENST00000253814 C1orf64Q8NEQ6 169 aa11.35□□□□□ -0.59
NDFIP1-201ENST00000253814 IGHV6-1A0A0B4J1U7 121 aa11.35□□□□□ -0.59
NDFIP1-201ENST00000253814 KRTAP24-1Q3LI83 254 aa11.34□□□□□ -0.59
NDFIP1-201ENST00000253814 IGFL1Q6UW32 110 aa11.34□□□□□ -0.59
NDFIP1-201ENST00000253814 FP248Q71RG6 208 aaPredicted RBP11.33□□□□□ -0.6
NDFIP1-201ENST00000253814 FAM229BQ4G0N7 80 aa11.32□□□□□ -0.6
NDFIP1-201ENST00000253814 TENM1Q9UKZ4 2725 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms