RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 KLK12Q9UKR0 248 aa11.32□□□□□ -0.6
FOXA1-201ENST00000250448 DNAH9Q9NYC9 4486 aa11.32□□□□□ -0.6
FOXA1-201ENST00000250448 GVQW2A0A096LPI5 108 aaPredicted RBP11.31□□□□□ -0.6
FOXA1-201ENST00000250448 PDE6GP18545 87 aa11.31□□□□□ -0.6
FOXA1-201ENST00000250448 HAMPP81172 84 aa11.31□□□□□ -0.6
FOXA1-201ENST00000250448 DIRC1Q969H9 104 aa11.31□□□□□ -0.6
FOXA1-201ENST00000250448 PRR34Q9NV39 138 aa11.31□□□□□ -0.6
FOXA1-201ENST00000250448 BCE1O60756 84 aa11.3□□□□□ -0.6
FOXA1-201ENST00000250448 C6orf48Q9UBA6 75 aa11.3□□□□□ -0.6
FOXA1-201ENST00000250448 TRAV7A0A075B6U4 112 aa11.3□□□□□ -0.6
FOXA1-201ENST00000250448 PMAIP1Q13794 54 aa11.3□□□□□ -0.6
FOXA1-201ENST00000250448 XAGE1AQ9HD64 81 aa11.29□□□□□ -0.6
FOXA1-201ENST00000250448 MEGF8Q7Z7M0 2845 aa11.28□□□□□ -0.6
FOXA1-201ENST00000250448 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.27□□□□□ -0.61
FOXA1-201ENST00000250448 COX7BP24311 80 aa11.26□□□□□ -0.61
FOXA1-201ENST00000250448 CXCL6P80162 114 aa11.26□□□□□ -0.61
FOXA1-201ENST00000250448 ZNF73O43830 326 aaPredicted RBP11.26□□□□□ -0.61
FOXA1-201ENST00000250448 FP248Q71RG6 208 aaPredicted RBP11.26□□□□□ -0.61
FOXA1-201ENST00000250448 TRAV10A0A0B4J240 114 aa11.25□□□□□ -0.61
FOXA1-201ENST00000250448 TRBV7-4A0A0J9YYF1 115 aa11.25□□□□□ -0.61
FOXA1-201ENST00000250448 WFDC10BQ8IUB3 73 aa11.25□□□□□ -0.61
FOXA1-201ENST00000250448 ELOF1P60002 83 aaKnown RBP11.24□□□□□ -0.61
FOXA1-201ENST00000250448 PRKDCP78527 4128 aaKnown RBP11.24□□□□□ -0.61
FOXA1-201ENST00000250448 ESRGQ1W209 222 aa11.23□□□□□ -0.61
FOXA1-201ENST00000250448 H7BZZ5 65 aa11.22□□□□□ -0.61
FOXA1-201ENST00000250448 TRBV7-6A0A0J9YX20 115 aa11.21□□□□□ -0.61
FOXA1-201ENST00000250448 VPREB1P12018 145 aa11.21□□□□□ -0.62
FOXA1-201ENST00000250448 H3BNG1 76 aa11.2□□□□□ -0.62
FOXA1-201ENST00000250448 KLKP1Q107X0 134 aa11.2□□□□□ -0.62
FOXA1-201ENST00000250448 SCXQ7RTU7 201 aa11.2□□□□□ -0.62
FOXA1-201ENST00000250448 LINC00474Q9P2X8 69 aa11.2□□□□□ -0.62
FOXA1-201ENST00000250448 TENM2Q9NT68 2774 aa11.2□□□□□ -0.62
FOXA1-201ENST00000250448 HIGD2BQ4VC39 106 aa11.19□□□□□ -0.62
FOXA1-201ENST00000250448 CD164Q04900 197 aa11.19□□□□□ -0.62
FOXA1-201ENST00000250448 CAMK2N2Q96S95 79 aa11.19□□□□□ -0.62
FOXA1-201ENST00000250448 B9D2Q9BPU9 175 aa11.18□□□□□ -0.62
FOXA1-201ENST00000250448 SERP1Q9Y6X1 66 aa11.17□□□□□ -0.62
FOXA1-201ENST00000250448 EPM2AB3EWF7 344 aa11.17□□□□□ -0.62
FOXA1-201ENST00000250448 M0R378 163 aa11.17□□□□□ -0.62
FOXA1-201ENST00000250448 SNURFQ9Y675 71 aa11.17□□□□□ -0.62
FOXA1-201ENST00000250448 RMI2Q96E14 147 aa11.15□□□□□ -0.62
FOXA1-201ENST00000250448 LYSTQ99698 3801 aa11.15□□□□□ -0.62
FOXA1-201ENST00000250448 LINC00528Q8N1L1 170 aa11.15□□□□□ -0.62
FOXA1-201ENST00000250448 SMIM26A0A096LP01 95 aa11.14□□□□□ -0.63
FOXA1-201ENST00000250448 Q6ZRU5 148 aa11.14□□□□□ -0.63
FOXA1-201ENST00000250448 KRTAP26-1Q6PEX3 210 aa11.13□□□□□ -0.63
FOXA1-201ENST00000250448 CSMD3Q7Z407 3707 aa11.13□□□□□ -0.63
FOXA1-201ENST00000250448 F8WEM9 126 aa11.11□□□□□ -0.63
FOXA1-201ENST00000250448 C15orf56Q8N910 161 aa11.11□□□□□ -0.63
FOXA1-201ENST00000250448 LINC00588Q9Y4M8 146 aa11.11□□□□□ -0.63
FOXA1-201ENST00000250448 NREPQ16612 68 aa11.09□□□□□ -0.63
FOXA1-201ENST00000250448 NDUFC1O43677 76 aa11.07□□□□□ -0.64
FOXA1-201ENST00000250448 TGP01266 2768 aa11.07□□□□□ -0.64
FOXA1-201ENST00000250448 BPY2O14599 106 aa11.06□□□□□ -0.64
FOXA1-201ENST00000250448 FBN3Q75N90 2809 aa11.06□□□□□ -0.64
FOXA1-201ENST00000250448 Q8N9L7 120 aa11.06□□□□□ -0.64
FOXA1-201ENST00000250448 IGKV4-1P06312 121 aa11.05□□□□□ -0.64
FOXA1-201ENST00000250448 Q6ZRP5 223 aa11.05□□□□□ -0.64
FOXA1-201ENST00000250448 MPLKIPQ8TAP9 179 aa11.05□□□□□ -0.64
FOXA1-201ENST00000250448 LINC01556Q5JQF7 62 aa11.04□□□□□ -0.64
FOXA1-201ENST00000250448 MRPL55Q7Z7F7 128 aaKnown RBP11.03□□□□□ -0.64
FOXA1-201ENST00000250448 H3BS24 57 aa11.02□□□□□ -0.64
FOXA1-201ENST00000250448 TMEM254Q8TBM7 123 aa11.02□□□□□ -0.64
FOXA1-201ENST00000250448 PLECQ15149 4684 aaKnown RBP11.02□□□□□ -0.64
FOXA1-201ENST00000250448 ERC2-IT1O76042 136 aa11.02□□□□□ -0.65
FOXA1-201ENST00000250448 ATP5EP56381 51 aaPredicted RBP11.01□□□□□ -0.65
FOXA1-201ENST00000250448 DNAH7Q8WXX0 4024 aa11.01□□□□□ -0.65
FOXA1-201ENST00000250448 IGKV2D-24A0A075B6R9 120 aa11.01□□□□□ -0.65
FOXA1-201ENST00000250448 C3orf84H3BNL1 204 aa11□□□□□ -0.65
FOXA1-201ENST00000250448 DNAH10OSP0CZ25 163 aa11□□□□□ -0.65
FOXA1-201ENST00000250448 NKAPP1Q8N9T2 125 aa11□□□□□ -0.65
FOXA1-201ENST00000250448 KCNQ1DNQ9H478 68 aa11□□□□□ -0.65
FOXA1-201ENST00000250448 SYCNQ0VAF6 134 aa11□□□□□ -0.65
FOXA1-201ENST00000250448 STARD9Q9P2P6 4700 aa10.99□□□□□ -0.65
FOXA1-201ENST00000250448 DEFB105AQ8NG35 78 aa10.99□□□□□ -0.65
FOXA1-201ENST00000250448 C7orf33Q8WU49 177 aa10.99□□□□□ -0.65
FOXA1-201ENST00000250448 SERTAD4-AS1Q5TG53 156 aa10.98□□□□□ -0.65
FOXA1-201ENST00000250448 Q8N377 158 aa10.98□□□□□ -0.65
FOXA1-201ENST00000250448 OCR1Q9BZK8 76 aa10.98□□□□□ -0.65
FOXA1-201ENST00000250448 APLNQ9ULZ1 77 aa10.98□□□□□ -0.65
FOXA1-201ENST00000250448 DYNC2H1Q8NCM8 4307 aaKnown RBP10.97□□□□□ -0.65
FOXA1-201ENST00000250448 KRTAP21-3Q3LHN1 58 aa10.96□□□□□ -0.65
FOXA1-201ENST00000250448 IGLV5-48A0A075B6I7 105 aa10.95□□□□□ -0.66
FOXA1-201ENST00000250448 CASC10Q5T4H9 136 aa10.95□□□□□ -0.66
FOXA1-201ENST00000250448 PRR15Q8IV56 129 aa10.95□□□□□ -0.66
FOXA1-201ENST00000250448 UBE2DNLQ8IWF7 75 aa10.95□□□□□ -0.66
FOXA1-201ENST00000250448 DNAH1Q9P2D7 4330 aa10.95□□□□□ -0.66
FOXA1-201ENST00000250448 DNAH10Q8IVF4 4471 aa10.94□□□□□ -0.66
FOXA1-201ENST00000250448 RBM12B-AS1Q9P1G2 102 aa10.94□□□□□ -0.66
FOXA1-201ENST00000250448 PRYO14603 147 aa10.93□□□□□ -0.66
FOXA1-201ENST00000250448 KRTAP1-5Q9BYS1 174 aa10.93□□□□□ -0.66
FOXA1-201ENST00000250448 FAM229BQ4G0N7 80 aa10.92□□□□□ -0.66
FOXA1-201ENST00000250448 DHRS4-AS1Q9P1J3 65 aa10.92□□□□□ -0.66
FOXA1-201ENST00000250448 FUSP35637 526 aaKnown RBP eCLIP10.91□□□□□ -0.66
FOXA1-201ENST00000250448 Q6ZRX8 168 aa10.91□□□□□ -0.66
FOXA1-201ENST00000250448 A0A1W2PNM2 257 aa10.89□□□□□ -0.67
FOXA1-201ENST00000250448 PLA2G2DQ9UNK4 145 aa10.89□□□□□ -0.67
FOXA1-201ENST00000250448 A0A1B0GW54 56 aa10.89□□□□□ -0.67
FOXA1-201ENST00000250448 TLX1NBP0CAT3 122 aa10.89□□□□□ -0.67
FOXA1-201ENST00000250448 Q9BRP9 147 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms