RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 KRTAP10-11P60412 298 aa6.74□□□□□ -1.33
COPB1-201ENST00000249923 IGKV2D-24A0A075B6R9 120 aa6.74□□□□□ -1.33
COPB1-201ENST00000249923 FAM30AQ9NZY2 134 aa6.74□□□□□ -1.33
COPB1-201ENST00000249923 CSMD3Q7Z407 3707 aa6.73□□□□□ -1.33
COPB1-201ENST00000249923 COX7BP24311 80 aa6.73□□□□□ -1.33
COPB1-201ENST00000249923 HUWE1Q7Z6Z7 4374 aaKnown RBP6.72□□□□□ -1.33
COPB1-201ENST00000249923 OXLD1Q5BKU9 147 aa6.72□□□□□ -1.33
COPB1-201ENST00000249923 RPL37AP8A6NKH3 93 aa6.72□□□□□ -1.33
COPB1-201ENST00000249923 DEFB116Q30KQ4 102 aa6.72□□□□□ -1.33
COPB1-201ENST00000249923 TRAV7A0A075B6U4 112 aa6.71□□□□□ -1.33
COPB1-201ENST00000249923 MUC7Q8TAX7 377 aa6.71□□□□□ -1.34
COPB1-201ENST00000249923 GVQW2A0A096LPI5 108 aaPredicted RBP6.7□□□□□ -1.34
COPB1-201ENST00000249923 ZNF73O43830 326 aaPredicted RBP6.7□□□□□ -1.34
COPB1-201ENST00000249923 ATP5EP2Q5VTU8 51 aa6.7□□□□□ -1.34
COPB1-201ENST00000249923 NKAPP1Q8N9T2 125 aa6.7□□□□□ -1.34
COPB1-201ENST00000249923 COL7A1Q02388 2944 aa6.7□□□□□ -1.34
COPB1-201ENST00000249923 RPS28P62857 69 aaKnown RBP6.7□□□□□ -1.34
COPB1-201ENST00000249923 Q6ZTC4 211 aa6.7□□□□□ -1.34
COPB1-201ENST00000249923 C15orf56Q8N910 161 aa6.7□□□□□ -1.34
COPB1-201ENST00000249923 DNAH7Q8WXX0 4024 aa6.7□□□□□ -1.34
COPB1-201ENST00000249923 Q6ZQT0 140 aa6.7□□□□□ -1.34
COPB1-201ENST00000249923 DNAH9Q9NYC9 4486 aa6.69□□□□□ -1.34
COPB1-201ENST00000249923 TRBV7-6A0A0J9YX20 115 aa6.69□□□□□ -1.34
COPB1-201ENST00000249923 A0A096LNI7 61 aa6.69□□□□□ -1.34
COPB1-201ENST00000249923 HIGD2AQ9BW72 106 aa6.69□□□□□ -1.34
COPB1-201ENST00000249923 KPRPQ5T749 579 aaPredicted RBP6.69□□□□□ -1.34
COPB1-201ENST00000249923 H7BZZ5 65 aa6.68□□□□□ -1.34
COPB1-201ENST00000249923 TMEM254Q8TBM7 123 aa6.68□□□□□ -1.34
COPB1-201ENST00000249923 PSPHP1O15172 72 aa6.67□□□□□ -1.34
COPB1-201ENST00000249923 FUSP35637 526 aaKnown RBP eCLIP6.67□□□□□ -1.341e-5■■■□□ 16.6
COPB1-201ENST00000249923 Q5XG85 94 aa6.67□□□□□ -1.34
COPB1-201ENST00000249923 SERP1Q9Y6X1 66 aa6.67□□□□□ -1.34
COPB1-201ENST00000249923 VPREB1P12018 145 aa6.67□□□□□ -1.34
COPB1-201ENST00000249923 ESRGQ1W209 222 aa6.67□□□□□ -1.34
COPB1-201ENST00000249923 Q6ZRU5 148 aa6.67□□□□□ -1.34
COPB1-201ENST00000249923 NDUFC2-KCTD14E9PQ53 114 aa6.66□□□□□ -1.34
COPB1-201ENST00000249923 A0A0G2JQZ4 141 aa6.66□□□□□ -1.34
COPB1-201ENST00000249923 A0A1W2PNN7 141 aa6.66□□□□□ -1.34
COPB1-201ENST00000249923 UBE2BP63146 152 aa6.66□□□□□ -1.34
COPB1-201ENST00000249923 SMIM26A0A096LP01 95 aa6.65□□□□□ -1.34
COPB1-201ENST00000249923 LOC110117498A0A087WWA1 95 aa6.64□□□□□ -1.35
COPB1-201ENST00000249923 Q6ZRP5 223 aa6.64□□□□□ -1.35
COPB1-201ENST00000249923 WFDC13Q8IUB5 93 aa6.64□□□□□ -1.35
COPB1-201ENST00000249923 ELOF1P60002 83 aaKnown RBP6.63□□□□□ -1.35
COPB1-201ENST00000249923 H3BNG1 76 aa6.62□□□□□ -1.35
COPB1-201ENST00000249923 ETDCA0A1B0GVM5 59 aa6.62□□□□□ -1.35
COPB1-201ENST00000249923 EGFEM1PQ0D2K5 195 aa6.61□□□□□ -1.35
COPB1-201ENST00000249923 SMIM29Q86T20 159 aa6.61□□□□□ -1.35
COPB1-201ENST00000249923 IGKV2-24A0A0C4DH68 120 aa6.61□□□□□ -1.35
COPB1-201ENST00000249923 TRBV7-4A0A0J9YYF1 115 aa6.6□□□□□ -1.35
COPB1-201ENST00000249923 C1orf195Q5TG92 126 aa6.6□□□□□ -1.35
COPB1-201ENST00000249923 PRO0628Q9UI54 55 aa6.6□□□□□ -1.35
COPB1-201ENST00000249923 KRTAP24-1Q3LI83 254 aa6.6□□□□□ -1.35
COPB1-201ENST00000249923 LINC00528Q8N1L1 170 aa6.6□□□□□ -1.35
COPB1-201ENST00000249923 PRYO14603 147 aa6.6□□□□□ -1.35
COPB1-201ENST00000249923 CASC10Q5T4H9 136 aa6.6□□□□□ -1.35
COPB1-201ENST00000249923 SERTAD4-AS1Q5TG53 156 aa6.6□□□□□ -1.35
COPB1-201ENST00000249923 TENM2Q9NT68 2774 aa6.59□□□□□ -1.35
COPB1-201ENST00000249923 PDE6GP18545 87 aa6.59□□□□□ -1.35
COPB1-201ENST00000249923 FAM229BQ4G0N7 80 aa6.59□□□□□ -1.35
COPB1-201ENST00000249923 SPTSSBQ8NFR3 76 aa6.59□□□□□ -1.35
COPB1-201ENST00000249923 SRRM2Q9UQ35 2752 aaKnown RBP6.59□□□□□ -1.36
COPB1-201ENST00000249923 KRTAP7-1Q8IUC3 87 aa6.58□□□□□ -1.36
COPB1-201ENST00000249923 LINC01556Q5JQF7 62 aa6.58□□□□□ -1.36
COPB1-201ENST00000249923 FP248Q71RG6 208 aaPredicted RBP6.58□□□□□ -1.36
COPB1-201ENST00000249923 DEFB131BA0A096LNP1 70 aa6.57□□□□□ -1.36
COPB1-201ENST00000249923 M0R378 163 aa6.57□□□□□ -1.36
COPB1-201ENST00000249923 ST20-AS1Q8NBB2 130 aa6.57□□□□□ -1.36
COPB1-201ENST00000249923 STAB2Q8WWQ8 2551 aa6.57□□□□□ -1.36
COPB1-201ENST00000249923 FAM168BA1KXE4 195 aa6.56□□□□□ -1.36
COPB1-201ENST00000249923 CXCL6P80162 114 aa6.55□□□□□ -1.36
COPB1-201ENST00000249923 V9GYY9 64 aa6.55□□□□□ -1.36
COPB1-201ENST00000249923 DYNC2H1Q8NCM8 4307 aaKnown RBP6.55□□□□□ -1.36
COPB1-201ENST00000249923 SYCNQ0VAF6 134 aa6.54□□□□□ -1.36
COPB1-201ENST00000249923 KLKP1Q107X0 134 aa6.54□□□□□ -1.36
COPB1-201ENST00000249923 C1orf137Q5JT78 98 aa6.54□□□□□ -1.36
COPB1-201ENST00000249923 C11orf45Q8TAV5 145 aa6.54□□□□□ -1.36
COPB1-201ENST00000249923 DNAH10OSP0CZ25 163 aa6.54□□□□□ -1.36
COPB1-201ENST00000249923 C7orf33Q8WU49 177 aa6.54□□□□□ -1.36
COPB1-201ENST00000249923 PLECQ15149 4684 aaKnown RBP6.53□□□□□ -1.36
COPB1-201ENST00000249923 LINC00588Q9Y4M8 146 aa6.53□□□□□ -1.36
COPB1-201ENST00000249923 KRTAP4-16G5E9R7 235 aaPredicted RBP6.53□□□□□ -1.36
COPB1-201ENST00000249923 NDUFC1O43677 76 aa6.53□□□□□ -1.36
COPB1-201ENST00000249923 KCNQ1DNQ9H478 68 aa6.53□□□□□ -1.36
COPB1-201ENST00000249923 LINC00208Q96KT6 92 aa6.52□□□□□ -1.37
COPB1-201ENST00000249923 Q9BRP9 147 aa6.52□□□□□ -1.37
COPB1-201ENST00000249923 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.52□□□□□ -1.37
COPB1-201ENST00000249923 Q8N377 158 aa6.52□□□□□ -1.37
COPB1-201ENST00000249923 RPL37AP61513 92 aaKnown RBP6.51□□□□□ -1.37
COPB1-201ENST00000249923 IGKV4-1P06312 121 aa6.5□□□□□ -1.37
COPB1-201ENST00000249923 H0Y9J4 135 aa6.49□□□□□ -1.37
COPB1-201ENST00000249923 PRLHP81277 87 aa6.49□□□□□ -1.37
COPB1-201ENST00000249923 NDUFS5O43920 106 aa6.49□□□□□ -1.37
COPB1-201ENST00000249923 A0A087WSZ3 146 aa6.48□□□□□ -1.37
COPB1-201ENST00000249923 K7EQZ3 153 aa6.48□□□□□ -1.37
COPB1-201ENST00000249923 PSCAO43653 123 aa6.48□□□□□ -1.37
COPB1-201ENST00000249923 TLX1NBP0CAT3 122 aa6.48□□□□□ -1.37
COPB1-201ENST00000249923 H3BQ85 93 aa6.48□□□□□ -1.37
COPB1-201ENST00000249923 MP68P56378 58 aa6.47□□□□□ -1.37
COPB1-201ENST00000249923 IGLV1-50A0A075B6I6 118 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms