RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 PRYO14603 147 aa9.33□□□□□ -0.92
NFKB1-201ENST00000226574 SVIPQ8NHG7 77 aa9.33□□□□□ -0.92
NFKB1-201ENST00000226574 CSNK1G2-AS1Q8NCQ2 148 aa9.32□□□□□ -0.92
NFKB1-201ENST00000226574 CELSR1Q9NYQ6 3014 aa9.32□□□□□ -0.92
NFKB1-201ENST00000226574 A0A096LNT2 108 aa9.31□□□□□ -0.92
NFKB1-201ENST00000226574 TRBV7-6A0A0J9YX20 115 aa9.31□□□□□ -0.92
NFKB1-201ENST00000226574 B9D2Q9BPU9 175 aa9.31□□□□□ -0.92
NFKB1-201ENST00000226574 C7orf33Q8WU49 177 aa9.31□□□□□ -0.92
NFKB1-201ENST00000226574 SVEP1Q4LDE5 3571 aa9.3□□□□□ -0.92
NFKB1-201ENST00000226574 SMIM29Q86T20 159 aa9.3□□□□□ -0.92
NFKB1-201ENST00000226574 ST20-AS1Q8NBB2 130 aa9.28□□□□□ -0.92
NFKB1-201ENST00000226574 C19orf73Q9NVV2 129 aa9.28□□□□□ -0.92
NFKB1-201ENST00000226574 CHKB-CPT1BH3BT56 60 aa9.27□□□□□ -0.93
NFKB1-201ENST00000226574 C22orf24Q9Y442 160 aa9.26□□□□□ -0.93
NFKB1-201ENST00000226574 MRPL55Q7Z7F7 128 aaKnown RBP9.26□□□□□ -0.93
NFKB1-201ENST00000226574 PCOTHQ58A44 107 aa9.26□□□□□ -0.93
NFKB1-201ENST00000226574 CXCL6P80162 114 aa9.25□□□□□ -0.93
NFKB1-201ENST00000226574 A0A0G2JQZ4 141 aa9.25□□□□□ -0.93
NFKB1-201ENST00000226574 A0A1W2PNN7 141 aa9.25□□□□□ -0.93
NFKB1-201ENST00000226574 REG3GQ6UW15 175 aa9.25□□□□□ -0.93
NFKB1-201ENST00000226574 Q8NAQ8 132 aa9.25□□□□□ -0.93
NFKB1-201ENST00000226574 LINC00167Q96N53 147 aa9.25□□□□□ -0.93
NFKB1-201ENST00000226574 Q6ZRP5 223 aa9.24□□□□□ -0.93
NFKB1-201ENST00000226574 C1orf195Q5TG92 126 aa9.23□□□□□ -0.93
NFKB1-201ENST00000226574 ATP5EP56381 51 aaPredicted RBP9.23□□□□□ -0.93
NFKB1-201ENST00000226574 ELOF1P60002 83 aaKnown RBP9.23□□□□□ -0.93
NFKB1-201ENST00000226574 C2orf48Q96LS8 159 aa9.23□□□□□ -0.93
NFKB1-201ENST00000226574 APCP25054 2843 aa9.23□□□□□ -0.93
NFKB1-201ENST00000226574 FAM168BA1KXE4 195 aa9.22□□□□□ -0.93
NFKB1-201ENST00000226574 A6NED7 52 aa9.22□□□□□ -0.93
NFKB1-201ENST00000226574 IL17DQ8TAD2 202 aa9.22□□□□□ -0.93
NFKB1-201ENST00000226574 LINC00474Q9P2X8 69 aa9.22□□□□□ -0.93
NFKB1-201ENST00000226574 Q9BRP9 147 aa9.22□□□□□ -0.93
NFKB1-201ENST00000226574 RPS28P62857 69 aaKnown RBP9.21□□□□□ -0.94
NFKB1-201ENST00000226574 IGLV6-57P01721 117 aa9.2□□□□□ -0.94
NFKB1-201ENST00000226574 VPREB1P12018 145 aa9.2□□□□□ -0.94
NFKB1-201ENST00000226574 MXRA5Q9NR99 2828 aa9.19□□□□□ -0.94
NFKB1-201ENST00000226574 V9GYY9 64 aa9.19□□□□□ -0.94
NFKB1-201ENST00000226574 CASC2Q6XLA1 102 aa9.18□□□□□ -0.94
NFKB1-201ENST00000226574 CYSTM1Q9H1C7 97 aa9.18□□□□□ -0.94
NFKB1-201ENST00000226574 STAB2Q8WWQ8 2551 aa9.18□□□□□ -0.94
NFKB1-201ENST00000226574 LOC110117498A0A087WWA1 95 aa9.18□□□□□ -0.94
NFKB1-201ENST00000226574 C14orf177Q52M58 125 aa9.18□□□□□ -0.94
NFKB1-201ENST00000226574 SERTAD4-AS1Q5TG53 156 aa9.17□□□□□ -0.94
NFKB1-201ENST00000226574 KRTAP10-3P60369 221 aa9.17□□□□□ -0.94
NFKB1-201ENST00000226574 RPL37AP61513 92 aaKnown RBP9.17□□□□□ -0.94
NFKB1-201ENST00000226574 IGHV6-1A0A0B4J1U7 121 aa9.15□□□□□ -0.94
NFKB1-201ENST00000226574 HCG22E2RYF7 251 aa9.15□□□□□ -0.94
NFKB1-201ENST00000226574 PRR15LQ9BU68 103 aa9.15□□□□□ -0.94
NFKB1-201ENST00000226574 PMAIP1Q13794 54 aa9.15□□□□□ -0.94
NFKB1-201ENST00000226574 LINC01556Q5JQF7 62 aa9.14□□□□□ -0.95
NFKB1-201ENST00000226574 H0Y9P7 68 aa9.14□□□□□ -0.95
NFKB1-201ENST00000226574 RETNLBQ9BQ08 111 aa9.14□□□□□ -0.95
NFKB1-201ENST00000226574 NIPBLQ6KC79 2804 aaeCLIP9.14□□□□□ -0.95
NFKB1-201ENST00000226574 CHTF8P0CG12 524 aa9.13□□□□□ -0.95
NFKB1-201ENST00000226574 Q6ZRX8 168 aa9.12□□□□□ -0.95
NFKB1-201ENST00000226574 LINC00476Q8WZB0 136 aa9.12□□□□□ -0.95
NFKB1-201ENST00000226574 H7BZZ5 65 aa9.11□□□□□ -0.95
NFKB1-201ENST00000226574 Q8NBF4 154 aa9.11□□□□□ -0.95
NFKB1-201ENST00000226574 Q8NDZ9 215 aa9.11□□□□□ -0.95
NFKB1-201ENST00000226574 PRO0628Q9UI54 55 aa9.11□□□□□ -0.95
NFKB1-201ENST00000226574 LINC00528Q8N1L1 170 aa9.1□□□□□ -0.95
NFKB1-201ENST00000226574 LINC00336Q6ZUF6 198 aa9.1□□□□□ -0.95
NFKB1-201ENST00000226574 K7EQZ3 153 aa9.1□□□□□ -0.95
NFKB1-201ENST00000226574 KRTAP1-3Q8IUG1 177 aa9.09□□□□□ -0.95
NFKB1-201ENST00000226574 PHF5AQ7RTV0 110 aaKnown RBP9.08□□□□□ -0.96
NFKB1-201ENST00000226574 CIRBP-AS1Q8TBR5 109 aa9.08□□□□□ -0.96
NFKB1-201ENST00000226574 PRR34Q9NV39 138 aa9.08□□□□□ -0.96
NFKB1-201ENST00000226574 LINC00588Q9Y4M8 146 aa9.08□□□□□ -0.96
NFKB1-201ENST00000226574 SPENQ96T58 3664 aaKnown RBP9.08□□□□□ -0.96
NFKB1-201ENST00000226574 TRBV7-4A0A0J9YYF1 115 aa9.08□□□□□ -0.96
NFKB1-201ENST00000226574 C4orf48Q5BLP8 95 aa9.07□□□□□ -0.96
NFKB1-201ENST00000226574 Q8N377 158 aa9.07□□□□□ -0.96
NFKB1-201ENST00000226574 C15orf56Q8N910 161 aa9.07□□□□□ -0.96
NFKB1-201ENST00000226574 C1orf64Q8NEQ6 169 aa9.07□□□□□ -0.96
NFKB1-201ENST00000226574 GVQW2A0A096LPI5 108 aaPredicted RBP9.06□□□□□ -0.96
NFKB1-201ENST00000226574 LINC01600Q96MT4 127 aa9.06□□□□□ -0.96
NFKB1-201ENST00000226574 CASC10Q5T4H9 136 aa9.05□□□□□ -0.96
NFKB1-201ENST00000226574 LINC00612Q8N6U2 182 aa9.04□□□□□ -0.96
NFKB1-201ENST00000226574 KLKP1Q107X0 134 aa9.03□□□□□ -0.96
NFKB1-201ENST00000226574 ERC2-IT1O76042 136 aa9.03□□□□□ -0.96
NFKB1-201ENST00000226574 KRTAP24-1Q3LI83 254 aa9.03□□□□□ -0.96
NFKB1-201ENST00000226574 OBSCN-AS1Q96MR7 158 aa9.02□□□□□ -0.96
NFKB1-201ENST00000226574 BCE1O60756 84 aa9.02□□□□□ -0.97
NFKB1-201ENST00000226574 LY6G6CO95867 125 aa9.02□□□□□ -0.97
NFKB1-201ENST00000226574 KRTAP1-1Q07627 177 aa9□□□□□ -0.97
NFKB1-201ENST00000226574 KMT2BQ9UMN6 2715 aaPredicted RBP9□□□□□ -0.97
NFKB1-201ENST00000226574 EPM2AB3EWF7 344 aa8.99□□□□□ -0.97
NFKB1-201ENST00000226574 KRTAP10-11P60412 298 aa8.99□□□□□ -0.97
NFKB1-201ENST00000226574 KCNQ1DNQ9H478 68 aa8.99□□□□□ -0.97
NFKB1-201ENST00000226574 A0A1W2PNM2 257 aa8.98□□□□□ -0.97
NFKB1-201ENST00000226574 A8MUN3 132 aa8.98□□□□□ -0.97
NFKB1-201ENST00000226574 SPAG11AQ6PDA7 123 aa8.98□□□□□ -0.97
NFKB1-201ENST00000226574 IGLV1-50A0A075B6I6 118 aa8.97□□□□□ -0.97
NFKB1-201ENST00000226574 MOBPQ13875 183 aa8.96□□□□□ -0.98
NFKB1-201ENST00000226574 H3BNG1 76 aa8.95□□□□□ -0.98
NFKB1-201ENST00000226574 F8WDY8 70 aa8.95□□□□□ -0.98
NFKB1-201ENST00000226574 hDV103S1A0JD37 113 aa8.95□□□□□ -0.98
NFKB1-201ENST00000226574 SPINK1P00995 79 aa8.94□□□□□ -0.98
NFKB1-201ENST00000226574 IGFL1Q6UW32 110 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms