RNA–Protein interactions for RNA: ENST00000200181.7

ITGB4-201, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene ITGB4, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-201ENST00000200181 IGF2RP11717 2491 aa11.2□□□□□ -0.62
ITGB4-201ENST00000200181 ANAPC11Q9NYG5 84 aa11.19□□□□□ -0.62
ITGB4-201ENST00000200181 TLX1NBP0CAT3 122 aa11.18□□□□□ -0.62
ITGB4-201ENST00000200181 FN1P02751 2386 aaKnown RBP11.18□□□□□ -0.62
ITGB4-201ENST00000200181 NCOR2Q9Y618 2525 aa11.16□□□□□ -0.62
ITGB4-201ENST00000200181 LRRK2Q5S007 2527 aa11.15□□□□□ -0.62
ITGB4-201ENST00000200181 COL4A2P08572 1712 aa11.14□□□□□ -0.63
ITGB4-201ENST00000200181 IGLV7-43P04211 117 aa11.14□□□□□ -0.63
ITGB4-201ENST00000200181 A0A1W2PNM2 257 aa11.14□□□□□ -0.63
ITGB4-201ENST00000200181 A0A087WTM6 91 aa11.13□□□□□ -0.63
ITGB4-201ENST00000200181 JMJD1CQ15652 2540 aa11.12□□□□□ -0.63
ITGB4-201ENST00000200181 SPRR4Q96PI1 79 aa11.12□□□□□ -0.63
ITGB4-201ENST00000200181 Q1T7F1 81 aa11.12□□□□□ -0.63
ITGB4-201ENST00000200181 C9orf163Q8N9P6 203 aa11.11□□□□□ -0.63
ITGB4-201ENST00000200181 ZNF575Q86XF7 245 aa11.1□□□□□ -0.63
ITGB4-201ENST00000200181 SMR3BP02814 79 aaPredicted RBP11.1□□□□□ -0.63
ITGB4-201ENST00000200181 KRTAP10-11P60412 298 aa11.09□□□□□ -0.63
ITGB4-201ENST00000200181 ABCA12Q86UK0 2595 aa11.09□□□□□ -0.63
ITGB4-201ENST00000200181 PSORS1C2Q9UIG4 136 aa11.08□□□□□ -0.64
ITGB4-201ENST00000200181 ZNF462Q96JM2 2506 aa11.07□□□□□ -0.64
ITGB4-201ENST00000200181 K7EIL1 84 aa11.06□□□□□ -0.64
ITGB4-201ENST00000200181 C19orf73Q9NVV2 129 aa11.05□□□□□ -0.64
ITGB4-201ENST00000200181 PRR26Q8N8Z3 221 aa11.04□□□□□ -0.64
ITGB4-201ENST00000200181 LINC00483Q53H64 154 aa11.03□□□□□ -0.64
ITGB4-201ENST00000200181 LINC00612Q8N6U2 182 aa11.02□□□□□ -0.64
ITGB4-201ENST00000200181 TLN1Q9Y490 2541 aaKnown RBP11.01□□□□□ -0.65
ITGB4-201ENST00000200181 H3BS24 57 aa11□□□□□ -0.65
ITGB4-201ENST00000200181 GIG44P09565 113 aaPredicted RBP11□□□□□ -0.65
ITGB4-201ENST00000200181 OCR1Q9BZK8 76 aa10.99□□□□□ -0.65
ITGB4-201ENST00000200181 TLN2Q9Y4G6 2542 aa10.98□□□□□ -0.65
ITGB4-201ENST00000200181 WIPF1O43516 503 aa10.98□□□□□ -0.65
ITGB4-201ENST00000200181 CNBPP62633 177 aaKnown RBP10.98□□□□□ -0.65
ITGB4-201ENST00000200181 A0A1B0GU33 70 aa10.98□□□□□ -0.65
ITGB4-201ENST00000200181 CASC10Q5T4H9 136 aa10.98□□□□□ -0.65
ITGB4-201ENST00000200181 CAMK2N1Q7Z7J9 78 aa10.98□□□□□ -0.65
ITGB4-201ENST00000200181 ZFYVE26Q68DK2 2539 aa10.96□□□□□ -0.66
ITGB4-201ENST00000200181 Q75L30 129 aa10.95□□□□□ -0.66
ITGB4-201ENST00000200181 IGLV7-46A0A075B6I9 117 aa10.93□□□□□ -0.66
ITGB4-201ENST00000200181 PRAC1Q96KF2 57 aa10.93□□□□□ -0.66
ITGB4-201ENST00000200181 USP9XQ93008 2570 aaPredicted RBP10.92□□□□□ -0.66
ITGB4-201ENST00000200181 F8P00451 2351 aa10.92□□□□□ -0.66
ITGB4-201ENST00000200181 Q6ZSA8 131 aa10.9□□□□□ -0.66
ITGB4-201ENST00000200181 PIEZO1Q92508 2521 aa10.9□□□□□ -0.66
ITGB4-201ENST00000200181 HRES1P13985 223 aa10.89□□□□□ -0.67
ITGB4-201ENST00000200181 FAM229BQ4G0N7 80 aa10.89□□□□□ -0.67
ITGB4-201ENST00000200181 KRTAP10-3P60369 221 aa10.89□□□□□ -0.67
ITGB4-201ENST00000200181 PKD1L2Q7Z442 2459 aa10.88□□□□□ -0.67
ITGB4-201ENST00000200181 Q5XG85 94 aa10.85□□□□□ -0.67
ITGB4-201ENST00000200181 SRCAPQ6ZRS2 3230 aa10.84□□□□□ -0.67
ITGB4-201ENST00000200181 LINC01558Q9Y6Z2 57 aa10.82□□□□□ -0.68
ITGB4-201ENST00000200181 A0A0A0MQY5 61 aa10.82□□□□□ -0.68
ITGB4-201ENST00000200181 SETD2Q9BYW2 2564 aaPredicted RBP10.81□□□□□ -0.68
ITGB4-201ENST00000200181 DMAC1Q96GE9 116 aa10.8□□□□□ -0.68
ITGB4-201ENST00000200181 CSAG1Q6PB30 78 aa10.79□□□□□ -0.68
ITGB4-201ENST00000200181 Q8N9P0 234 aaPredicted RBP10.77□□□□□ -0.69
ITGB4-201ENST00000200181 PCSK5Q92824 1860 aa10.76□□□□□ -0.69
ITGB4-201ENST00000200181 A0A096LNT2 108 aa10.74□□□□□ -0.69
ITGB4-201ENST00000200181 FP248Q71RG6 208 aaPredicted RBP10.73□□□□□ -0.69
ITGB4-201ENST00000200181 S4R3F8 94 aa10.72□□□□□ -0.69
ITGB4-201ENST00000200181 M0R2T5 61 aa10.72□□□□□ -0.69
ITGB4-201ENST00000200181 MMP24-AS1A0A0U1RRL7 71 aa10.71□□□□□ -0.69
ITGB4-201ENST00000200181 ZCCHC13Q8WW36 166 aaKnown RBP10.71□□□□□ -0.69
ITGB4-201ENST00000200181 CYSTM1Q9H1C7 97 aa10.7□□□□□ -0.7
ITGB4-201ENST00000200181 Q5VV11 94 aa10.7□□□□□ -0.7
ITGB4-201ENST00000200181 USP9YO00507 2555 aaPredicted RBP10.68□□□□□ -0.7
ITGB4-201ENST00000200181 SPINK7P58062 85 aa10.68□□□□□ -0.7
ITGB4-201ENST00000200181 TNP2Q05952 138 aa10.66□□□□□ -0.7
ITGB4-201ENST00000200181 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.66□□□□□ -0.7
ITGB4-201ENST00000200181 ACANP16112 2415 aa10.65□□□□□ -0.7
ITGB4-201ENST00000200181 CR1P17927 2039 aa10.62□□□□□ -0.71
ITGB4-201ENST00000200181 Q5W150 140 aa10.61□□□□□ -0.71
ITGB4-201ENST00000200181 ANKRD17O75179 2603 aaKnown RBP10.59□□□□□ -0.71
ITGB4-201ENST00000200181 WDR87Q6ZQQ6 2873 aa10.59□□□□□ -0.71
ITGB4-201ENST00000200181 MTORP42345 2549 aa10.58□□□□□ -0.72
ITGB4-201ENST00000200181 R4GN34 69 aa10.56□□□□□ -0.72
ITGB4-201ENST00000200181 ANKRD11Q6UB99 2663 aaPredicted RBP10.55□□□□□ -0.72
ITGB4-201ENST00000200181 ROMO1P60602 79 aa10.53□□□□□ -0.72
ITGB4-201ENST00000200181 PLAC8Q9NZF1 115 aa10.5□□□□□ -0.73
ITGB4-201ENST00000200181 CHD8Q9HCK8 2581 aa10.49□□□□□ -0.73
ITGB4-201ENST00000200181 RPL37P61927 97 aaKnown RBP10.49□□□□□ -0.73
ITGB4-201ENST00000200181 LINC00472Q9H8W2 130 aa10.49□□□□□ -0.73
ITGB4-201ENST00000200181 SPRR1AP35321 89 aa10.48□□□□□ -0.73
ITGB4-201ENST00000200181 OXTP01178 125 aa10.46□□□□□ -0.74
ITGB4-201ENST00000200181 Q8NDZ9 215 aa10.46□□□□□ -0.74
ITGB4-201ENST00000200181 KRTAP1-3Q8IUG1 177 aa10.45□□□□□ -0.74
ITGB4-201ENST00000200181 CEP295Q9C0D2 2601 aa10.44□□□□□ -0.74
ITGB4-201ENST00000200181 POLQO75417 2590 aa10.43□□□□□ -0.74
ITGB4-201ENST00000200181 SPRR1BP22528 89 aa10.42□□□□□ -0.74
ITGB4-201ENST00000200181 KRTAP1-1Q07627 177 aa10.41□□□□□ -0.74
ITGB4-201ENST00000200181 H1FX-AS1Q4G0G2 97 aa10.41□□□□□ -0.74
ITGB4-201ENST00000200181 M0QZ58 72 aa10.37□□□□□ -0.75
ITGB4-201ENST00000200181 GOLGB1Q14789 3259 aaKnown RBP10.36□□□□□ -0.75
ITGB4-201ENST00000200181 SPTBN4Q9H254 2564 aa10.34□□□□□ -0.75
ITGB4-201ENST00000200181 SEC61BP60468 96 aaKnown RBP10.34□□□□□ -0.75
ITGB4-201ENST00000200181 KRTAP26-1Q6PEX3 210 aa10.34□□□□□ -0.75
ITGB4-201ENST00000200181 ASB16-AS1Q495Z4 193 aa10.28□□□□□ -0.76
ITGB4-201ENST00000200181 SPATA8Q6RVD6 105 aa10.28□□□□□ -0.76
ITGB4-201ENST00000200181 KRTAP16-1A8MUX0 517 aa10.27□□□□□ -0.77
ITGB4-201ENST00000200181 ADM2Q7Z4H4 148 aa10.23□□□□□ -0.77
ITGB4-201ENST00000200181 PLAC4Q8WY50 150 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms