RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 Klk4Q9Z0M1 255 aa12.85□□□□□ -0.35
Clcn3-203ENSMUST00000093490 Igkv4-80A0A075B5L7 116 aa12.84□□□□□ -0.35
Clcn3-203ENSMUST00000093490 PigyP0C1P0 71 aa12.84□□□□□ -0.35
Clcn3-203ENSMUST00000093490 Olfr1373Q7TQT6 311 aa12.84□□□□□ -0.35
Clcn3-203ENSMUST00000093490 Dmrtc2Q8CGW9 370 aa12.84□□□□□ -0.35
Clcn3-203ENSMUST00000093490 Vdac2Q60930 295 aaKnown RBP12.84□□□□□ -0.35
Clcn3-203ENSMUST00000093490 Gm16503Q8C6M9 103 aa12.84□□□□□ -0.35
Clcn3-203ENSMUST00000093490 4931428L18RikQ9D4S9 127 aa12.84□□□□□ -0.35
Clcn3-203ENSMUST00000093490 Ccl17F6R5P4 103 aa12.84□□□□□ -0.35
Clcn3-203ENSMUST00000093490 Thy1P01831 162 aa12.84□□□□□ -0.35
Clcn3-203ENSMUST00000093490 Defa-rs12P50716 91 aa12.84□□□□□ -0.35
Clcn3-203ENSMUST00000093490 SlpiP97430 131 aa12.84□□□□□ -0.35
Clcn3-203ENSMUST00000093490 Tex48Q9DA81 110 aa12.84□□□□□ -0.35
Clcn3-203ENSMUST00000093490 CklfQ9DAS1 152 aa12.84□□□□□ -0.35
Clcn3-203ENSMUST00000093490 Ccl12Q62401 104 aa12.84□□□□□ -0.35
Clcn3-203ENSMUST00000093490 Olfr1402Q8VET1 320 aa12.84□□□□□ -0.35
Clcn3-203ENSMUST00000093490 Gm37388A0A0A6YY46 143 aa12.84□□□□□ -0.35
Clcn3-203ENSMUST00000093490 Ca5aP23589 299 aa12.84□□□□□ -0.35
Clcn3-203ENSMUST00000093490 Gm7489Q3UT34 171 aa12.84□□□□□ -0.35
Clcn3-203ENSMUST00000093490 Hbb-bsA8DUK4 147 aa12.83□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Hbb-b1P02088 147 aa12.83□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Il1f10Q8R459 152 aa12.83□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Trav14n-3A0A075B645 120 aa12.83□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Hint1P70349 126 aaKnown RBP12.83□□□□□ -0.36
Clcn3-203ENSMUST00000093490 TtrP07309 147 aa12.83□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Phpt1Q9DAK9 124 aa12.83□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Ahctf1Q8CJF7 2243 aaKnown RBP12.83□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Trbv3A0A0A6YYE2 117 aa12.83□□□□□ -0.36
Clcn3-203ENSMUST00000093490 4930596D02RikQ3V0H9 216 aa12.83□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Nit2Q9JHW2 276 aa12.83□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Defa2P28309 93 aa12.82□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Cd69P37217 199 aa12.82□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Pygo1Q9D0P5 417 aa12.82□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Plxna4Q80UG2 1893 aa12.82□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Ighv5-8A0A075B676 92 aa12.82□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Trav6-4A0A075B6B4 115 aa12.82□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Gm29289A0A087WPY7 166 aa12.82□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Gm4064A0A087WR82 380 aa12.82□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Gm10352B2RWR6 380 aa12.82□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Gm21693J3QK27 380 aa12.82□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Rbmy1a1O35698 380 aa12.82□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Nhlrc1Q8BR37 401 aa12.82□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Spata45Q9CVW4 97 aa12.82□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Tpsg1Q9QUL7 311 aa12.82□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Trdv5A0A075B661 115 aa12.82□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Itgb1bp1O35671 200 aa12.82□□□□□ -0.36
Clcn3-203ENSMUST00000093490 TprF6ZDS4 2431 aaKnown RBP12.82□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Ube2e1P52482 193 aa12.82□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Gm904Q3V2L5 102 aa12.82□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Obox1Q9D350 204 aa12.82□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Tmem141A2AJB2 108 aa12.81□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Gm6793B2RXM2 351 aa12.81□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Tm4sf20Q9CQY8 226 aa12.81□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Mrpl53Q9D1H8 118 aaKnown RBP12.81□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Gm45213A0A0U1RNZ6 101 aa12.81□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Foxl2O88470 375 aa12.81□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Spaca3Q9D9X8 221 aa12.81□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Kif26bQ7TNC6 2112 aa12.81□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Trbv13-3A0A0B4J1H2 113 aa12.81□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Eid2bE9Q2Y0 151 aa12.81□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Cdk2ap2Q9CPY4 127 aa12.81□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Gm27027S4R1M6 97 aa12.81□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Ckap5A2AGT5 2032 aaKnown RBP12.8□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Olfr748E9Q9Z0 307 aa12.8□□□□□ -0.36
Clcn3-203ENSMUST00000093490 F11rO88792 300 aa12.8□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Ighv8-2A0A0A6YW58 119 aa12.8□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Rchy1Q9CR50 261 aa12.8□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Higd1aQ9JLR9 95 aa12.8□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Ovol1Q9WTJ2 267 aa12.8□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Pfn1P62962 140 aa12.8□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Mgst3Q9CPU4 153 aa12.8□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Gm2174F6ZVF2 133 aa12.8□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Gm37988J3QM41 62 aa12.8□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Gm94Q3V2D2 93 aa12.8□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Gm12253Q5NC48 229 aa12.8□□□□□ -0.36
Clcn3-203ENSMUST00000093490 GlrxQ9QUH0 107 aa12.8□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Hist1h1tQ07133 208 aa12.79□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Olfr745Q7TRL9 328 aa12.79□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Sap30O88574 220 aa12.79□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Cox7a2lQ61387 111 aa12.79□□□□□ -0.36
Clcn3-203ENSMUST00000093490 1700001C19RikQ8K168 210 aa12.79□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Vwa8Q8CC88 1905 aa12.79□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Gm4744D3Z3S5 154 aa12.79□□□□□ -0.36
Clcn3-203ENSMUST00000093490 9430097D07RikQ8BS47 195 aa12.79□□□□□ -0.36
Clcn3-203ENSMUST00000093490 ArtnQ9Z0L2 224 aa12.79□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Tex54G3UW99 86 aa12.79□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Defb3Q9WTL0 63 aa12.79□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Igkv4-63A0A0G2JFU6 117 aa12.78□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Igkv13-84A0A140T8N3 115 aa12.78□□□□□ -0.36
Clcn3-203ENSMUST00000093490 AcacaQ5SWU9 2345 aa12.78□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Heatr1G3X9B1 2143 aaKnown RBP12.78□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Lyzl4Q9D925 145 aa12.78□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Pgpep1Q9ESW8 209 aa12.78□□□□□ -0.36
Clcn3-203ENSMUST00000093490 LoxP28301 411 aa12.78□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Lmo1Q924W9 156 aa12.78□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Mapk1ip1Q9D7G9 263 aa12.78□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Plac1Q9JI83 173 aa12.78□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Trav8-1A0A075B641 109 aa12.78□□□□□ -0.36
Clcn3-203ENSMUST00000093490 Pcp4P63054 62 aa12.78□□□□□ -0.36
Clcn3-203ENSMUST00000093490 MycbQ6P8Z1 170 aa12.78□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 39.7 ms