RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Znf146Q8BQN6 292 aa12.96□□□□□ -0.33
Trim28-201ENSMUST00000005705 Ndufs8Q8K3J1 212 aa12.96□□□□□ -0.33
Trim28-201ENSMUST00000005705 Leprotl1Q9CQ74 131 aa12.96□□□□□ -0.33
Trim28-201ENSMUST00000005705 Wnk1P83741 2377 aa12.96□□□□□ -0.33
Trim28-201ENSMUST00000005705 Ighv1-39A0A075B5V5 117 aa12.96□□□□□ -0.33
Trim28-201ENSMUST00000005705 Crip1P63254 77 aa12.96□□□□□ -0.33
Trim28-201ENSMUST00000005705 Znf691Q3TDE8 283 aa12.96□□□□□ -0.33
Trim28-201ENSMUST00000005705 PdfS4R2K0 231 aa12.96□□□□□ -0.33
Trim28-201ENSMUST00000005705 TfpiO54819 306 aa12.96□□□□□ -0.34
Trim28-201ENSMUST00000005705 Tac3P55099 116 aa12.96□□□□□ -0.34
Trim28-201ENSMUST00000005705 NotoQ5TIS6 240 aa12.96□□□□□ -0.34
Trim28-201ENSMUST00000005705 Ociad2Q9D8W7 154 aa12.96□□□□□ -0.34
Trim28-201ENSMUST00000005705 Ifna12Q80SS5 189 aa12.95□□□□□ -0.34
Trim28-201ENSMUST00000005705 Olfr477Q8VGI6 310 aa12.95□□□□□ -0.34
Trim28-201ENSMUST00000005705 Tmem52Q9D702 196 aa12.95□□□□□ -0.34
Trim28-201ENSMUST00000005705 Tomm40Q9QYA2 361 aa12.95□□□□□ -0.34
Trim28-201ENSMUST00000005705 Pf4Q9Z126 105 aa12.95□□□□□ -0.34
Trim28-201ENSMUST00000005705 Olfr364-ps1A0A140T8Q2 307 aa12.95□□□□□ -0.34
Trim28-201ENSMUST00000005705 Vma21-psA0A140T8R2 101 aa12.95□□□□□ -0.34
Trim28-201ENSMUST00000005705 Ccdc71lE9Q4T4 218 aa12.95□□□□□ -0.34
Trim28-201ENSMUST00000005705 P01793 123 aa12.95□□□□□ -0.34
Trim28-201ENSMUST00000005705 P04940 107 aa12.95□□□□□ -0.34
Trim28-201ENSMUST00000005705 P04941 107 aa12.95□□□□□ -0.34
Trim28-201ENSMUST00000005705 Fam222bQ6P539 562 aa12.95□□□□□ -0.34
Trim28-201ENSMUST00000005705 Gatad1Q920S3 266 aa12.95□□□□□ -0.34
Trim28-201ENSMUST00000005705 Loxl2P58022 776 aa12.94□□□□□ -0.34
Trim28-201ENSMUST00000005705 Vmn1r195Q5SVD6 316 aa12.94□□□□□ -0.34
Trim28-201ENSMUST00000005705 Rpl24Q8BP67 157 aaKnown RBP12.94□□□□□ -0.34
Trim28-201ENSMUST00000005705 Q9CR34 168 aa12.94□□□□□ -0.34
Trim28-201ENSMUST00000005705 Atp5iQ06185 71 aaKnown RBP12.94□□□□□ -0.34
Trim28-201ENSMUST00000005705 Zfp92Q62396 488 aa12.94□□□□□ -0.34
Trim28-201ENSMUST00000005705 Olfr810Q8VFH9 312 aa12.94□□□□□ -0.34
Trim28-201ENSMUST00000005705 Tmed6Q9CQG0 239 aa12.94□□□□□ -0.34
Trim28-201ENSMUST00000005705 Olfr748E9Q9Z0 307 aa12.94□□□□□ -0.34
Trim28-201ENSMUST00000005705 Defa9P50707 93 aa12.94□□□□□ -0.34
Trim28-201ENSMUST00000005705 RprmlQ3URD2 117 aa12.94□□□□□ -0.34
Trim28-201ENSMUST00000005705 Bsph1Q3UW26 133 aa12.94□□□□□ -0.34
Trim28-201ENSMUST00000005705 Olfr149Q60888 311 aa12.94□□□□□ -0.34
Trim28-201ENSMUST00000005705 Scgb1b19F6WYW0 93 aa12.93□□□□□ -0.34
Trim28-201ENSMUST00000005705 Ca1P13634 261 aa12.93□□□□□ -0.34
Trim28-201ENSMUST00000005705 NpyP57774 97 aa12.93□□□□□ -0.34
Trim28-201ENSMUST00000005705 Map6d1Q14BB9 191 aa12.93□□□□□ -0.34
Trim28-201ENSMUST00000005705 Tmem40Q4FJU9 225 aa12.93□□□□□ -0.34
Trim28-201ENSMUST00000005705 Ppp1r3cQ7TMB3 317 aa12.93□□□□□ -0.34
Trim28-201ENSMUST00000005705 Zmat4Q8BZ94 229 aa12.93□□□□□ -0.34
Trim28-201ENSMUST00000005705 F2rl1P55086 399 aa12.93□□□□□ -0.34
Trim28-201ENSMUST00000005705 BtcQ05928 177 aa12.93□□□□□ -0.34
Trim28-201ENSMUST00000005705 Spem1Q5F289 310 aa12.93□□□□□ -0.34
Trim28-201ENSMUST00000005705 Rnase2aQ8K196 155 aa12.93□□□□□ -0.34
Trim28-201ENSMUST00000005705 Zfp983E9PUT0 460 aa12.92□□□□□ -0.34
Trim28-201ENSMUST00000005705 Igfbpl1Q80W15 270 aa12.92□□□□□ -0.34
Trim28-201ENSMUST00000005705 Cd209gD3Z5D4 194 aa12.92□□□□□ -0.34
Trim28-201ENSMUST00000005705 Gm3512L7N206 146 aa12.92□□□□□ -0.34
Trim28-201ENSMUST00000005705 Fbln7Q501P1 440 aa12.92□□□□□ -0.34
Trim28-201ENSMUST00000005705 Snrnp40Q6PE01 358 aa12.92□□□□□ -0.34
Trim28-201ENSMUST00000005705 Olfr1336Q8VGH5 314 aa12.92□□□□□ -0.34
Trim28-201ENSMUST00000005705 Gm5426J3QNM7 103 aa12.92□□□□□ -0.34
Trim28-201ENSMUST00000005705 Chac2Q9CQG1 178 aa12.92□□□□□ -0.34
Trim28-201ENSMUST00000005705 Gm15056F6ZR08 88 aa12.91□□□□□ -0.34
Trim28-201ENSMUST00000005705 Klk15Q8CGR4 254 aa12.91□□□□□ -0.34
Trim28-201ENSMUST00000005705 Ighv9-1A0A0B4J1P3 117 aa12.91□□□□□ -0.34
Trim28-201ENSMUST00000005705 Igkv14-130A0A0G2JF45 117 aa12.91□□□□□ -0.34
Trim28-201ENSMUST00000005705 Hyls1Q9CXX0 307 aa12.91□□□□□ -0.34
Trim28-201ENSMUST00000005705 Nav3Q80TN7 2359 aa12.91□□□□□ -0.34
Trim28-201ENSMUST00000005705 Gm10073E9Q3T0 114 aa12.9□□□□□ -0.34
Trim28-201ENSMUST00000005705 BokO35425 213 aa12.9□□□□□ -0.34
Trim28-201ENSMUST00000005705 Zg16Q8K0C5 167 aa12.9□□□□□ -0.34
Trim28-201ENSMUST00000005705 Olfr1256Q8VGP1 306 aa12.9□□□□□ -0.34
Trim28-201ENSMUST00000005705 Gm9242J3QNY1 357 aa12.9□□□□□ -0.34
Trim28-201ENSMUST00000005705 Cox7a2P48771 83 aa12.9□□□□□ -0.34
Trim28-201ENSMUST00000005705 Nbeal1E9PYP2 2688 aa12.9□□□□□ -0.34
Trim28-201ENSMUST00000005705 Tcrg-C2A0A075B5Z2 167 aa12.9□□□□□ -0.34
Trim28-201ENSMUST00000005705 Gm10036E9PYL9 178 aaKnown RBP12.9□□□□□ -0.34
Trim28-201ENSMUST00000005705 P01853 167 aa12.9□□□□□ -0.34
Trim28-201ENSMUST00000005705 Ifi27Q8C6G0 260 aa12.9□□□□□ -0.34
Trim28-201ENSMUST00000005705 Tmem189Q99LQ7 271 aa12.9□□□□□ -0.34
Trim28-201ENSMUST00000005705 TracA0A075B662 137 aa12.89□□□□□ -0.35
Trim28-201ENSMUST00000005705 Gm6096D3YTY6 151 aa12.89□□□□□ -0.35
Trim28-201ENSMUST00000005705 Vmn1r60G3UY47 300 aa12.89□□□□□ -0.35
Trim28-201ENSMUST00000005705 SrstQ06666 185 aa12.89□□□□□ -0.35
Trim28-201ENSMUST00000005705 ElaneQ3UP87 265 aa12.89□□□□□ -0.35
Trim28-201ENSMUST00000005705 Psg25Q497W1 475 aa12.89□□□□□ -0.35
Trim28-201ENSMUST00000005705 Tctex1d1Q9D5I4 173 aa12.89□□□□□ -0.35
Trim28-201ENSMUST00000005705 Myo9aQ8C170 2542 aa12.89□□□□□ -0.35
Trim28-201ENSMUST00000005705 Gm21060J3KMU4 56 aa12.89□□□□□ -0.35
Trim28-201ENSMUST00000005705 P04942 107 aa12.89□□□□□ -0.35
Trim28-201ENSMUST00000005705 Adrb3P25962 400 aa12.89□□□□□ -0.35
Trim28-201ENSMUST00000005705 Olfr150Q60895 312 aa12.89□□□□□ -0.35
Trim28-201ENSMUST00000005705 Tmem97Q8VD00 176 aa12.89□□□□□ -0.35
Trim28-201ENSMUST00000005705 Lyzl1Q9CPX3 148 aa12.89□□□□□ -0.35
Trim28-201ENSMUST00000005705 GlmpQ9JHJ3 404 aa12.89□□□□□ -0.35
Trim28-201ENSMUST00000005705 Ramp1Q9WTJ5 148 aa12.89□□□□□ -0.35
Trim28-201ENSMUST00000005705 Arid1bE9Q4N7 2244 aa12.89□□□□□ -0.35
Trim28-201ENSMUST00000005705 Tmem241Q3UME2 297 aa12.88□□□□□ -0.35
Trim28-201ENSMUST00000005705 Olfr1437Q7TQR7 312 aa12.88□□□□□ -0.35
Trim28-201ENSMUST00000005705 GaptQ8CB93 157 aa12.88□□□□□ -0.35
Trim28-201ENSMUST00000005705 ChodlQ9CXM0 273 aa12.88□□□□□ -0.35
Trim28-201ENSMUST00000005705 Gm26920S4R2A5 56 aa12.88□□□□□ -0.35
Trim28-201ENSMUST00000005705 Olfr1192-ps1A0A1L1SRD7 309 aa12.88□□□□□ -0.35
Trim28-201ENSMUST00000005705 B1ARW8 110 aa12.88□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 82.6 ms