RNA–Protein interactions for RNA: ENST00000640939.1

GRAMD1B-217, Transcript of GRAM domain containing 1B, humanhuman

TSL 5 BASIC

Gene GRAMD1B, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-217ENST00000640939 HIST1H2BCP62807 126 aa13.55□□□□□ -0.24
GRAMD1B-217ENST00000640939 HIST2H2BEQ16778 126 aa13.55□□□□□ -0.24
GRAMD1B-217ENST00000640939 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.55□□□□□ -0.24
GRAMD1B-217ENST00000640939 Q8NDZ9 215 aa13.55□□□□□ -0.24
GRAMD1B-217ENST00000640939 HIST1H2BHQ93079 126 aa13.55□□□□□ -0.24
GRAMD1B-217ENST00000640939 HIST1H2BNQ99877 126 aa13.55□□□□□ -0.24
GRAMD1B-217ENST00000640939 HIST1H2BMQ99879 126 aa13.55□□□□□ -0.24
GRAMD1B-217ENST00000640939 IGKV2-28A0A075B6P5 120 aa13.54□□□□□ -0.24
GRAMD1B-217ENST00000640939 IGKV2D-28P01615 120 aa13.54□□□□□ -0.24
GRAMD1B-217ENST00000640939 KRTAP1-4P0C5Y4 121 aa13.54□□□□□ -0.24
GRAMD1B-217ENST00000640939 SMIM13P0DJ93 91 aa13.53□□□□□ -0.24
GRAMD1B-217ENST00000640939 PLNP26678 52 aa13.53□□□□□ -0.24
GRAMD1B-217ENST00000640939 RPL24P83731 157 aaKnown RBP13.53□□□□□ -0.24
GRAMD1B-217ENST00000640939 NDUFA12Q9UI09 145 aa13.53□□□□□ -0.24
GRAMD1B-217ENST00000640939 DPM2O94777 84 aa13.52□□□□□ -0.25
GRAMD1B-217ENST00000640939 TSPEAR-AS2P59090 65 aa13.52□□□□□ -0.25
GRAMD1B-217ENST00000640939 MEIG1Q5JSS6 88 aa13.52□□□□□ -0.25
GRAMD1B-217ENST00000640939 MAP1LC3CQ9BXW4 147 aa13.51□□□□□ -0.25
GRAMD1B-217ENST00000640939 LEPROTO15243 131 aa13.5□□□□□ -0.25
GRAMD1B-217ENST00000640939 IGKCP01834 107 aa13.5□□□□□ -0.25
GRAMD1B-217ENST00000640939 RPL28P46779 137 aaKnown RBP13.5□□□□□ -0.25
GRAMD1B-217ENST00000640939 HERV-K104P63124 156 aa13.5□□□□□ -0.25
GRAMD1B-217ENST00000640939 ATP6V1G1O75348 118 aa13.49□□□□□ -0.25
GRAMD1B-217ENST00000640939 IGLV1-50A0A075B6I6 118 aa13.48□□□□□ -0.25
GRAMD1B-217ENST00000640939 MYMXA0A1B0GTQ4 84 aa13.48□□□□□ -0.25
GRAMD1B-217ENST00000640939 PLEKHB2Q96CS7 222 aa13.48□□□□□ -0.25
GRAMD1B-217ENST00000640939 MIR7-3HGQ8N6C7 128 aa13.47□□□□□ -0.25
GRAMD1B-217ENST00000640939 TMEM238C9JI98 176 aa13.46□□□□□ -0.25
GRAMD1B-217ENST00000640939 UBE2AP49459 152 aa13.46□□□□□ -0.25
GRAMD1B-217ENST00000640939 HERVK_113P61574 105 aa13.46□□□□□ -0.25
GRAMD1B-217ENST00000640939 J3QQQ9 107 aa13.45□□□□□ -0.26
GRAMD1B-217ENST00000640939 KRTAP13-1Q8IUC0 172 aa13.44□□□□□ -0.26
GRAMD1B-217ENST00000640939 SYS1-DBNDD2H3BUS1 97 aa13.43□□□□□ -0.26
GRAMD1B-217ENST00000640939 BOD1L2Q8IYS8 172 aa13.43□□□□□ -0.26
GRAMD1B-217ENST00000640939 TMEM126AQ9H061 195 aa13.43□□□□□ -0.26
GRAMD1B-217ENST00000640939 LINC00587B1AMM8 73 aa13.42□□□□□ -0.26
GRAMD1B-217ENST00000640939 UBR4Q5T4S7 5183 aa13.41□□□□□ -0.26
GRAMD1B-217ENST00000640939 M0R378 163 aa13.41□□□□□ -0.26
GRAMD1B-217ENST00000640939 LGALS3P17931 250 aaKnown RBP13.41□□□□□ -0.26
GRAMD1B-217ENST00000640939 PRLHP81277 87 aa13.41□□□□□ -0.26
GRAMD1B-217ENST00000640939 FAM19A1Q7Z5A9 133 aa13.41□□□□□ -0.26
GRAMD1B-217ENST00000640939 DAND5Q8N907 189 aa13.41□□□□□ -0.26
GRAMD1B-217ENST00000640939 NCR3O14931 201 aa13.4□□□□□ -0.26
GRAMD1B-217ENST00000640939 RPL13AP40429 203 aaKnown RBP13.38□□□□□ -0.27
GRAMD1B-217ENST00000640939 NMUP48645 174 aa13.38□□□□□ -0.27
GRAMD1B-217ENST00000640939 ANAPC11Q9NYG5 84 aa13.36□□□□□ -0.27
GRAMD1B-217ENST00000640939 E9PLD3 99 aa13.35□□□□□ -0.27
GRAMD1B-217ENST00000640939 COA6Q5JTJ3 125 aaKnown RBP13.35□□□□□ -0.27
GRAMD1B-217ENST00000640939 LINC01545Q5VT33 79 aa13.35□□□□□ -0.27
GRAMD1B-217ENST00000640939 PET117Q6UWS5 81 aa13.35□□□□□ -0.27
GRAMD1B-217ENST00000640939 A0A087X002 238 aa13.34□□□□□ -0.27
GRAMD1B-217ENST00000640939 C3orf79P0CE67 100 aa13.33□□□□□ -0.28
GRAMD1B-217ENST00000640939 IGKV2D-26A0A0A0MRZ7 120 aa13.31□□□□□ -0.28
GRAMD1B-217ENST00000640939 A0A0J9YXY3 114 aa13.31□□□□□ -0.28
GRAMD1B-217ENST00000640939 KRTDAPP60985 99 aa13.31□□□□□ -0.28
GRAMD1B-217ENST00000640939 LRP2P98164 4655 aa13.31□□□□□ -0.28
GRAMD1B-217ENST00000640939 LOC107984156A0A0G2JMH3 177 aa13.3□□□□□ -0.28
GRAMD1B-217ENST00000640939 CRYGAP11844 174 aa13.3□□□□□ -0.28
GRAMD1B-217ENST00000640939 ARL17AQ8IVW1 177 aa13.3□□□□□ -0.28
GRAMD1B-217ENST00000640939 TRBV10-3A0A0K0K1G6 114 aa13.29□□□□□ -0.28
GRAMD1B-217ENST00000640939 PRYO14603 147 aa13.29□□□□□ -0.28
GRAMD1B-217ENST00000640939 NPC2P61916 151 aa13.28□□□□□ -0.28
GRAMD1B-217ENST00000640939 ADAMTSL4-AS1Q5T5F5 129 aa13.28□□□□□ -0.28
GRAMD1B-217ENST00000640939 MIEN1Q9BRT3 115 aa13.28□□□□□ -0.28
GRAMD1B-217ENST00000640939 HIGD2AQ9BW72 106 aa13.28□□□□□ -0.28
GRAMD1B-217ENST00000640939 KCNQ1DNQ9H478 68 aa13.27□□□□□ -0.29
GRAMD1B-217ENST00000640939 TYMSOSQ8TAI1 123 aa13.26□□□□□ -0.29
GRAMD1B-217ENST00000640939 EIF4EBP3O60516 100 aaPredicted RBP13.25□□□□□ -0.29
GRAMD1B-217ENST00000640939 KRTAP13-2Q52LG2 175 aa13.25□□□□□ -0.29
GRAMD1B-217ENST00000640939 SOSTDC1Q6X4U4 206 aa13.25□□□□□ -0.29
GRAMD1B-217ENST00000640939 S100A1P23297 94 aa13.24□□□□□ -0.29
GRAMD1B-217ENST00000640939 FAM229BQ4G0N7 80 aa13.24□□□□□ -0.29
GRAMD1B-217ENST00000640939 TRBV10-2A0A0K0K1G8 114 aa13.23□□□□□ -0.29
GRAMD1B-217ENST00000640939 SPRR1AP35321 89 aa13.23□□□□□ -0.29
GRAMD1B-217ENST00000640939 TTTY13Q9BZ97 58 aa13.23□□□□□ -0.29
GRAMD1B-217ENST00000640939 SPANXB1Q9NS25 103 aaPredicted RBP13.23□□□□□ -0.29
GRAMD1B-217ENST00000640939 DDTP30046 118 aa13.22□□□□□ -0.29
GRAMD1B-217ENST00000640939 LINC00337Q8N6G1 96 aa13.22□□□□□ -0.29
GRAMD1B-217ENST00000640939 ETDCA0A1B0GVM5 59 aa13.21□□□□□ -0.29
GRAMD1B-217ENST00000640939 ZNF815PA8K554 130 aa13.21□□□□□ -0.29
GRAMD1B-217ENST00000640939 KRTAP4-16G5E9R7 235 aaPredicted RBP13.21□□□□□ -0.29
GRAMD1B-217ENST00000640939 TSPAN13O95857 204 aa13.21□□□□□ -0.29
GRAMD1B-217ENST00000640939 NDUFC2O95298 119 aa13.2□□□□□ -0.3
GRAMD1B-217ENST00000640939 LITAFQ99732 161 aa13.2□□□□□ -0.3
GRAMD1B-217ENST00000640939 C20orf202A1L168 122 aa13.19□□□□□ -0.3
GRAMD1B-217ENST00000640939 S100A12P80511 92 aa13.19□□□□□ -0.3
GRAMD1B-217ENST00000640939 S100A7L2Q5SY68 101 aa13.18□□□□□ -0.3
GRAMD1B-217ENST00000640939 ATOH7Q8N100 152 aa13.18□□□□□ -0.3
GRAMD1B-217ENST00000640939 SPRR4Q96PI1 79 aa13.17□□□□□ -0.3
GRAMD1B-217ENST00000640939 LPAP08519 4548 aa13.17□□□□□ -0.3
GRAMD1B-217ENST00000640939 TIMM17BO60830 172 aa13.16□□□□□ -0.3
GRAMD1B-217ENST00000640939 IGLV6-57P01721 117 aa13.16□□□□□ -0.3
GRAMD1B-217ENST00000640939 LINC00308Q8TCZ7 52 aa13.16□□□□□ -0.3
GRAMD1B-217ENST00000640939 SMCR5Q8TEV8 140 aa13.16□□□□□ -0.3
GRAMD1B-217ENST00000640939 B5MCH6 92 aa13.15□□□□□ -0.3
GRAMD1B-217ENST00000640939 ANKRD39Q53RE8 183 aa13.15□□□□□ -0.3
GRAMD1B-217ENST00000640939 C3orf22Q8N5N4 141 aa13.14□□□□□ -0.31
GRAMD1B-217ENST00000640939 HIST3H2BBQ8N257 126 aa13.13□□□□□ -0.31
GRAMD1B-217ENST00000640939 ZNF706Q9Y5V0 76 aaPredicted RBP13.13□□□□□ -0.31
GRAMD1B-217ENST00000640939 PRR4Q16378 134 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms