RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 H0YGX0 51 aa1.61□□□□□ -2.15
CNOT1-223ENST00000628857 DEFB114Q30KQ6 69 aa1.61□□□□□ -2.15
CNOT1-223ENST00000628857 SPATA8Q6RVD6 105 aa1.61□□□□□ -2.15
CNOT1-223ENST00000628857 Q6ZTI0 123 aa1.61□□□□□ -2.15
CNOT1-223ENST00000628857 ZNF625Q96I27 306 aaPredicted RBP1.61□□□□□ -2.15
CNOT1-223ENST00000628857 SPRR4Q96PI1 79 aa1.61□□□□□ -2.15
CNOT1-223ENST00000628857 PSORS1C2Q9UIG4 136 aa1.61□□□□□ -2.15
CNOT1-223ENST00000628857 HIVEP2P31629 2446 aa1.6□□□□□ -2.15
CNOT1-223ENST00000628857 IGKV2-40A0A087WW87 121 aaPredicted RBP1.6□□□□□ -2.15
CNOT1-223ENST00000628857 IGKV2D-40P01614 121 aaPredicted RBP1.6□□□□□ -2.15
CNOT1-223ENST00000628857 RPL37AP61513 92 aaKnown RBP1.6□□□□□ -2.15
CNOT1-223ENST00000628857 RPS27LQ71UM5 84 aaKnown RBP1.6□□□□□ -2.15
CNOT1-223ENST00000628857 COA5Q86WW8 74 aa1.6□□□□□ -2.15
CNOT1-223ENST00000628857 PRO2289Q9P1D8 64 aa1.6□□□□□ -2.15
CNOT1-223ENST00000628857 A0A087WTM6 91 aa1.59□□□□□ -2.15
CNOT1-223ENST00000628857 LOC110117498A0A087WWA1 95 aa1.59□□□□□ -2.15
CNOT1-223ENST00000628857 CPSF4LA6NMK7 179 aaKnown RBP1.59□□□□□ -2.15
CNOT1-223ENST00000628857 IAPPP10997 89 aa1.59□□□□□ -2.15
CNOT1-223ENST00000628857 TFF3Q07654 80 aa1.59□□□□□ -2.15
CNOT1-223ENST00000628857 TRGV2A0A075B6R0 118 aa1.58□□□□□ -2.16
CNOT1-223ENST00000628857 A0A1B0GU69 56 aa1.58□□□□□ -2.16
CNOT1-223ENST00000628857 ETDCA0A1B0GVM5 59 aa1.58□□□□□ -2.16
CNOT1-223ENST00000628857 IGKV2-29A2NJV5 120 aaPredicted RBP1.58□□□□□ -2.16
CNOT1-223ENST00000628857 NCR3O14931 201 aa1.58□□□□□ -2.16
CNOT1-223ENST00000628857 FXYD4P59646 89 aa1.58□□□□□ -2.16
CNOT1-223ENST00000628857 KRTAP13-2Q52LG2 175 aa1.58□□□□□ -2.16
CNOT1-223ENST00000628857 R4GN34 69 aa1.58□□□□□ -2.16
CNOT1-223ENST00000628857 CACNA1CQ13936 2221 aa1.57□□□□□ -2.16
CNOT1-223ENST00000628857 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.57□□□□□ -2.16
CNOT1-223ENST00000628857 TRGV1A0A0A0MS02 117 aa1.57□□□□□ -2.16
CNOT1-223ENST00000628857 NBDYA0A0U1RRE5 68 aa1.57□□□□□ -2.16
CNOT1-223ENST00000628857 LINC00959A0A1B0GUT2 108 aa1.57□□□□□ -2.16
CNOT1-223ENST00000628857 A0A1W2PNN7 141 aa1.57□□□□□ -2.16
CNOT1-223ENST00000628857 ACYP2P14621 99 aa1.57□□□□□ -2.16
CNOT1-223ENST00000628857 COX7BP24311 80 aa1.57□□□□□ -2.16
CNOT1-223ENST00000628857 DEFB132Q7Z7B7 95 aa1.57□□□□□ -2.16
CNOT1-223ENST00000628857 TTTY10Q9BZA0 68 aa1.57□□□□□ -2.16
CNOT1-223ENST00000628857 KCNQ1DNQ9H478 68 aa1.57□□□□□ -2.16
CNOT1-223ENST00000628857 SEC16AO15027 2179 aa1.57□□□□□ -2.16
CNOT1-223ENST00000628857 ZFHX2Q9C0A1 2572 aaPredicted RBP1.56□□□□□ -2.16
CNOT1-223ENST00000628857 IGKV4-1P06312 121 aa1.56□□□□□ -2.16
CNOT1-223ENST00000628857 C5orf56Q8N8D9 126 aa1.56□□□□□ -2.16
CNOT1-223ENST00000628857 ARHGAP5-AS1Q96IT6 56 aa1.56□□□□□ -2.16
CNOT1-223ENST00000628857 CCL26Q9Y258 94 aa1.56□□□□□ -2.16
CNOT1-223ENST00000628857 KMT2BQ9UMN6 2715 aaPredicted RBP1.56□□□□□ -2.16
CNOT1-223ENST00000628857 BRWD1Q9NSI6 2320 aa1.55□□□□□ -2.16
CNOT1-223ENST00000628857 A0A0G2JQZ4 141 aa1.55□□□□□ -2.16
CNOT1-223ENST00000628857 DEFB134Q4QY38 66 aa1.55□□□□□ -2.16
CNOT1-223ENST00000628857 Q96NJ1 140 aa1.55□□□□□ -2.16
CNOT1-223ENST00000628857 SMIM2Q9BVW6 85 aa1.55□□□□□ -2.16
CNOT1-223ENST00000628857 LINC00472Q9H8W2 130 aa1.55□□□□□ -2.16
CNOT1-223ENST00000628857 MED13LQ71F56 2210 aa1.55□□□□□ -2.16
CNOT1-223ENST00000628857 SSC5DA1L4H1 1573 aa1.55□□□□□ -2.16
CNOT1-223ENST00000628857 MRPL33O75394 65 aaKnown RBP1.54□□□□□ -2.16
CNOT1-223ENST00000628857 HRES1P13985 223 aa1.54□□□□□ -2.16
CNOT1-223ENST00000628857 C10orf55Q5SWW7 151 aa1.54□□□□□ -2.16
CNOT1-223ENST00000628857 PRR9Q5T870 116 aa1.54□□□□□ -2.16
CNOT1-223ENST00000628857 LINC00304Q8N9R0 145 aa1.54□□□□□ -2.16
CNOT1-223ENST00000628857 IGLV6-57P01721 117 aa1.53□□□□□ -2.16
CNOT1-223ENST00000628857 PRB1P04280 392 aa1.53□□□□□ -2.16
CNOT1-223ENST00000628857 COL4A2P08572 1712 aa1.53□□□□□ -2.16
CNOT1-223ENST00000628857 BPTFQ12830 3046 aa1.53□□□□□ -2.16
CNOT1-223ENST00000628857 Q6ZQY7 126 aa1.53□□□□□ -2.16
CNOT1-223ENST00000628857 LINC00308Q8TCZ7 52 aa1.53□□□□□ -2.16
CNOT1-223ENST00000628857 SPACA4Q8TDM5 124 aa1.53□□□□□ -2.16
CNOT1-223ENST00000628857 CNFNQ9BYD5 112 aa1.53□□□□□ -2.16
CNOT1-223ENST00000628857 F5P12259 2224 aa1.52□□□□□ -2.17
CNOT1-223ENST00000628857 NDUFA1O15239 70 aa1.52□□□□□ -2.17
CNOT1-223ENST00000628857 TPRXLQ17RH7 258 aa1.52□□□□□ -2.17
CNOT1-223ENST00000628857 LINC00158P58513 81 aa1.51□□□□□ -2.17
CNOT1-223ENST00000628857 LINC01590Q5TEZ4 76 aa1.51□□□□□ -2.17
CNOT1-223ENST00000628857 KRTAP5-7Q6L8G8 165 aa1.51□□□□□ -2.17
CNOT1-223ENST00000628857 SSBP3-AS1Q7Z2R9 100 aa1.51□□□□□ -2.17
CNOT1-223ENST00000628857 GPR179Q6PRD1 2367 aa1.51□□□□□ -2.17
CNOT1-223ENST00000628857 DEFB131BA0A096LNP1 70 aa1.5□□□□□ -2.17
CNOT1-223ENST00000628857 H3BRN7 92 aa1.5□□□□□ -2.17
CNOT1-223ENST00000628857 SMIM11BQ8TCY0 68 aa1.5□□□□□ -2.17
CNOT1-223ENST00000628857 CCL19Q99731 98 aa1.5□□□□□ -2.17
CNOT1-223ENST00000628857 URB1O60287 2271 aaKnown RBP1.49□□□□□ -2.17
CNOT1-223ENST00000628857 SPTY2D1-AS1A0A0U1RR47 76 aa1.49□□□□□ -2.17
CNOT1-223ENST00000628857 LOC730098B7Z3J9 87 aa1.49□□□□□ -2.17
CNOT1-223ENST00000628857 H3BSH0 61 aa1.49□□□□□ -2.17
CNOT1-223ENST00000628857 CRIP1P50238 77 aa1.49□□□□□ -2.17
CNOT1-223ENST00000628857 PRB3Q04118 309 aaPredicted RBP1.49□□□□□ -2.17
CNOT1-223ENST00000628857 RTTNQ86VV8 2226 aa1.49□□□□□ -2.17
CNOT1-223ENST00000628857 CADP27708 2225 aa1.48□□□□□ -2.17
CNOT1-223ENST00000628857 INE1O15225 51 aa1.48□□□□□ -2.17
CNOT1-223ENST00000628857 LY6G6CO95867 125 aa1.48□□□□□ -2.17
CNOT1-223ENST00000628857 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.48□□□□□ -2.17
CNOT1-223ENST00000628857 Q8IZM0 81 aa1.48□□□□□ -2.17
CNOT1-223ENST00000628857 ABCA1O95477 2261 aa1.48□□□□□ -2.17
CNOT1-223ENST00000628857 SORL1Q92673 2214 aa1.47□□□□□ -2.17
CNOT1-223ENST00000628857 Q6ZRX8 168 aa1.47□□□□□ -2.17
CNOT1-223ENST00000628857 CDKN2A-AS1Q9UH64 79 aa1.47□□□□□ -2.17
CNOT1-223ENST00000628857 SHANK1Q9Y566 2161 aa1.47□□□□□ -2.17
CNOT1-223ENST00000628857 G3V318 75 aa1.46□□□□□ -2.18
CNOT1-223ENST00000628857 M0R2N4 97 aa1.46□□□□□ -2.18
CNOT1-223ENST00000628857 ANGP03950 147 aaKnown RBP1.46□□□□□ -2.18
CNOT1-223ENST00000628857 TECTAO75443 2155 aa1.46□□□□□ -2.18
CNOT1-223ENST00000628857 PDE4DIPQ5VU43 2346 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms