RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 UBE2D1P51668 147 aa2.8□□□□□ -1.96
CUL3-216ENST00000617432 SRSF9Q13242 221 aaKnown RBP eCLIP2.8□□□□□ -1.96
CUL3-216ENST00000617432 C2orf66Q6UXQ4 117 aa2.8□□□□□ -1.96
CUL3-216ENST00000617432 Q6ZRP5 223 aa2.8□□□□□ -1.96
CUL3-216ENST00000617432 Q8N8P6 123 aa2.8□□□□□ -1.96
CUL3-216ENST00000617432 TNXBP22105 4242 aa2.79□□□□□ -1.96
CUL3-216ENST00000617432 IGLV9-49A0A0B4J1Y8 123 aa2.79□□□□□ -1.96
CUL3-216ENST00000617432 LOC107984640A0A0U1RRK4 108 aa2.79□□□□□ -1.96
CUL3-216ENST00000617432 IGIPA6NJ69 53 aa2.79□□□□□ -1.96
CUL3-216ENST00000617432 RAB5AP20339 215 aa2.79□□□□□ -1.96
CUL3-216ENST00000617432 CD164Q04900 197 aa2.79□□□□□ -1.96
CUL3-216ENST00000617432 NOTCH2NLQ7Z3S9 236 aa2.79□□□□□ -1.96
CUL3-216ENST00000617432 FAM19A5Q7Z5A7 132 aaPredicted RBP2.79□□□□□ -1.96
CUL3-216ENST00000617432 C7orf33Q8WU49 177 aa2.79□□□□□ -1.96
CUL3-216ENST00000617432 TMEM141Q96I45 108 aa2.79□□□□□ -1.96
CUL3-216ENST00000617432 C2orf48Q96LS8 159 aa2.79□□□□□ -1.96
CUL3-216ENST00000617432 AMELXQ99217 191 aa2.79□□□□□ -1.96
CUL3-216ENST00000617432 PPDPFQ9H3Y8 114 aa2.79□□□□□ -1.96
CUL3-216ENST00000617432 PSORS1C2Q9UIG4 136 aa2.79□□□□□ -1.96
CUL3-216ENST00000617432 TGIF2-C20orf24A0A0A6YYL0 155 aa2.78□□□□□ -1.96
CUL3-216ENST00000617432 NDUFAF8A1L188 74 aa2.78□□□□□ -1.96
CUL3-216ENST00000617432 C9orf129Q5T035 196 aaKnown RBP2.78□□□□□ -1.96
CUL3-216ENST00000617432 TEX43Q6ZNM6 134 aa2.78□□□□□ -1.96
CUL3-216ENST00000617432 OR10D4PQ8NGN7 298 aa2.78□□□□□ -1.96
CUL3-216ENST00000617432 MRPL35Q9NZE8 188 aaKnown RBP2.78□□□□□ -1.96
CUL3-216ENST00000617432 TOMM7Q9P0U1 55 aa2.78□□□□□ -1.96
CUL3-216ENST00000617432 CYSLTR1Q9Y271 337 aa2.78□□□□□ -1.96
CUL3-216ENST00000617432 PYGO1Q9Y3Y4 419 aa2.78□□□□□ -1.96
CUL3-216ENST00000617432 A0A096LNJ9 63 aa2.77□□□□□ -1.97
CUL3-216ENST00000617432 TINCRA0A1B0GVN0 87 aa2.77□□□□□ -1.97
CUL3-216ENST00000617432 TSTD3H0UI37 97 aa2.77□□□□□ -1.97
CUL3-216ENST00000617432 NDUFA1O15239 70 aa2.77□□□□□ -1.97
CUL3-216ENST00000617432 PMCHL1Q16048 86 aa2.77□□□□□ -1.97
CUL3-216ENST00000617432 NDUFA5Q16718 116 aa2.77□□□□□ -1.97
CUL3-216ENST00000617432 C10orf91Q5T1B1 145 aa2.77□□□□□ -1.97
CUL3-216ENST00000617432 FAM19A1Q7Z5A9 133 aa2.77□□□□□ -1.97
CUL3-216ENST00000617432 TOMM6Q96B49 74 aa2.77□□□□□ -1.97
CUL3-216ENST00000617432 SEC11CQ9BY50 192 aa2.77□□□□□ -1.97
CUL3-216ENST00000617432 CDKN2A-AS1Q9UH64 79 aa2.77□□□□□ -1.97
CUL3-216ENST00000617432 LAMTOR2Q9Y2Q5 125 aa2.77□□□□□ -1.97
CUL3-216ENST00000617432 SPINK8P0C7L1 97 aa2.76□□□□□ -1.97
CUL3-216ENST00000617432 RPL24P83731 157 aaKnown RBP2.76□□□□□ -1.97
CUL3-216ENST00000617432 SMAGPQ0VAQ4 97 aa2.76□□□□□ -1.97
CUL3-216ENST00000617432 ORMDL2Q53FV1 153 aa2.76□□□□□ -1.97
CUL3-216ENST00000617432 C1orf137Q5JT78 98 aa2.76□□□□□ -1.97
CUL3-216ENST00000617432 LINC01600Q96MT4 127 aa2.76□□□□□ -1.97
CUL3-216ENST00000617432 C2orf88Q9BSF0 95 aa2.76□□□□□ -1.97
CUL3-216ENST00000617432 XAGE1AQ9HD64 81 aa2.76□□□□□ -1.97
CUL3-216ENST00000617432 CARHSP1Q9Y2V2 147 aaKnown RBP2.76□□□□□ -1.97
CUL3-216ENST00000617432 LINC01546A6NGU7 62 aa2.76□□□□□ -1.97
CUL3-216ENST00000617432 SCO1O75880 301 aa2.76□□□□□ -1.97
CUL3-216ENST00000617432 MT-ND6P03923 174 aa2.76□□□□□ -1.97
CUL3-216ENST00000617432 LINC00614P0C842 121 aa2.76□□□□□ -1.97
CUL3-216ENST00000617432 TLX1NBP0CAT3 122 aa2.76□□□□□ -1.97
CUL3-216ENST00000617432 FABP9Q0Z7S8 132 aa2.76□□□□□ -1.97
CUL3-216ENST00000617432 Q6ZN92 141 aa2.76□□□□□ -1.97
CUL3-216ENST00000617432 FAM19A3Q7Z5A8 133 aa2.76□□□□□ -1.97
CUL3-216ENST00000617432 SCGB3A1Q96QR1 104 aa2.76□□□□□ -1.97
CUL3-216ENST00000617432 TIMM17AQ99595 171 aa2.76□□□□□ -1.97
CUL3-216ENST00000617432 GNB1LQ9BYB4 327 aa2.76□□□□□ -1.97
CUL3-216ENST00000617432 NXT2Q9NPJ8 142 aaKnown RBP2.76□□□□□ -1.97
CUL3-216ENST00000617432 LINC00474Q9P2X8 69 aa2.76□□□□□ -1.97
CUL3-216ENST00000617432 TRAV9-1A0A075B6T8 112 aa2.75□□□□□ -1.97
CUL3-216ENST00000617432 APOC3P02656 99 aa2.75□□□□□ -1.97
CUL3-216ENST00000617432 IGLV7-43P04211 117 aa2.75□□□□□ -1.97
CUL3-216ENST00000617432 SCGB1A1P11684 91 aa2.75□□□□□ -1.97
CUL3-216ENST00000617432 S100PP25815 95 aa2.75□□□□□ -1.97
CUL3-216ENST00000617432 SPINK6Q6UWN8 80 aa2.75□□□□□ -1.97
CUL3-216ENST00000617432 C18orf32Q8TCD1 76 aa2.75□□□□□ -1.97
CUL3-216ENST00000617432 YPEL4Q96NS1 127 aa2.75□□□□□ -1.97
CUL3-216ENST00000617432 CST9LQ9H4G1 147 aa2.75□□□□□ -1.97
CUL3-216ENST00000617432 IGLV5-45A0A087WSX0 123 aa2.74□□□□□ -1.97
CUL3-216ENST00000617432 TRBV30A0A0K0K1B3 111 aa2.74□□□□□ -1.97
CUL3-216ENST00000617432 FAM240AA0A1B0GVK7 77 aa2.74□□□□□ -1.97
CUL3-216ENST00000617432 E9PLD3 99 aa2.74□□□□□ -1.97
CUL3-216ENST00000617432 NDUFC2-KCTD14E9PQ53 114 aa2.74□□□□□ -1.97
CUL3-216ENST00000617432 KRTAP1-4P0C5Y4 121 aa2.74□□□□□ -1.97
CUL3-216ENST00000617432 HERVK_113P63121 156 aa2.74□□□□□ -1.97
CUL3-216ENST00000617432 RHEBQ15382 184 aa2.74□□□□□ -1.97
CUL3-216ENST00000617432 FA2HQ7L5A8 372 aa2.74□□□□□ -1.97
CUL3-216ENST00000617432 CBLN2Q8IUK8 224 aa2.74□□□□□ -1.97
CUL3-216ENST00000617432 Q8IZM0 81 aa2.74□□□□□ -1.97
CUL3-216ENST00000617432 Q8NDZ9 215 aa2.74□□□□□ -1.97
CUL3-216ENST00000617432 TRAPPC1Q9Y5R8 145 aa2.74□□□□□ -1.97
CUL3-216ENST00000617432 K7EMI3 77 aa2.73□□□□□ -1.97
CUL3-216ENST00000617432 ZNF22P17026 224 aaPredicted RBP2.73□□□□□ -1.97
CUL3-216ENST00000617432 NDUFA6P56556 154 aa2.73□□□□□ -1.97
CUL3-216ENST00000617432 RAB5BP61020 215 aa2.73□□□□□ -1.97
CUL3-216ENST00000617432 CKS1BP61024 79 aa2.73□□□□□ -1.97
CUL3-216ENST00000617432 UBE2BP63146 152 aa2.73□□□□□ -1.97
CUL3-216ENST00000617432 PMVKQ15126 192 aa2.73□□□□□ -1.97
CUL3-216ENST00000617432 MRPL55Q7Z7F7 128 aaKnown RBP2.73□□□□□ -1.97
CUL3-216ENST00000617432 COX7B2Q8TF08 81 aa2.73□□□□□ -1.97
CUL3-216ENST00000617432 SMCO4Q9NRQ5 59 aa2.73□□□□□ -1.97
CUL3-216ENST00000617432 PKIGQ9Y2B9 76 aa2.73□□□□□ -1.97
CUL3-216ENST00000617432 C22orf24Q9Y442 160 aa2.73□□□□□ -1.97
CUL3-216ENST00000617432 LRP2P98164 4655 aa2.72□□□□□ -1.97
CUL3-216ENST00000617432 LPAP08519 4548 aa2.72□□□□□ -1.97
CUL3-216ENST00000617432 A0A1B0GWB2 263 aa2.72□□□□□ -1.97
CUL3-216ENST00000617432 A6NDN8 102 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms