RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 SLPIP03973 132 aa15.21■□□□□ 0.03
POLR2J3-220ENST00000613744 TRAV7A0A075B6U4 112 aa15.21■□□□□ 0.03
POLR2J3-220ENST00000613744 TRAV23DV6A0A075B6W5 121 aa15.21■□□□□ 0.03
POLR2J3-220ENST00000613744 A0A087WZ39 114 aa15.21■□□□□ 0.03
POLR2J3-220ENST00000613744 IGHV3OR16-9A0A0B4J2B5 98 aa15.21■□□□□ 0.03
POLR2J3-220ENST00000613744 RPL35AP18077 110 aaKnown RBP15.2■□□□□ 0.02
POLR2J3-220ENST00000613744 C20orf197Q8N268 126 aa15.19■□□□□ 0.02
POLR2J3-220ENST00000613744 Q8N814 137 aa15.19■□□□□ 0.02
POLR2J3-220ENST00000613744 PFN2P35080 140 aa15.18■□□□□ 0.02
POLR2J3-220ENST00000613744 KPRPQ5T749 579 aaPredicted RBP15.18■□□□□ 0.02
POLR2J3-220ENST00000613744 ENHOQ6UWT2 76 aa15.18■□□□□ 0.02
POLR2J3-220ENST00000613744 FAM19A1Q7Z5A9 133 aa15.17■□□□□ 0.02
POLR2J3-220ENST00000613744 IGHV4-30-4P0DP06 118 aa15.16■□□□□ 0.02
POLR2J3-220ENST00000613744 PRO0628Q9UI54 55 aa15.16■□□□□ 0.02
POLR2J3-220ENST00000613744 H7BZZ5 65 aa15.15■□□□□ 0.02
POLR2J3-220ENST00000613744 KLKP1Q107X0 134 aa15.15■□□□□ 0.02
POLR2J3-220ENST00000613744 C1orf158Q8N1D5 194 aa15.15■□□□□ 0.02
POLR2J3-220ENST00000613744 K7EIL1 84 aa15.13■□□□□ 0.01
POLR2J3-220ENST00000613744 Q6ZTI0 123 aa15.12■□□□□ 0.01
POLR2J3-220ENST00000613744 LOC110117498A0A087WWA1 95 aa15.1■□□□□ 0.01
POLR2J3-220ENST00000613744 SMIM26A0A096LP01 95 aa15.08■□□□□ 0.01
POLR2J3-220ENST00000613744 NANOS2P60321 138 aaKnown RBP15.08■□□□□ 0.01
POLR2J3-220ENST00000613744 C6orf226Q5I0X4 101 aa15.08■□□□□ 0
POLR2J3-220ENST00000613744 Q8IZM0 81 aa15.07■□□□□ 0
POLR2J3-220ENST00000613744 NDUFC1O43677 76 aa15.07■□□□□ 0
POLR2J3-220ENST00000613744 GIG44P09565 113 aaPredicted RBP15.07■□□□□ 0
POLR2J3-220ENST00000613744 ATP5EP56381 51 aaPredicted RBP15.06■□□□□ 0
POLR2J3-220ENST00000613744 Q6ZQT0 140 aa15.06■□□□□ 0
POLR2J3-220ENST00000613744 IGLV4-60A0A075B6I1 120 aa15.05■□□□□ 0
POLR2J3-220ENST00000613744 TRBV6-8A0A0A6YYG3 113 aa15.05■□□□□ 0
POLR2J3-220ENST00000613744 H3BQ85 93 aa15.05■□□□□ -0
POLR2J3-220ENST00000613744 MEGF8Q7Z7M0 2845 aa15.04■□□□□ -0
POLR2J3-220ENST00000613744 NBEAL2Q6ZNJ1 2754 aa15.04■□□□□ -0
POLR2J3-220ENST00000613744 ZNF561-AS1K7EIQ3 104 aa15.04■□□□□ -0
POLR2J3-220ENST00000613744 PDE6GP18545 87 aa15.04■□□□□ -0
POLR2J3-220ENST00000613744 RBM3P98179 157 aaKnown RBP15.03■□□□□ -0
POLR2J3-220ENST00000613744 COX17Q14061 63 aa15.03■□□□□ -0
POLR2J3-220ENST00000613744 IGKV3OR2-268A0A0C4DH90 116 aa15.02■□□□□ -0
POLR2J3-220ENST00000613744 LINC00959A0A1B0GUT2 108 aa15.02■□□□□ -0
POLR2J3-220ENST00000613744 CXCL6P80162 114 aa15.02■□□□□ -0
POLR2J3-220ENST00000613744 C6orf223Q8N319 242 aa15.02■□□□□ -0
POLR2J3-220ENST00000613744 C16orf74Q96GX8 76 aa15.01□□□□□ -0.01
POLR2J3-220ENST00000613744 LINC01547P58512 204 aaPredicted RBP15.01□□□□□ -0.01
POLR2J3-220ENST00000613744 NOP10Q9NPE3 64 aaKnown RBP15.01□□□□□ -0.01
POLR2J3-220ENST00000613744 APOC4P55056 127 aa14.99□□□□□ -0.01
POLR2J3-220ENST00000613744 DEFB135Q30KP9 77 aa14.99□□□□□ -0.01
POLR2J3-220ENST00000613744 LINC00575Q6W349 94 aa14.99□□□□□ -0.01
POLR2J3-220ENST00000613744 LINC00336Q6ZUF6 198 aa14.99□□□□□ -0.01
POLR2J3-220ENST00000613744 CSNK1G2-AS1Q8NCQ2 148 aa14.99□□□□□ -0.01
POLR2J3-220ENST00000613744 TRGV2A0A075B6R0 118 aa14.97□□□□□ -0.01
POLR2J3-220ENST00000613744 LOC100131303A0A0U1RQF7 123 aa14.97□□□□□ -0.01
POLR2J3-220ENST00000613744 RETNQ9HD89 108 aa14.97□□□□□ -0.01
POLR2J3-220ENST00000613744 Q6ZVQ6 151 aa14.96□□□□□ -0.01
POLR2J3-220ENST00000613744 TRGV4A0A0C4DH28 118 aa14.96□□□□□ -0.02
POLR2J3-220ENST00000613744 PLAC8L1A1L4L8 177 aa14.94□□□□□ -0.02
POLR2J3-220ENST00000613744 MUC7Q8TAX7 377 aa14.93□□□□□ -0.02
POLR2J3-220ENST00000613744 A0A1B0GUV1 79 aa14.93□□□□□ -0.02
POLR2J3-220ENST00000613744 F8WEM9 126 aa14.93□□□□□ -0.02
POLR2J3-220ENST00000613744 C6orf99Q4VX62 202 aa14.93□□□□□ -0.02
POLR2J3-220ENST00000613744 FP248Q71RG6 208 aaPredicted RBP14.93□□□□□ -0.02
POLR2J3-220ENST00000613744 TRAV10A0A0B4J240 114 aa14.91□□□□□ -0.02
POLR2J3-220ENST00000613744 C11orf68Q9H3H3 251 aaKnown RBP14.91□□□□□ -0.02
POLR2J3-220ENST00000613744 IGHV4-28A0A0C4DH34 117 aa14.91□□□□□ -0.02
POLR2J3-220ENST00000613744 HAMPP81172 84 aa14.91□□□□□ -0.02
POLR2J3-220ENST00000613744 RMI2Q96E14 147 aa14.91□□□□□ -0.02
POLR2J3-220ENST00000613744 ERC2-IT1O76042 136 aa14.9□□□□□ -0.02
POLR2J3-220ENST00000613744 LAMTOR3Q9UHA4 124 aa14.89□□□□□ -0.03
POLR2J3-220ENST00000613744 PRKDCP78527 4128 aaKnown RBP14.89□□□□□ -0.03
POLR2J3-220ENST00000613744 PRR3P79522 188 aaKnown RBP14.89□□□□□ -0.03
POLR2J3-220ENST00000613744 SNURFQ9Y675 71 aa14.88□□□□□ -0.03
POLR2J3-220ENST00000613744 TRBV7-6A0A0J9YX20 115 aa14.87□□□□□ -0.03
POLR2J3-220ENST00000613744 TRBV7-4A0A0J9YYF1 115 aa14.87□□□□□ -0.03
POLR2J3-220ENST00000613744 X6R8D5 127 aa14.86□□□□□ -0.03
POLR2J3-220ENST00000613744 DEFB4AO15263 64 aa14.86□□□□□ -0.03
POLR2J3-220ENST00000613744 KIAA0087Q14695 138 aa14.86□□□□□ -0.03
POLR2J3-220ENST00000613744 B9D2Q9BPU9 175 aa14.85□□□□□ -0.03
POLR2J3-220ENST00000613744 TENM3Q9P273 2699 aa14.85□□□□□ -0.03
POLR2J3-220ENST00000613744 Q8N3U1 123 aa14.85□□□□□ -0.03
POLR2J3-220ENST00000613744 C1orf43Q9BWL3 253 aa14.85□□□□□ -0.03
POLR2J3-220ENST00000613744 COL7A1Q02388 2944 aa14.84□□□□□ -0.03
POLR2J3-220ENST00000613744 MIFP14174 115 aa14.84□□□□□ -0.03
POLR2J3-220ENST00000613744 TM2D3Q9BRN9 247 aa14.84□□□□□ -0.03
POLR2J3-220ENST00000613744 M0R2N4 97 aa14.81□□□□□ -0.04
POLR2J3-220ENST00000613744 CD164L2Q6UWJ8 174 aa14.81□□□□□ -0.04
POLR2J3-220ENST00000613744 FBN3Q75N90 2809 aa14.81□□□□□ -0.04
POLR2J3-220ENST00000613744 DNAH9Q9NYC9 4486 aa14.8□□□□□ -0.04
POLR2J3-220ENST00000613744 F8WDY8 70 aa14.8□□□□□ -0.04
POLR2J3-220ENST00000613744 HUWE1Q7Z6Z7 4374 aaKnown RBP14.79□□□□□ -0.04
POLR2J3-220ENST00000613744 IGLV6-57P01721 117 aa14.78□□□□□ -0.04
POLR2J3-220ENST00000613744 NREPQ16612 68 aa14.78□□□□□ -0.04
POLR2J3-220ENST00000613744 Q8NAQ8 132 aa14.78□□□□□ -0.04
POLR2J3-220ENST00000613744 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.76□□□□□ -0.05
POLR2J3-220ENST00000613744 Q6ZQY7 126 aa14.75□□□□□ -0.05
POLR2J3-220ENST00000613744 TMEM254Q8TBM7 123 aa14.75□□□□□ -0.05
POLR2J3-220ENST00000613744 DEFB130BP0DP73 79 aa14.75□□□□□ -0.05
POLR2J3-220ENST00000613744 DEFB130AP0DP74 79 aa14.75□□□□□ -0.05
POLR2J3-220ENST00000613744 Q8NDZ9 215 aa14.74□□□□□ -0.05
POLR2J3-220ENST00000613744 A0A0J9YWU9 116 aa14.73□□□□□ -0.05
POLR2J3-220ENST00000613744 LINC00612Q8N6U2 182 aa14.72□□□□□ -0.05
POLR2J3-220ENST00000613744 LINC00474Q9P2X8 69 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms