RNA–Protein interactions for RNA: ENST00000613421.4

GGA3-220, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 5,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-220ENST00000613421 Q9BRP9 147 aa9.46□□□□□ -0.9
GGA3-220ENST00000613421 Q8NAQ8 132 aa9.44□□□□□ -0.9
GGA3-220ENST00000613421 C22orf24Q9Y442 160 aa9.44□□□□□ -0.9
GGA3-220ENST00000613421 CASC2Q6XLA1 102 aa9.44□□□□□ -0.9
GGA3-220ENST00000613421 A0A087WSZ3 146 aa9.43□□□□□ -0.9
GGA3-220ENST00000613421 CXCL6P80162 114 aa9.43□□□□□ -0.9
GGA3-220ENST00000613421 SERP1Q9Y6X1 66 aa9.42□□□□□ -0.9
GGA3-220ENST00000613421 MKI67P46013 3256 aaKnown RBP9.42□□□□□ -0.9
GGA3-220ENST00000613421 SEC61GP60059 68 aa9.42□□□□□ -0.9
GGA3-220ENST00000613421 SPATA3Q8NHX4 192 aa9.41□□□□□ -0.9
GGA3-220ENST00000613421 SMIM26A0A096LP01 95 aa9.41□□□□□ -0.9
GGA3-220ENST00000613421 PRLHP81277 87 aa9.41□□□□□ -0.9
GGA3-220ENST00000613421 CSNK1G2-AS1Q8NCQ2 148 aa9.41□□□□□ -0.9
GGA3-220ENST00000613421 C1orf195Q5TG92 126 aa9.4□□□□□ -0.9
GGA3-220ENST00000613421 LAMA3Q16787 3333 aa9.4□□□□□ -0.91
GGA3-220ENST00000613421 SPTSSBQ8NFR3 76 aa9.4□□□□□ -0.91
GGA3-220ENST00000613421 LINC00208Q96KT6 92 aa9.4□□□□□ -0.91
GGA3-220ENST00000613421 TRBV7-6A0A0J9YX20 115 aa9.39□□□□□ -0.91
GGA3-220ENST00000613421 KIAA0087Q14695 138 aa9.39□□□□□ -0.91
GGA3-220ENST00000613421 ELOF1P60002 83 aaKnown RBP9.39□□□□□ -0.91
GGA3-220ENST00000613421 IGLV5-52A0A0A0MRZ9 124 aa9.39□□□□□ -0.91
GGA3-220ENST00000613421 Q8N9L7 120 aa9.39□□□□□ -0.91
GGA3-220ENST00000613421 LINC00167Q96N53 147 aa9.38□□□□□ -0.91
GGA3-220ENST00000613421 TMEM254Q8TBM7 123 aa9.37□□□□□ -0.91
GGA3-220ENST00000613421 SMCR5Q8TEV8 140 aa9.37□□□□□ -0.91
GGA3-220ENST00000613421 DEFB116Q30KQ4 102 aa9.36□□□□□ -0.91
GGA3-220ENST00000613421 KRTAP24-1Q3LI83 254 aa9.36□□□□□ -0.91
GGA3-220ENST00000613421 Q6ZQT0 140 aa9.35□□□□□ -0.91
GGA3-220ENST00000613421 EIF4EBP3O60516 100 aaPredicted RBP9.35□□□□□ -0.91
GGA3-220ENST00000613421 CIRBP-AS1Q8TBR5 109 aa9.34□□□□□ -0.91
GGA3-220ENST00000613421 GVQW2A0A096LPI5 108 aaPredicted RBP9.34□□□□□ -0.91
GGA3-220ENST00000613421 HCG22E2RYF7 251 aa9.34□□□□□ -0.91
GGA3-220ENST00000613421 A0A0C4DFX4 3053 aa9.34□□□□□ -0.91
GGA3-220ENST00000613421 BRCA2P51587 3418 aa9.34□□□□□ -0.91
GGA3-220ENST00000613421 IGHV6-1A0A0B4J1U7 121 aa9.34□□□□□ -0.91
GGA3-220ENST00000613421 GIG44P09565 113 aaPredicted RBP9.34□□□□□ -0.92
GGA3-220ENST00000613421 LOC110117498A0A087WWA1 95 aa9.33□□□□□ -0.92
GGA3-220ENST00000613421 NHLRC4P0CG21 123 aaPredicted RBP9.32□□□□□ -0.92
GGA3-220ENST00000613421 C19orf73Q9NVV2 129 aa9.32□□□□□ -0.92
GGA3-220ENST00000613421 C1orf134Q5TEV5 83 aa9.32□□□□□ -0.92
GGA3-220ENST00000613421 CRYGAP11844 174 aa9.31□□□□□ -0.92
GGA3-220ENST00000613421 Q6ZRX8 168 aa9.3□□□□□ -0.92
GGA3-220ENST00000613421 PRR15LQ9BU68 103 aa9.3□□□□□ -0.92
GGA3-220ENST00000613421 ZNF575Q86XF7 245 aa9.29□□□□□ -0.92
GGA3-220ENST00000613421 IGLV6-57P01721 117 aa9.29□□□□□ -0.92
GGA3-220ENST00000613421 LINC00588Q9Y4M8 146 aa9.29□□□□□ -0.92
GGA3-220ENST00000613421 H0Y9P7 68 aa9.29□□□□□ -0.92
GGA3-220ENST00000613421 MDFIQ99750 246 aa9.29□□□□□ -0.92
GGA3-220ENST00000613421 A6NED7 52 aa9.29□□□□□ -0.92
GGA3-220ENST00000613421 BCE1O60756 84 aa9.29□□□□□ -0.92
GGA3-220ENST00000613421 SMIM29Q86T20 159 aa9.28□□□□□ -0.92
GGA3-220ENST00000613421 F8P00451 2351 aa9.28□□□□□ -0.92
GGA3-220ENST00000613421 A0A1B0GW54 56 aa9.27□□□□□ -0.92
GGA3-220ENST00000613421 VPREB1P12018 145 aa9.27□□□□□ -0.93
GGA3-220ENST00000613421 Q6ZRP5 223 aa9.27□□□□□ -0.93
GGA3-220ENST00000613421 RPS28P62857 69 aaKnown RBP9.26□□□□□ -0.93
GGA3-220ENST00000613421 LINC00612Q8N6U2 182 aa9.26□□□□□ -0.93
GGA3-220ENST00000613421 LAMA2P24043 3122 aaKnown RBP9.25□□□□□ -0.93
GGA3-220ENST00000613421 DNAH10OSP0CZ25 163 aa9.25□□□□□ -0.93
GGA3-220ENST00000613421 Q8NBF4 154 aa9.25□□□□□ -0.93
GGA3-220ENST00000613421 KRTAP10-3P60369 221 aa9.24□□□□□ -0.93
GGA3-220ENST00000613421 PCOTHQ58A44 107 aa9.24□□□□□ -0.93
GGA3-220ENST00000613421 C4orf26Q17RF5 130 aa9.24□□□□□ -0.93
GGA3-220ENST00000613421 KRTAP1-3Q8IUG1 177 aa9.24□□□□□ -0.93
GGA3-220ENST00000613421 PRO0628Q9UI54 55 aa9.24□□□□□ -0.93
GGA3-220ENST00000613421 HECTD1Q9ULT8 2610 aa9.23□□□□□ -0.93
GGA3-220ENST00000613421 PRR34Q9NV39 138 aa9.23□□□□□ -0.93
GGA3-220ENST00000613421 ST20-AS1Q8NBB2 130 aa9.22□□□□□ -0.93
GGA3-220ENST00000613421 LINC00476Q8WZB0 136 aa9.22□□□□□ -0.93
GGA3-220ENST00000613421 C16orf90A8MZG2 172 aa9.22□□□□□ -0.93
GGA3-220ENST00000613421 hDV103S1A0JD37 113 aa9.21□□□□□ -0.93
GGA3-220ENST00000613421 PHF5AQ7RTV0 110 aaKnown RBP9.21□□□□□ -0.93
GGA3-220ENST00000613421 CFAP54Q96N23 3096 aa9.19□□□□□ -0.94
GGA3-220ENST00000613421 FLNAP21333 2647 aaKnown RBP9.18□□□□□ -0.94
GGA3-220ENST00000613421 C1orf64Q8NEQ6 169 aa9.18□□□□□ -0.94
GGA3-220ENST00000613421 KRTAP10-11P60412 298 aa9.18□□□□□ -0.94
GGA3-220ENST00000613421 NBDYA0A0U1RRE5 68 aa9.18□□□□□ -0.94
GGA3-220ENST00000613421 UNC80Q8N2C7 3258 aa9.18□□□□□ -0.94
GGA3-220ENST00000613421 EPM2AB3EWF7 344 aa9.18□□□□□ -0.94
GGA3-220ENST00000613421 SERTAD4-AS1Q5TG53 156 aa9.18□□□□□ -0.94
GGA3-220ENST00000613421 FAM168BA1KXE4 195 aa9.17□□□□□ -0.94
GGA3-220ENST00000613421 MOBPQ13875 183 aa9.16□□□□□ -0.94
GGA3-220ENST00000613421 RETNLBQ9BQ08 111 aa9.16□□□□□ -0.94
GGA3-220ENST00000613421 FLNBO75369 2602 aaKnown RBP9.16□□□□□ -0.94
GGA3-220ENST00000613421 LINC00528Q8N1L1 170 aa9.16□□□□□ -0.94
GGA3-220ENST00000613421 C15orf56Q8N910 161 aa9.16□□□□□ -0.94
GGA3-220ENST00000613421 KCNQ1DNQ9H478 68 aa9.16□□□□□ -0.94
GGA3-220ENST00000613421 PSPHP1O15172 72 aa9.15□□□□□ -0.94
GGA3-220ENST00000613421 KRTAP1-1Q07627 177 aa9.15□□□□□ -0.94
GGA3-220ENST00000613421 TM2D3Q9BRN9 247 aa9.15□□□□□ -0.94
GGA3-220ENST00000613421 PRUNE2Q8WUY3 3088 aa9.15□□□□□ -0.94
GGA3-220ENST00000613421 MGAQ8IWI9 3026 aa9.15□□□□□ -0.95
GGA3-220ENST00000613421 ZNF292O60281 2723 aa9.14□□□□□ -0.95
GGA3-220ENST00000613421 PMAIP1Q13794 54 aa9.14□□□□□ -0.95
GGA3-220ENST00000613421 IGLV1-50A0A075B6I6 118 aa9.14□□□□□ -0.95
GGA3-220ENST00000613421 K7ERS5 55 aa9.14□□□□□ -0.95
GGA3-220ENST00000613421 CHTF8P0CG12 524 aa9.14□□□□□ -0.95
GGA3-220ENST00000613421 TRBV7-4A0A0J9YYF1 115 aa9.12□□□□□ -0.95
GGA3-220ENST00000613421 LIMD2Q9BT23 127 aa9.12□□□□□ -0.95
GGA3-220ENST00000613421 RTL8CO15255 209 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms