RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 TMEM256-PLSCR3K7ERE1 68 aa11.64□□□□□ -0.55
NEK3-206ENST00000611833 OXLD1Q5BKU9 147 aa11.63□□□□□ -0.55
NEK3-206ENST00000611833 LINC00846Q9NV44 126 aa11.63□□□□□ -0.55
NEK3-206ENST00000611833 JMJD7-PLA2G4BH0Y9G9 81 aa11.61□□□□□ -0.55
NEK3-206ENST00000611833 RETNQ9HD89 108 aa11.61□□□□□ -0.55
NEK3-206ENST00000611833 RPL18AQ02543 176 aaKnown RBP11.6□□□□□ -0.55
NEK3-206ENST00000611833 CCKP06307 115 aa11.59□□□□□ -0.55
NEK3-206ENST00000611833 KRTAP10-11P60412 298 aa11.59□□□□□ -0.55
NEK3-206ENST00000611833 LINC00575Q6W349 94 aa11.59□□□□□ -0.55
NEK3-206ENST00000611833 IGKV3D-7A0A0C4DH55 119 aa11.58□□□□□ -0.56
NEK3-206ENST00000611833 KPRPQ5T749 579 aaPredicted RBP11.58□□□□□ -0.56
NEK3-206ENST00000611833 GVQW2A0A096LPI5 108 aaPredicted RBP11.58□□□□□ -0.56
NEK3-206ENST00000611833 WFDC10BQ8IUB3 73 aa11.58□□□□□ -0.56
NEK3-206ENST00000611833 C6orf48Q9UBA6 75 aa11.57□□□□□ -0.56
NEK3-206ENST00000611833 Q6JHZ5 121 aa11.57□□□□□ -0.56
NEK3-206ENST00000611833 hADV29S1A0JD25 119 aa11.56□□□□□ -0.56
NEK3-206ENST00000611833 IGLV6-57P01721 117 aa11.56□□□□□ -0.56
NEK3-206ENST00000611833 ZNF561-AS1K7EIQ3 104 aa11.55□□□□□ -0.56
NEK3-206ENST00000611833 XAGE1AQ9HD64 81 aa11.55□□□□□ -0.56
NEK3-206ENST00000611833 H3BNG1 76 aa11.54□□□□□ -0.56
NEK3-206ENST00000611833 HIGD2BQ4VC39 106 aa11.54□□□□□ -0.56
NEK3-206ENST00000611833 Q6ZTC4 211 aa11.54□□□□□ -0.56
NEK3-206ENST00000611833 CAMK2N2Q96S95 79 aa11.53□□□□□ -0.56
NEK3-206ENST00000611833 TRBV10-3A0A0K0K1G6 114 aa11.52□□□□□ -0.57
NEK3-206ENST00000611833 ANK2Q01484 3957 aa11.51□□□□□ -0.57
NEK3-206ENST00000611833 TRAV23DV6A0A075B6W5 121 aa11.51□□□□□ -0.57
NEK3-206ENST00000611833 C3orf22Q8N5N4 141 aa11.51□□□□□ -0.57
NEK3-206ENST00000611833 F8P00451 2351 aa11.51□□□□□ -0.57
NEK3-206ENST00000611833 KRTAP24-1Q3LI83 254 aa11.5□□□□□ -0.57
NEK3-206ENST00000611833 LAMTOR3Q9UHA4 124 aa11.5□□□□□ -0.57
NEK3-206ENST00000611833 HIST1H4AP62805 103 aaKnown RBP11.49□□□□□ -0.57
NEK3-206ENST00000611833 EGFEM1PQ0D2K5 195 aa11.49□□□□□ -0.57
NEK3-206ENST00000611833 C3orf56Q8N813 242 aa11.49□□□□□ -0.57
NEK3-206ENST00000611833 PKD1L1Q8TDX9 2849 aa11.49□□□□□ -0.57
NEK3-206ENST00000611833 ATOX1O00244 68 aa11.49□□□□□ -0.57
NEK3-206ENST00000611833 RBM3P98179 157 aaKnown RBP11.49□□□□□ -0.57
NEK3-206ENST00000611833 DIRC1Q969H9 104 aa11.49□□□□□ -0.57
NEK3-206ENST00000611833 UQCRQO14949 82 aa11.48□□□□□ -0.57
NEK3-206ENST00000611833 ESRGQ1W209 222 aa11.48□□□□□ -0.57
NEK3-206ENST00000611833 C9orf153Q5TBE3 101 aa11.48□□□□□ -0.57
NEK3-206ENST00000611833 KRTAP26-1Q6PEX3 210 aa11.47□□□□□ -0.57
NEK3-206ENST00000611833 Q6ZQY7 126 aa11.47□□□□□ -0.57
NEK3-206ENST00000611833 A0A087WVE0 104 aa11.47□□□□□ -0.57
NEK3-206ENST00000611833 FBN1P35555 2871 aaKnown RBP11.47□□□□□ -0.57
NEK3-206ENST00000611833 CMYA5Q8N3K9 4069 aa11.46□□□□□ -0.58
NEK3-206ENST00000611833 ZNF73O43830 326 aaPredicted RBP11.46□□□□□ -0.58
NEK3-206ENST00000611833 Q6ZRU5 148 aa11.46□□□□□ -0.58
NEK3-206ENST00000611833 COX7CP15954 63 aa11.45□□□□□ -0.58
NEK3-206ENST00000611833 C1orf43Q9BWL3 253 aa11.45□□□□□ -0.58
NEK3-206ENST00000611833 C15orf56Q8N910 161 aa11.44□□□□□ -0.58
NEK3-206ENST00000611833 UBL5Q9BZL1 73 aa11.44□□□□□ -0.58
NEK3-206ENST00000611833 TENM3Q9P273 2699 aa11.44□□□□□ -0.58
NEK3-206ENST00000611833 COX7BP24311 80 aa11.44□□□□□ -0.58
NEK3-206ENST00000611833 DEFB131BA0A096LNP1 70 aa11.43□□□□□ -0.58
NEK3-206ENST00000611833 VPREB1P12018 145 aa11.43□□□□□ -0.58
NEK3-206ENST00000611833 Q6ZQT0 140 aa11.43□□□□□ -0.58
NEK3-206ENST00000611833 H3BQ85 93 aa11.43□□□□□ -0.58
NEK3-206ENST00000611833 ATP5EP2Q5VTU8 51 aa11.43□□□□□ -0.58
NEK3-206ENST00000611833 C2orf48Q96LS8 159 aa11.43□□□□□ -0.58
NEK3-206ENST00000611833 IGKV2D-24A0A075B6R9 120 aa11.42□□□□□ -0.58
NEK3-206ENST00000611833 LOC110117498A0A087WWA1 95 aa11.42□□□□□ -0.58
NEK3-206ENST00000611833 C11orf45Q8TAV5 145 aa11.42□□□□□ -0.58
NEK3-206ENST00000611833 DSCR8Q96T75 97 aa11.42□□□□□ -0.58
NEK3-206ENST00000611833 NDUFC2-KCTD14E9PQ53 114 aa11.42□□□□□ -0.58
NEK3-206ENST00000611833 M0R378 163 aa11.41□□□□□ -0.58
NEK3-206ENST00000611833 STAB1Q9NY15 2570 aa11.41□□□□□ -0.58
NEK3-206ENST00000611833 LINC01556Q5JQF7 62 aa11.4□□□□□ -0.58
NEK3-206ENST00000611833 USP17L23D6RBM5 183 aa11.4□□□□□ -0.59
NEK3-206ENST00000611833 ELOF1P60002 83 aaKnown RBP11.4□□□□□ -0.59
NEK3-206ENST00000611833 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.4□□□□□ -0.59
NEK3-206ENST00000611833 TRBV7-6A0A0J9YX20 115 aa11.38□□□□□ -0.59
NEK3-206ENST00000611833 GHRHP01286 108 aa11.38□□□□□ -0.59
NEK3-206ENST00000611833 PDE6GP18545 87 aa11.37□□□□□ -0.59
NEK3-206ENST00000611833 Q6ZRP5 223 aa11.36□□□□□ -0.59
NEK3-206ENST00000611833 M0R2N4 97 aa11.36□□□□□ -0.59
NEK3-206ENST00000611833 SYCNQ0VAF6 134 aa11.36□□□□□ -0.59
NEK3-206ENST00000611833 FAM19A1Q7Z5A9 133 aa11.36□□□□□ -0.59
NEK3-206ENST00000611833 SERP2Q8N6R1 65 aa11.36□□□□□ -0.59
NEK3-206ENST00000611833 DNAH3Q8TD57 4116 aa11.35□□□□□ -0.59
NEK3-206ENST00000611833 CRYGAP11844 174 aa11.35□□□□□ -0.59
NEK3-206ENST00000611833 SMIM20Q8N5G0 67 aa11.35□□□□□ -0.59
NEK3-206ENST00000611833 F8WDY8 70 aa11.34□□□□□ -0.59
NEK3-206ENST00000611833 UPK3BQ9BT76 320 aa11.33□□□□□ -0.6
NEK3-206ENST00000611833 FLNBO75369 2602 aaKnown RBP11.33□□□□□ -0.6
NEK3-206ENST00000611833 DNAH10OSP0CZ25 163 aa11.31□□□□□ -0.6
NEK3-206ENST00000611833 HAMPP81172 84 aa11.31□□□□□ -0.6
NEK3-206ENST00000611833 LINC00528Q8N1L1 170 aa11.31□□□□□ -0.6
NEK3-206ENST00000611833 Q6ZVQ6 151 aa11.3□□□□□ -0.6
NEK3-206ENST00000611833 NKAPP1Q8N9T2 125 aa11.3□□□□□ -0.6
NEK3-206ENST00000611833 MAST4O15021 2626 aa11.3□□□□□ -0.6
NEK3-206ENST00000611833 TRBV7-4A0A0J9YYF1 115 aa11.29□□□□□ -0.6
NEK3-206ENST00000611833 LINC01547P58512 204 aaPredicted RBP11.29□□□□□ -0.6
NEK3-206ENST00000611833 PRB2P02812 416 aaPredicted RBP11.28□□□□□ -0.6
NEK3-206ENST00000611833 TRAV10A0A0B4J240 114 aa11.27□□□□□ -0.61
NEK3-206ENST00000611833 NOTCH1P46531 2555 aa11.27□□□□□ -0.61
NEK3-206ENST00000611833 SERTAD4-AS1Q5TG53 156 aa11.25□□□□□ -0.61
NEK3-206ENST00000611833 LINC00588Q9Y4M8 146 aa11.25□□□□□ -0.61
NEK3-206ENST00000611833 C7orf33Q8WU49 177 aa11.24□□□□□ -0.61
NEK3-206ENST00000611833 CYSTM1Q9H1C7 97 aa11.24□□□□□ -0.61
NEK3-206ENST00000611833 KCNQ1DNQ9H478 68 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms