RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 TRGV1A0A0A0MS02 117 aa2.68□□□□□ -1.98
HMGB1P50-201ENST00000605814 A8MUN3 132 aa2.68□□□□□ -1.98
HMGB1P50-201ENST00000605814 H3BUX3 64 aa2.68□□□□□ -1.98
HMGB1P50-201ENST00000605814 HTN1P15515 57 aa2.68□□□□□ -1.98
HMGB1P50-201ENST00000605814 KRTAP10-5P60370 271 aa2.68□□□□□ -1.98
HMGB1P50-201ENST00000605814 ASB16-AS1Q495Z4 193 aa2.68□□□□□ -1.98
HMGB1P50-201ENST00000605814 KRTAP5-1Q6L8H4 278 aa2.68□□□□□ -1.98
HMGB1P50-201ENST00000605814 LCA10Q71F78 164 aa2.68□□□□□ -1.98
HMGB1P50-201ENST00000605814 LINC00612Q8N6U2 182 aa2.68□□□□□ -1.98
HMGB1P50-201ENST00000605814 LINC01006Q8NI28 216 aa2.68□□□□□ -1.98
HMGB1P50-201ENST00000605814 KCNQ1DNQ9H478 68 aa2.68□□□□□ -1.98
HMGB1P50-201ENST00000605814 MAP6D1Q9H9H5 199 aa2.68□□□□□ -1.98
HMGB1P50-201ENST00000605814 CFAP54Q96N23 3096 aa2.68□□□□□ -1.98
HMGB1P50-201ENST00000605814 EP300Q09472 2414 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P50-201ENST00000605814 TRGV4A0A0C4DH28 118 aa2.67□□□□□ -1.98
HMGB1P50-201ENST00000605814 HCG22E2RYF7 251 aa2.67□□□□□ -1.98
HMGB1P50-201ENST00000605814 PSPHP1O15172 72 aa2.67□□□□□ -1.98
HMGB1P50-201ENST00000605814 PRM2P04554 102 aa2.67□□□□□ -1.98
HMGB1P50-201ENST00000605814 C7orf65Q6ZTY9 151 aa2.67□□□□□ -1.98
HMGB1P50-201ENST00000605814 Q8NDZ9 215 aa2.67□□□□□ -1.98
HMGB1P50-201ENST00000605814 C16orf74Q96GX8 76 aa2.67□□□□□ -1.98
HMGB1P50-201ENST00000605814 SPRR4Q96PI1 79 aa2.67□□□□□ -1.98
HMGB1P50-201ENST00000605814 B9D2Q9BPU9 175 aa2.67□□□□□ -1.98
HMGB1P50-201ENST00000605814 CDC42SE1Q9NRR8 79 aa2.67□□□□□ -1.98
HMGB1P50-201ENST00000605814 CR1P17927 2039 aa2.66□□□□□ -1.98
HMGB1P50-201ENST00000605814 ZNF73O43830 326 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P50-201ENST00000605814 CNBPP62633 177 aaKnown RBP2.66□□□□□ -1.98
HMGB1P50-201ENST00000605814 SCXQ7RTU7 201 aa2.66□□□□□ -1.98
HMGB1P50-201ENST00000605814 PLAC8Q9NZF1 115 aa2.66□□□□□ -1.98
HMGB1P50-201ENST00000605814 VPS13AQ96RL7 3174 aa2.66□□□□□ -1.98
HMGB1P50-201ENST00000605814 MGAQ8IWI9 3026 aa2.66□□□□□ -1.98
HMGB1P50-201ENST00000605814 VCANP13611 3396 aa2.65□□□□□ -1.98
HMGB1P50-201ENST00000605814 CHKB-CPT1BH3BT56 60 aa2.65□□□□□ -1.99
HMGB1P50-201ENST00000605814 LY6EQ16553 131 aa2.65□□□□□ -1.99
HMGB1P50-201ENST00000605814 SMIM29Q86T20 159 aa2.65□□□□□ -1.99
HMGB1P50-201ENST00000605814 PRR26Q8N8Z3 221 aa2.65□□□□□ -1.99
HMGB1P50-201ENST00000605814 CSNK1G2-AS1Q8NCQ2 148 aa2.65□□□□□ -1.99
HMGB1P50-201ENST00000605814 PRO3102Q9H379 93 aa2.65□□□□□ -1.99
HMGB1P50-201ENST00000605814 LINC01558Q9Y6Z2 57 aa2.65□□□□□ -1.99
HMGB1P50-201ENST00000605814 CFAP47Q6ZTR5 3102 aa2.65□□□□□ -1.99
HMGB1P50-201ENST00000605814 MAP1BP46821 2468 aaKnown RBP2.65□□□□□ -1.99
HMGB1P50-201ENST00000605814 ANKHD1Q8IWZ3 2542 aaKnown RBP2.65□□□□□ -1.99
HMGB1P50-201ENST00000605814 AKAP6Q13023 2319 aa2.64□□□□□ -1.99
HMGB1P50-201ENST00000605814 PRRC2CQ9Y520 2896 aaKnown RBP2.64□□□□□ -1.99
HMGB1P50-201ENST00000605814 LRCOL1A6NCL2 159 aa2.64□□□□□ -1.99
HMGB1P50-201ENST00000605814 APOC4P55056 127 aa2.64□□□□□ -1.99
HMGB1P50-201ENST00000605814 MP68P56378 58 aa2.64□□□□□ -1.99
HMGB1P50-201ENST00000605814 DSCR10P59022 87 aa2.64□□□□□ -1.99
HMGB1P50-201ENST00000605814 DEFB112Q30KQ8 113 aa2.64□□□□□ -1.99
HMGB1P50-201ENST00000605814 BRD3OSQ6XYD6 125 aa2.64□□□□□ -1.99
HMGB1P50-201ENST00000605814 LINC00208Q96KT6 92 aa2.64□□□□□ -1.99
HMGB1P50-201ENST00000605814 NOP10Q9NPE3 64 aaKnown RBP2.64□□□□□ -1.99
HMGB1P50-201ENST00000605814 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.64□□□□□ -1.99
HMGB1P50-201ENST00000605814 PIEZO2Q9H5I5 2752 aa2.63□□□□□ -1.99
HMGB1P50-201ENST00000605814 IGLV7-46A0A075B6I9 117 aa2.63□□□□□ -1.99
HMGB1P50-201ENST00000605814 IGKV3OR2-268A0A0C4DH90 116 aa2.63□□□□□ -1.99
HMGB1P50-201ENST00000605814 C8orf87E5RJ46 101 aa2.63□□□□□ -1.99
HMGB1P50-201ENST00000605814 GIG44P09565 113 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P50-201ENST00000605814 ADORA2A-AS1P86434 159 aa2.63□□□□□ -1.99
HMGB1P50-201ENST00000605814 C9orf116Q5BN46 136 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P50-201ENST00000605814 KPRPQ5T749 579 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P50-201ENST00000605814 UNQ6190/PRO20217Q6UXQ8 127 aa2.63□□□□□ -1.99
HMGB1P50-201ENST00000605814 Q8N377 158 aa2.63□□□□□ -1.99
HMGB1P50-201ENST00000605814 Q8N9L7 120 aa2.63□□□□□ -1.99
HMGB1P50-201ENST00000605814 C9orf163Q8N9P6 203 aa2.63□□□□□ -1.99
HMGB1P50-201ENST00000605814 Q8NBF4 154 aa2.63□□□□□ -1.99
HMGB1P50-201ENST00000605814 C4orf3Q8WVX3 66 aa2.63□□□□□ -1.99
HMGB1P50-201ENST00000605814 CHCHD10Q8WYQ3 142 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P50-201ENST00000605814 KLK12Q9UKR0 248 aa2.63□□□□□ -1.99
HMGB1P50-201ENST00000605814 WDFY3Q8IZQ1 3526 aa2.63□□□□□ -1.99
HMGB1P50-201ENST00000605814 NCOR1O75376 2440 aa2.62□□□□□ -1.99
HMGB1P50-201ENST00000605814 SPTBN5Q9NRC6 3674 aaKnown RBP2.62□□□□□ -1.99
HMGB1P50-201ENST00000605814 FREM2Q5SZK8 3169 aa2.62□□□□□ -1.99
HMGB1P50-201ENST00000605814 PTPRZ1P23471 2315 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P50-201ENST00000605814 A0A1W2PNM2 257 aa2.62□□□□□ -1.99
HMGB1P50-201ENST00000605814 A0A1W2PPR1 153 aa2.62□□□□□ -1.99
HMGB1P50-201ENST00000605814 INAFM1C9JVW0 142 aa2.62□□□□□ -1.99
HMGB1P50-201ENST00000605814 C3orf84H3BNL1 204 aa2.62□□□□□ -1.99
HMGB1P50-201ENST00000605814 ST20-AS1Q8NBB2 130 aa2.62□□□□□ -1.99
HMGB1P50-201ENST00000605814 DEFB124Q8NES8 71 aa2.62□□□□□ -1.99
HMGB1P50-201ENST00000605814 C11orf45Q8TAV5 145 aa2.62□□□□□ -1.99
HMGB1P50-201ENST00000605814 ZNF702PQ9H963 129 aa2.62□□□□□ -1.99
HMGB1P50-201ENST00000605814 PRR34Q9NV39 138 aa2.62□□□□□ -1.99
HMGB1P50-201ENST00000605814 ABCA2Q9BZC7 2435 aa2.62□□□□□ -1.99
HMGB1P50-201ENST00000605814 SPEGQ15772 3267 aa2.62□□□□□ -1.99
HMGB1P50-201ENST00000605814 WNK1Q9H4A3 2382 aa2.61□□□□□ -1.99
HMGB1P50-201ENST00000605814 ZDBF2Q9HCK1 2354 aa2.61□□□□□ -1.99
HMGB1P50-201ENST00000605814 CDH23Q9H251 3354 aa2.61□□□□□ -1.99
HMGB1P50-201ENST00000605814 SPTAN1Q13813 2472 aaKnown RBP2.61□□□□□ -1.99
HMGB1P50-201ENST00000605814 A8MU10 97 aa2.61□□□□□ -1.99
HMGB1P50-201ENST00000605814 B4DSR2 109 aa2.61□□□□□ -1.99
HMGB1P50-201ENST00000605814 MSMBP08118 114 aa2.61□□□□□ -1.99
HMGB1P50-201ENST00000605814 SPAG11BQ08648 103 aa2.61□□□□□ -1.99
HMGB1P50-201ENST00000605814 EGFEM1PQ0D2K5 195 aa2.61□□□□□ -1.99
HMGB1P50-201ENST00000605814 MOBPQ13875 183 aa2.61□□□□□ -1.99
HMGB1P50-201ENST00000605814 C10orf99Q6UWK7 81 aa2.61□□□□□ -1.99
HMGB1P50-201ENST00000605814 DHRS4-AS1Q9P1J3 65 aa2.61□□□□□ -1.99
HMGB1P50-201ENST00000605814 PRO0255Q9UI72 69 aa2.61□□□□□ -1.99
HMGB1P50-201ENST00000605814 TRIOBPQ9H2D6 2365 aa2.61□□□□□ -1.99
HMGB1P50-201ENST00000605814 ZFHX3Q15911 3703 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms