RNA–Protein interactions for RNA: ENST00000594372.1

SIN3B-204, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 3

Gene SIN3B, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-204ENST00000594372 C2orf88Q9BSF0 95 aa7.05□□□□□ -1.28
SIN3B-204ENST00000594372 MAP1LC3CQ9BXW4 147 aa7.05□□□□□ -1.28
SIN3B-204ENST00000594372 CDKN2A-AS1Q9UH64 79 aa7.05□□□□□ -1.28
SIN3B-204ENST00000594372 C3orf79P0CE67 100 aa7.04□□□□□ -1.28
SIN3B-204ENST00000594372 UBE2AP49459 152 aa7.04□□□□□ -1.28
SIN3B-204ENST00000594372 PRLHP81277 87 aa7.04□□□□□ -1.28
SIN3B-204ENST00000594372 TPRXLQ17RH7 258 aa7.04□□□□□ -1.28
SIN3B-204ENST00000594372 KRTAP13-1Q8IUC0 172 aa7.04□□□□□ -1.28
SIN3B-204ENST00000594372 Q8IZM0 81 aa7.04□□□□□ -1.28
SIN3B-204ENST00000594372 C3orf22Q8N5N4 141 aa7.04□□□□□ -1.28
SIN3B-204ENST00000594372 KRTAP4-1Q9BYQ7 146 aa7.04□□□□□ -1.28
SIN3B-204ENST00000594372 IGKV2-28A0A075B6P5 120 aa7.03□□□□□ -1.28
SIN3B-204ENST00000594372 LINC01549A6NIU2 74 aa7.03□□□□□ -1.28
SIN3B-204ENST00000594372 IGKV2D-28P01615 120 aa7.03□□□□□ -1.28
SIN3B-204ENST00000594372 LINC01561Q8N1V8 128 aa7.03□□□□□ -1.28
SIN3B-204ENST00000594372 AMELXQ99217 191 aa7.03□□□□□ -1.28
SIN3B-204ENST00000594372 VCX2Q9H322 139 aa7.03□□□□□ -1.28
SIN3B-204ENST00000594372 C20orf202A1L168 122 aa7.02□□□□□ -1.29
SIN3B-204ENST00000594372 F8VRH5 84 aa7.02□□□□□ -1.29
SIN3B-204ENST00000594372 SYS1-DBNDD2H3BUS1 97 aa7.02□□□□□ -1.29
SIN3B-204ENST00000594372 SCGB1D1O95968 90 aa7.02□□□□□ -1.29
SIN3B-204ENST00000594372 ERASQ7Z444 233 aa7.02□□□□□ -1.29
SIN3B-204ENST00000594372 PPDPFQ9H3Y8 114 aa7.02□□□□□ -1.29
SIN3B-204ENST00000594372 TP73-AS1Q9UF72 201 aa7.02□□□□□ -1.29
SIN3B-204ENST00000594372 SMIM6P0DI80 62 aa7.01□□□□□ -1.29
SIN3B-204ENST00000594372 TIMM17AQ99595 171 aa7.01□□□□□ -1.29
SIN3B-204ENST00000594372 IGKV2D-26A0A0A0MRZ7 120 aa7□□□□□ -1.29
SIN3B-204ENST00000594372 IGIPA6NJ69 53 aa7□□□□□ -1.29
SIN3B-204ENST00000594372 TMEM238C9JI98 176 aa7□□□□□ -1.29
SIN3B-204ENST00000594372 PYY3Q5JQD4 70 aa7□□□□□ -1.29
SIN3B-204ENST00000594372 PET117Q6UWS5 81 aa7□□□□□ -1.29
SIN3B-204ENST00000594372 JOSD1Q15040 202 aaPredicted RBP6.99□□□□□ -1.29
SIN3B-204ENST00000594372 FAM229BQ4G0N7 80 aa6.99□□□□□ -1.29
SIN3B-204ENST00000594372 PAPPA-AS1Q5QFB9 102 aa6.99□□□□□ -1.29
SIN3B-204ENST00000594372 PMCHL2Q9BQD1 86 aa6.99□□□□□ -1.29
SIN3B-204ENST00000594372 SMIM1B2RUZ4 78 aa6.98□□□□□ -1.29
SIN3B-204ENST00000594372 SPINK8P0C7L1 97 aa6.98□□□□□ -1.29
SIN3B-204ENST00000594372 PMVKQ15126 192 aa6.98□□□□□ -1.29
SIN3B-204ENST00000594372 LINC01545Q5VT33 79 aa6.98□□□□□ -1.29
SIN3B-204ENST00000594372 ATOH7Q8N100 152 aa6.98□□□□□ -1.29
SIN3B-204ENST00000594372 NKAPP1Q8N9T2 125 aa6.98□□□□□ -1.29
SIN3B-204ENST00000594372 GEMIN7Q9H840 131 aaKnown RBP6.98□□□□□ -1.29
SIN3B-204ENST00000594372 CRCT1Q9UGL9 99 aa6.98□□□□□ -1.29
SIN3B-204ENST00000594372 HERVK_113P63121 156 aa6.97□□□□□ -1.29
SIN3B-204ENST00000594372 FAM19A3Q7Z5A8 133 aa6.97□□□□□ -1.29
SIN3B-204ENST00000594372 FAM19A1Q7Z5A9 133 aa6.97□□□□□ -1.29
SIN3B-204ENST00000594372 COX7B2Q8TF08 81 aa6.97□□□□□ -1.29
SIN3B-204ENST00000594372 CHTOPQ9Y3Y2 248 aaKnown RBP6.97□□□□□ -1.29
SIN3B-204ENST00000594372 TRAV12-1A0A0B4J245 112 aa6.96□□□□□ -1.3
SIN3B-204ENST00000594372 NPSP0C0P6 89 aa6.96□□□□□ -1.3
SIN3B-204ENST00000594372 LCE2DQ5TA82 110 aaPredicted RBP6.96□□□□□ -1.3
SIN3B-204ENST00000594372 CST9LQ9H4G1 147 aa6.96□□□□□ -1.3
SIN3B-204ENST00000594372 IGLV5-37A0A075B6J1 123 aa6.95□□□□□ -1.3
SIN3B-204ENST00000594372 DPM2O94777 84 aa6.95□□□□□ -1.3
SIN3B-204ENST00000594372 Q8NDZ9 215 aa6.95□□□□□ -1.3
SIN3B-204ENST00000594372 C12orf57Q99622 126 aa6.95□□□□□ -1.3
SIN3B-204ENST00000594372 PLNP26678 52 aa6.94□□□□□ -1.3
SIN3B-204ENST00000594372 PFN2P35080 140 aa6.94□□□□□ -1.3
SIN3B-204ENST00000594372 LINC01547P58512 204 aaPredicted RBP6.94□□□□□ -1.3
SIN3B-204ENST00000594372 DAND5Q8N907 189 aa6.94□□□□□ -1.3
SIN3B-204ENST00000594372 VAMP8Q9BV40 100 aa6.94□□□□□ -1.3
SIN3B-204ENST00000594372 HSBP1L1C9JCN9 74 aa6.93□□□□□ -1.3
SIN3B-204ENST00000594372 IGKCP01834 107 aa6.93□□□□□ -1.3
SIN3B-204ENST00000594372 CXCL5P42830 114 aa6.93□□□□□ -1.3
SIN3B-204ENST00000594372 S100A12P80511 92 aa6.93□□□□□ -1.3
SIN3B-204ENST00000594372 KRTAP13-3Q3SY46 172 aa6.93□□□□□ -1.3
SIN3B-204ENST00000594372 TMEM126AQ9H061 195 aa6.93□□□□□ -1.3
SIN3B-204ENST00000594372 C11orf86A6NJI1 115 aa6.92□□□□□ -1.3
SIN3B-204ENST00000594372 M0R378 163 aa6.92□□□□□ -1.3
SIN3B-204ENST00000594372 LINC00518Q8N0U6 118 aa6.92□□□□□ -1.3
SIN3B-204ENST00000594372 LINC00337Q8N6G1 96 aa6.92□□□□□ -1.3
SIN3B-204ENST00000594372 PLEKHB2Q96CS7 222 aa6.92□□□□□ -1.3
SIN3B-204ENST00000594372 HIGD2AQ9BW72 106 aa6.92□□□□□ -1.3
SIN3B-204ENST00000594372 PAM16Q9Y3D7 125 aa6.92□□□□□ -1.3
SIN3B-204ENST00000594372 IGLC3P0DOY3 106 aa6.91□□□□□ -1.3
SIN3B-204ENST00000594372 VPREB1P12018 145 aa6.91□□□□□ -1.3
SIN3B-204ENST00000594372 ASB16-AS1Q495Z4 193 aa6.91□□□□□ -1.3
SIN3B-204ENST00000594372 SEC11AP67812 179 aa6.9□□□□□ -1.3
SIN3B-204ENST00000594372 SPATA45Q537H7 98 aa6.9□□□□□ -1.3
SIN3B-204ENST00000594372 TMEM170BQ5T4T1 132 aa6.9□□□□□ -1.3
SIN3B-204ENST00000594372 TINCRA0A1B0GVN0 87 aa6.89□□□□□ -1.31
SIN3B-204ENST00000594372 HERVK_113P61574 105 aa6.89□□□□□ -1.31
SIN3B-204ENST00000594372 Q8NBF4 154 aa6.89□□□□□ -1.31
SIN3B-204ENST00000594372 ZNF625Q96I27 306 aaPredicted RBP6.89□□□□□ -1.31
SIN3B-204ENST00000594372 SND1-IT1Q9HBX3 110 aa6.89□□□□□ -1.31
SIN3B-204ENST00000594372 IGLV5-45A0A087WSX0 123 aa6.88□□□□□ -1.31
SIN3B-204ENST00000594372 ZNF22P17026 224 aaPredicted RBP6.88□□□□□ -1.31
SIN3B-204ENST00000594372 SPRR4Q96PI1 79 aa6.88□□□□□ -1.31
SIN3B-204ENST00000594372 H3BRM9 83 aa6.87□□□□□ -1.31
SIN3B-204ENST00000594372 ANKRD39Q53RE8 183 aa6.87□□□□□ -1.31
SIN3B-204ENST00000594372 NMUP48645 174 aa6.86□□□□□ -1.31
SIN3B-204ENST00000594372 LCE2CQ5TA81 110 aa6.86□□□□□ -1.31
SIN3B-204ENST00000594372 FP248Q71RG6 208 aaPredicted RBP6.86□□□□□ -1.31
SIN3B-204ENST00000594372 PRO1933Q9H354 126 aa6.86□□□□□ -1.31
SIN3B-204ENST00000594372 ERG28Q9UKR5 140 aa6.85□□□□□ -1.31
SIN3B-204ENST00000594372 TMEM223A0PJW6 202 aa6.84□□□□□ -1.31
SIN3B-204ENST00000594372 TSTD3H0UI37 97 aa6.84□□□□□ -1.31
SIN3B-204ENST00000594372 C4orf48Q5BLP8 95 aa6.84□□□□□ -1.31
SIN3B-204ENST00000594372 A0A0U1RRA0 63 aa6.83□□□□□ -1.32
SIN3B-204ENST00000594372 E9PLD3 99 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms