RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 TMEM250H0YL14 139 aa5.05□□□□□ -1.6
SMAD4-215ENST00000592911 HBBP68871 147 aa5.05□□□□□ -1.6
SMAD4-215ENST00000592911 KIAA0087Q14695 138 aa5.05□□□□□ -1.6
SMAD4-215ENST00000592911 VAMP3Q15836 100 aa5.05□□□□□ -1.6
SMAD4-215ENST00000592911 PMCHL1Q16048 86 aa5.05□□□□□ -1.6
SMAD4-215ENST00000592911 COX19Q49B96 90 aa5.05□□□□□ -1.6
SMAD4-215ENST00000592911 C9orf129Q5T035 196 aaKnown RBP5.05□□□□□ -1.6
SMAD4-215ENST00000592911 LINC00242Q5T6M2 205 aa5.05□□□□□ -1.6
SMAD4-215ENST00000592911 C10orf25Q5T742 122 aa5.05□□□□□ -1.6
SMAD4-215ENST00000592911 K7EN84 100 aa5.04□□□□□ -1.6
SMAD4-215ENST00000592911 ASB16-AS1Q495Z4 193 aa5.04□□□□□ -1.6
SMAD4-215ENST00000592911 Q6ZN92 141 aa5.04□□□□□ -1.6
SMAD4-215ENST00000592911 OCC1Q8TAD7 63 aa5.04□□□□□ -1.6
SMAD4-215ENST00000592911 TNFRSF6BO95407 300 aa5.03□□□□□ -1.6
SMAD4-215ENST00000592911 IGLC3P0DOY3 106 aa5.03□□□□□ -1.6
SMAD4-215ENST00000592911 SPAG11AQ6PDA7 123 aa5.03□□□□□ -1.6
SMAD4-215ENST00000592911 GTF2H5Q6ZYL4 71 aa5.03□□□□□ -1.6
SMAD4-215ENST00000592911 NRACQ8N912 160 aa5.03□□□□□ -1.6
SMAD4-215ENST00000592911 C22orf24Q9Y442 160 aa5.03□□□□□ -1.6
SMAD4-215ENST00000592911 TRAPPC1Q9Y5R8 145 aa5.03□□□□□ -1.6
SMAD4-215ENST00000592911 HIGD1CA8MV81 97 aa5.02□□□□□ -1.61
SMAD4-215ENST00000592911 RIGQ13278 110 aa5.02□□□□□ -1.61
SMAD4-215ENST00000592911 SPATA45Q537H7 98 aa5.02□□□□□ -1.61
SMAD4-215ENST00000592911 RNASE13Q5GAN3 156 aaKnown RBP5.02□□□□□ -1.61
SMAD4-215ENST00000592911 MRPL55Q7Z7F7 128 aaKnown RBP5.02□□□□□ -1.61
SMAD4-215ENST00000592911 PPDPFQ9H3Y8 114 aa5.02□□□□□ -1.61
SMAD4-215ENST00000592911 PAM16Q9Y3D7 125 aa5.02□□□□□ -1.61
SMAD4-215ENST00000592911 PYGO1Q9Y3Y4 419 aa5.02□□□□□ -1.61
SMAD4-215ENST00000592911 A0A1B0GW15 77 aa5.01□□□□□ -1.61
SMAD4-215ENST00000592911 J3QR89 54 aa5.01□□□□□ -1.61
SMAD4-215ENST00000592911 SEC61BP60468 96 aaKnown RBP5.01□□□□□ -1.61
SMAD4-215ENST00000592911 KRTAP13-2Q52LG2 175 aa5.01□□□□□ -1.61
SMAD4-215ENST00000592911 MRPL54Q6P161 138 aaKnown RBP5.01□□□□□ -1.61
SMAD4-215ENST00000592911 AMN1Q8IY45 258 aa5.01□□□□□ -1.61
SMAD4-215ENST00000592911 SMIM7Q9BQ49 75 aa5.01□□□□□ -1.61
SMAD4-215ENST00000592911 IGKV2D-26A0A0A0MRZ7 120 aa5□□□□□ -1.61
SMAD4-215ENST00000592911 IFI27P40305 119 aaPredicted RBP5□□□□□ -1.61
SMAD4-215ENST00000592911 ADIRFQ15847 76 aa5□□□□□ -1.61
SMAD4-215ENST00000592911 KRTAP13-1Q8IUC0 172 aa5□□□□□ -1.61
SMAD4-215ENST00000592911 Q8IZM0 81 aa5□□□□□ -1.61
SMAD4-215ENST00000592911 FAM104AQ969W3 186 aa5□□□□□ -1.61
SMAD4-215ENST00000592911 SIGMAR1Q99720 223 aa5□□□□□ -1.61
SMAD4-215ENST00000592911 PRSS2P07478 247 aa4.99□□□□□ -1.61
SMAD4-215ENST00000592911 CFC1BP0CG36 223 aa4.99□□□□□ -1.61
SMAD4-215ENST00000592911 CXCL5P42830 114 aa4.99□□□□□ -1.61
SMAD4-215ENST00000592911 CKS1BP61024 79 aa4.99□□□□□ -1.61
SMAD4-215ENST00000592911 LINC00337Q8N6G1 96 aa4.99□□□□□ -1.61
SMAD4-215ENST00000592911 RETNLBQ9BQ08 111 aa4.99□□□□□ -1.61
SMAD4-215ENST00000592911 PMCHL2Q9BQD1 86 aa4.99□□□□□ -1.61
SMAD4-215ENST00000592911 SMIM2Q9BVW6 85 aa4.99□□□□□ -1.61
SMAD4-215ENST00000592911 OSTCQ9NRP0 149 aa4.99□□□□□ -1.61
SMAD4-215ENST00000592911 IGLV5-37A0A075B6J1 123 aa4.98□□□□□ -1.61
SMAD4-215ENST00000592911 RPL23P62829 140 aaKnown RBP4.98□□□□□ -1.61
SMAD4-215ENST00000592911 SEC11AP67812 179 aa4.98□□□□□ -1.61
SMAD4-215ENST00000592911 FAM104BQ5XKR9 115 aa4.98□□□□□ -1.61
SMAD4-215ENST00000592911 BAGE3Q86Y29 109 aa4.98□□□□□ -1.61
SMAD4-215ENST00000592911 F8VRH5 84 aa4.97□□□□□ -1.61
SMAD4-215ENST00000592911 UBE2AP49459 152 aa4.97□□□□□ -1.61
SMAD4-215ENST00000592911 HINT1P49773 126 aaPredicted RBP4.97□□□□□ -1.61
SMAD4-215ENST00000592911 RPL39P62891 51 aaKnown RBP4.97□□□□□ -1.61
SMAD4-215ENST00000592911 C2orf82Q6UX34 121 aa4.97□□□□□ -1.61
SMAD4-215ENST00000592911 FAM19A3Q7Z5A8 133 aa4.97□□□□□ -1.61
SMAD4-215ENST00000592911 TMEM141Q96I45 108 aa4.97□□□□□ -1.61
SMAD4-215ENST00000592911 GNB1LQ9BYB4 327 aa4.97□□□□□ -1.61
SMAD4-215ENST00000592911 NAT8BQ9UHF3 227 aa4.97□□□□□ -1.61
SMAD4-215ENST00000592911 A6NDN8 102 aa4.96□□□□□ -1.62
SMAD4-215ENST00000592911 GAGE10A6NGK3 116 aa4.96□□□□□ -1.62
SMAD4-215ENST00000592911 TAX1BP3O14907 124 aa4.96□□□□□ -1.62
SMAD4-215ENST00000592911 CKS2P33552 79 aa4.96□□□□□ -1.62
SMAD4-215ENST00000592911 KRTAP13-3Q3SY46 172 aa4.96□□□□□ -1.62
SMAD4-215ENST00000592911 MRPL51Q4U2R6 128 aaKnown RBP4.96□□□□□ -1.62
SMAD4-215ENST00000592911 C6orf226Q5I0X4 101 aa4.96□□□□□ -1.62
SMAD4-215ENST00000592911 FA2HQ7L5A8 372 aa4.96□□□□□ -1.62
SMAD4-215ENST00000592911 SMKR1H3BMG3 65 aa4.95□□□□□ -1.62
SMAD4-215ENST00000592911 TRIAP1O43715 76 aa4.95□□□□□ -1.62
SMAD4-215ENST00000592911 SERF1AO75920 110 aa4.95□□□□□ -1.62
SMAD4-215ENST00000592911 KRTDAPP60985 99 aa4.95□□□□□ -1.62
SMAD4-215ENST00000592911 LINC00167Q96N53 147 aa4.95□□□□□ -1.62
SMAD4-215ENST00000592911 IGLV4-3A0A075B6K6 122 aa4.94□□□□□ -1.62
SMAD4-215ENST00000592911 K7EMI3 77 aa4.94□□□□□ -1.62
SMAD4-215ENST00000592911 RPS29P62273 56 aaKnown RBP4.94□□□□□ -1.62
SMAD4-215ENST00000592911 HERVK_113P63121 156 aa4.94□□□□□ -1.62
SMAD4-215ENST00000592911 PAPPA-AS1Q5QFB9 102 aa4.94□□□□□ -1.62
SMAD4-215ENST00000592911 FAM19A2Q8N3H0 131 aa4.94□□□□□ -1.62
SMAD4-215ENST00000592911 XAGE1AQ9HD64 81 aa4.94□□□□□ -1.62
SMAD4-215ENST00000592911 H3BRM9 83 aa4.93□□□□□ -1.62
SMAD4-215ENST00000592911 HSD52Q0P140 79 aa4.93□□□□□ -1.62
SMAD4-215ENST00000592911 KRTAP15-1Q3LI76 137 aa4.93□□□□□ -1.62
SMAD4-215ENST00000592911 BVES-AS1Q5T3Y7 98 aa4.93□□□□□ -1.62
SMAD4-215ENST00000592911 SLC25A34Q6PIV7 304 aa4.93□□□□□ -1.62
SMAD4-215ENST00000592911 AMELXQ99217 191 aa4.93□□□□□ -1.62
SMAD4-215ENST00000592911 NDUFA12Q9UI09 145 aa4.93□□□□□ -1.62
SMAD4-215ENST00000592911 V9GYV3 84 aa4.93□□□□□ -1.62
SMAD4-215ENST00000592911 K7EP34 96 aa4.92□□□□□ -1.62
SMAD4-215ENST00000592911 SPINK1P00995 79 aa4.92□□□□□ -1.62
SMAD4-215ENST00000592911 C3orf79P0CE67 100 aa4.92□□□□□ -1.62
SMAD4-215ENST00000592911 NKAPP1Q8N9T2 125 aa4.92□□□□□ -1.62
SMAD4-215ENST00000592911 VCX2Q9H322 139 aa4.92□□□□□ -1.62
SMAD4-215ENST00000592911 ANAPC11Q9NYG5 84 aa4.92□□□□□ -1.62
SMAD4-215ENST00000592911 SMIM27A0A1W2PRY6 76 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms