RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 GAGE2EQ4V326 116 aa6.98□□□□□ -1.29
SMAD4-214ENST00000592186 PLEKHB2Q96CS7 222 aa6.98□□□□□ -1.29
SMAD4-214ENST00000592186 TOMM7Q9P0U1 55 aa6.98□□□□□ -1.29
SMAD4-214ENST00000592186 GAGE2DQ9UEU5 116 aa6.98□□□□□ -1.29
SMAD4-214ENST00000592186 NDUFA1O15239 70 aa6.97□□□□□ -1.29
SMAD4-214ENST00000592186 LEPROTO15243 131 aa6.97□□□□□ -1.29
SMAD4-214ENST00000592186 SNCGO76070 127 aa6.97□□□□□ -1.29
SMAD4-214ENST00000592186 IFITM1P13164 125 aa6.97□□□□□ -1.29
SMAD4-214ENST00000592186 SYCNQ0VAF6 134 aa6.97□□□□□ -1.29
SMAD4-214ENST00000592186 CAMK2N2Q96S95 79 aa6.97□□□□□ -1.29
SMAD4-214ENST00000592186 HIST1H4GQ99525 98 aa6.97□□□□□ -1.29
SMAD4-214ENST00000592186 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.96□□□□□ -1.3
SMAD4-214ENST00000592186 SMIM20Q8N5G0 67 aa6.96□□□□□ -1.3
SMAD4-214ENST00000592186 PKIGQ9Y2B9 76 aa6.96□□□□□ -1.3
SMAD4-214ENST00000592186 IGKV2D-26A0A0A0MRZ7 120 aa6.95□□□□□ -1.3
SMAD4-214ENST00000592186 IGLV5-52A0A0A0MRZ9 124 aa6.95□□□□□ -1.3
SMAD4-214ENST00000592186 MYMXA0A1B0GTQ4 84 aa6.95□□□□□ -1.3
SMAD4-214ENST00000592186 C5orf47Q569G3 176 aa6.95□□□□□ -1.3
SMAD4-214ENST00000592186 LINC00526Q96FQ7 95 aa6.95□□□□□ -1.3
SMAD4-214ENST00000592186 CARD19Q96LW7 228 aa6.95□□□□□ -1.3
SMAD4-214ENST00000592186 TRBV30A0A0K0K1B3 111 aa6.94□□□□□ -1.3
SMAD4-214ENST00000592186 A0A1B0GVY2 172 aa6.94□□□□□ -1.3
SMAD4-214ENST00000592186 J3QQQ9 107 aa6.94□□□□□ -1.3
SMAD4-214ENST00000592186 SLPIP03973 132 aa6.94□□□□□ -1.3
SMAD4-214ENST00000592186 LGALS3P17931 250 aaKnown RBP6.94□□□□□ -1.3
SMAD4-214ENST00000592186 C9orf163Q8N9P6 203 aa6.94□□□□□ -1.3
SMAD4-214ENST00000592186 RYR3Q15413 4870 aa6.93□□□□□ -1.3
SMAD4-214ENST00000592186 FAM240AA0A1B0GVK7 77 aa6.93□□□□□ -1.3
SMAD4-214ENST00000592186 RPL13AP40429 203 aaKnown RBP6.93□□□□□ -1.3
SMAD4-214ENST00000592186 C2orf82Q6UX34 121 aa6.93□□□□□ -1.3
SMAD4-214ENST00000592186 UNQ6190/PRO20217Q6UXQ8 127 aa6.93□□□□□ -1.3
SMAD4-214ENST00000592186 Q6ZRU5 148 aa6.93□□□□□ -1.3
SMAD4-214ENST00000592186 DNAH2Q9P225 4427 aa6.93□□□□□ -1.3
SMAD4-214ENST00000592186 KRTAP10-2P60368 255 aa6.92□□□□□ -1.3
SMAD4-214ENST00000592186 NDUFA12Q9UI09 145 aa6.92□□□□□ -1.3
SMAD4-214ENST00000592186 A0A1B0GX51 115 aa6.91□□□□□ -1.3
SMAD4-214ENST00000592186 SCGB1C2P0DMR2 95 aa6.91□□□□□ -1.3
SMAD4-214ENST00000592186 COX17Q14061 63 aa6.91□□□□□ -1.3
SMAD4-214ENST00000592186 C10orf25Q5T742 122 aa6.91□□□□□ -1.3
SMAD4-214ENST00000592186 ZNF625Q96I27 306 aaPredicted RBP6.91□□□□□ -1.3
SMAD4-214ENST00000592186 LOC107984640A0A0U1RRK4 108 aa6.9□□□□□ -1.3
SMAD4-214ENST00000592186 TLX1NBP0CAT3 122 aa6.9□□□□□ -1.3
SMAD4-214ENST00000592186 ANKRD29Q8N6D5 301 aa6.9□□□□□ -1.3
SMAD4-214ENST00000592186 LINC00474Q9P2X8 69 aa6.9□□□□□ -1.3
SMAD4-214ENST00000592186 C6orf48Q9UBA6 75 aa6.9□□□□□ -1.3
SMAD4-214ENST00000592186 DNAH17Q9UFH2 4485 aa6.89□□□□□ -1.31
SMAD4-214ENST00000592186 CCDC179H3BU77 68 aa6.89□□□□□ -1.31
SMAD4-214ENST00000592186 PSMB2P49721 201 aa6.89□□□□□ -1.31
SMAD4-214ENST00000592186 CIRBPQ14011 172 aaKnown RBP6.89□□□□□ -1.31
SMAD4-214ENST00000592186 SDIM1Q6ZPB5 146 aa6.89□□□□□ -1.31
SMAD4-214ENST00000592186 IMUPQ9GZP8 106 aa6.89□□□□□ -1.31
SMAD4-214ENST00000592186 DNAH10Q8IVF4 4471 aa6.89□□□□□ -1.31
SMAD4-214ENST00000592186 TRBV7-7A0A0K0K1E9 115 aa6.88□□□□□ -1.31
SMAD4-214ENST00000592186 C16orf90A8MZG2 172 aa6.88□□□□□ -1.31
SMAD4-214ENST00000592186 NDUFC2-KCTD14E9PQ53 114 aa6.88□□□□□ -1.31
SMAD4-214ENST00000592186 TSPEAR-AS2P59090 65 aa6.88□□□□□ -1.31
SMAD4-214ENST00000592186 ZNF815PA8K554 130 aa6.87□□□□□ -1.31
SMAD4-214ENST00000592186 FRAS1Q86XX4 4008 aa6.87□□□□□ -1.31
SMAD4-214ENST00000592186 J3KT08 172 aa6.86□□□□□ -1.31
SMAD4-214ENST00000592186 SLC25A20O43772 301 aa6.86□□□□□ -1.31
SMAD4-214ENST00000592186 TCL1BO95988 128 aa6.86□□□□□ -1.31
SMAD4-214ENST00000592186 C9orf116Q5BN46 136 aaPredicted RBP6.86□□□□□ -1.31
SMAD4-214ENST00000592186 MEIG1Q5JSS6 88 aa6.86□□□□□ -1.31
SMAD4-214ENST00000592186 LOC107984156A0A0G2JMH3 177 aa6.85□□□□□ -1.31
SMAD4-214ENST00000592186 A0A0J9YXY3 114 aa6.85□□□□□ -1.31
SMAD4-214ENST00000592186 PFN2P35080 140 aa6.85□□□□□ -1.31
SMAD4-214ENST00000592186 FUSP35637 526 aaKnown RBP eCLIP6.85□□□□□ -1.31
SMAD4-214ENST00000592186 LINC00158P58513 81 aa6.85□□□□□ -1.31
SMAD4-214ENST00000592186 ARL17AQ8IVW1 177 aa6.85□□□□□ -1.31
SMAD4-214ENST00000592186 DPH3Q96FX2 82 aa6.85□□□□□ -1.31
SMAD4-214ENST00000592186 TTTY13Q9BZ97 58 aa6.85□□□□□ -1.31
SMAD4-214ENST00000592186 A0A0B4J2C4 111 aa6.84□□□□□ -1.31
SMAD4-214ENST00000592186 H3BT86 120 aa6.84□□□□□ -1.31
SMAD4-214ENST00000592186 TIMM17BO60830 172 aa6.84□□□□□ -1.31
SMAD4-214ENST00000592186 RPS28P62857 69 aaKnown RBP6.84□□□□□ -1.31
SMAD4-214ENST00000592186 RPL18AQ02543 176 aaKnown RBP6.84□□□□□ -1.31
SMAD4-214ENST00000592186 ATXN8Q156A1 80 aa6.84□□□□□ -1.31
SMAD4-214ENST00000592186 LINC01620Q4KN68 170 aa6.84□□□□□ -1.31
SMAD4-214ENST00000592186 SCGB1D4Q6XE38 83 aa6.84□□□□□ -1.31
SMAD4-214ENST00000592186 FAT2Q9NYQ8 4349 aa6.84□□□□□ -1.32
SMAD4-214ENST00000592186 ACYP1P07311 99 aa6.83□□□□□ -1.32
SMAD4-214ENST00000592186 KRTAP10-1P60331 282 aa6.83□□□□□ -1.32
SMAD4-214ENST00000592186 Q6ZRP5 223 aa6.83□□□□□ -1.32
SMAD4-214ENST00000592186 OR13C6PQ8NH95 151 aa6.83□□□□□ -1.32
SMAD4-214ENST00000592186 A0A096LNI7 61 aa6.82□□□□□ -1.32
SMAD4-214ENST00000592186 TRBV10-2A0A0K0K1G8 114 aa6.82□□□□□ -1.32
SMAD4-214ENST00000592186 PRO1854Q9UHT4 67 aa6.82□□□□□ -1.32
SMAD4-214ENST00000592186 PKD1P98161 4303 aa6.82□□□□□ -1.32
SMAD4-214ENST00000592186 IGKV2-24A0A0C4DH68 120 aa6.81□□□□□ -1.32
SMAD4-214ENST00000592186 UQCRQO14949 82 aa6.81□□□□□ -1.32
SMAD4-214ENST00000592186 SRSF9Q13242 221 aaKnown RBP eCLIP6.81□□□□□ -1.32
SMAD4-214ENST00000592186 Q6ZSA8 131 aa6.81□□□□□ -1.32
SMAD4-214ENST00000592186 COPS9Q8WXC6 57 aa6.81□□□□□ -1.32
SMAD4-214ENST00000592186 GHRHP01286 108 aa6.8□□□□□ -1.32
SMAD4-214ENST00000592186 MIR7-3HGQ8N6C7 128 aa6.8□□□□□ -1.32
SMAD4-214ENST00000592186 SPACA4Q8TDM5 124 aa6.8□□□□□ -1.32
SMAD4-214ENST00000592186 SND1-IT1Q9HBX3 110 aa6.8□□□□□ -1.32
SMAD4-214ENST00000592186 A0A0U1RRA0 63 aa6.79□□□□□ -1.32
SMAD4-214ENST00000592186 C3orf22Q8N5N4 141 aa6.79□□□□□ -1.32
SMAD4-214ENST00000592186 PPDPFQ9H3Y8 114 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms