RNA–Protein interactions for RNA: ENST00000577988.2

SNORD3B-1-201, Transcript of small nucleolar RNA, C/D box 3B-1, humanhuman

BASIC

Gene SNORD3B-1, Length 758 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3B-1-201ENST00000577988 KRTDAPP60985 99 aa8.62□□□□□ -1.03
SNORD3B-1-201ENST00000577988 SND1-IT1Q9HBX3 110 aa8.62□□□□□ -1.03
SNORD3B-1-201ENST00000577988 C22orf24Q9Y442 160 aa8.62□□□□□ -1.03
SNORD3B-1-201ENST00000577988 LGALS3P17931 250 aaKnown RBP8.61□□□□□ -1.03
SNORD3B-1-201ENST00000577988 SERTAD4-AS1Q5TG53 156 aa8.61□□□□□ -1.03
SNORD3B-1-201ENST00000577988 HIST3H2BBQ8N257 126 aa8.61□□□□□ -1.03
SNORD3B-1-201ENST00000577988 UBE2BP63146 152 aa8.6□□□□□ -1.03
SNORD3B-1-201ENST00000577988 RPL24P83731 157 aaKnown RBP8.6□□□□□ -1.03
SNORD3B-1-201ENST00000577988 MEIG1Q5JSS6 88 aa8.6□□□□□ -1.03
SNORD3B-1-201ENST00000577988 PSORS1C2Q9UIG4 136 aa8.6□□□□□ -1.03
SNORD3B-1-201ENST00000577988 MRPL55Q7Z7F7 128 aaKnown RBP8.59□□□□□ -1.03
SNORD3B-1-201ENST00000577988 SMIM13P0DJ93 91 aa8.58□□□□□ -1.04
SNORD3B-1-201ENST00000577988 TSPEAR-AS2P59090 65 aa8.58□□□□□ -1.04
SNORD3B-1-201ENST00000577988 SPINK6Q6UWN8 80 aa8.58□□□□□ -1.04
SNORD3B-1-201ENST00000577988 NKAPP1Q8N9T2 125 aa8.58□□□□□ -1.04
SNORD3B-1-201ENST00000577988 PCP4L1A6NKN8 68 aa8.57□□□□□ -1.04
SNORD3B-1-201ENST00000577988 OXTP01178 125 aa8.57□□□□□ -1.04
SNORD3B-1-201ENST00000577988 HNRNPA3P51991 378 aaKnown RBP8.57□□□□□ -1.04
SNORD3B-1-201ENST00000577988 SRSF9Q13242 221 aaKnown RBP eCLIP8.57□□□□□ -1.04
SNORD3B-1-201ENST00000577988 C1orf137Q5JT78 98 aa8.57□□□□□ -1.04
SNORD3B-1-201ENST00000577988 HIST1H2BLQ99880 126 aa8.57□□□□□ -1.04
SNORD3B-1-201ENST00000577988 KRTAP29-1A8MX34 341 aaPredicted RBP8.56□□□□□ -1.04
SNORD3B-1-201ENST00000577988 MIR7-3HGQ8N6C7 128 aa8.56□□□□□ -1.04
SNORD3B-1-201ENST00000577988 LOC107984156A0A0G2JMH3 177 aa8.55□□□□□ -1.04
SNORD3B-1-201ENST00000577988 A0A0U1RRA0 63 aa8.55□□□□□ -1.04
SNORD3B-1-201ENST00000577988 VPREB1P12018 145 aa8.55□□□□□ -1.04
SNORD3B-1-201ENST00000577988 ARL17AQ8IVW1 177 aa8.55□□□□□ -1.04
SNORD3B-1-201ENST00000577988 LINC00167Q96N53 147 aa8.55□□□□□ -1.04
SNORD3B-1-201ENST00000577988 ABCA13Q86UQ4 5058 aa8.54□□□□□ -1.04
SNORD3B-1-201ENST00000577988 IGLV7-43P04211 117 aa8.54□□□□□ -1.04
SNORD3B-1-201ENST00000577988 PYY3Q5JQD4 70 aa8.54□□□□□ -1.04
SNORD3B-1-201ENST00000577988 KRTAP11-1Q8IUC1 163 aa8.54□□□□□ -1.04
SNORD3B-1-201ENST00000577988 A0A0J9YXY3 114 aa8.52□□□□□ -1.05
SNORD3B-1-201ENST00000577988 PCLOQ9Y6V0 5065 aa8.52□□□□□ -1.05
SNORD3B-1-201ENST00000577988 IGKV2D-26A0A0A0MRZ7 120 aa8.51□□□□□ -1.05
SNORD3B-1-201ENST00000577988 M0R378 163 aa8.51□□□□□ -1.05
SNORD3B-1-201ENST00000577988 TIMM17BO60830 172 aa8.51□□□□□ -1.05
SNORD3B-1-201ENST00000577988 CTAG1AP78358 180 aa8.51□□□□□ -1.05
SNORD3B-1-201ENST00000577988 REG3GQ6UW15 175 aa8.51□□□□□ -1.05
SNORD3B-1-201ENST00000577988 BOD1L2Q8IYS8 172 aa8.51□□□□□ -1.05
SNORD3B-1-201ENST00000577988 IGLV1-50A0A075B6I6 118 aa8.5□□□□□ -1.05
SNORD3B-1-201ENST00000577988 RPL37AP8A6NKH3 93 aa8.5□□□□□ -1.05
SNORD3B-1-201ENST00000577988 ZNF815PA8K554 130 aa8.5□□□□□ -1.05
SNORD3B-1-201ENST00000577988 J3QL48 77 aa8.5□□□□□ -1.05
SNORD3B-1-201ENST00000577988 JOSD1Q15040 202 aaPredicted RBP8.5□□□□□ -1.05
SNORD3B-1-201ENST00000577988 DIRC1Q969H9 104 aa8.5□□□□□ -1.05
SNORD3B-1-201ENST00000577988 MIEN1Q9BRT3 115 aa8.5□□□□□ -1.05
SNORD3B-1-201ENST00000577988 GAGE10A6NGK3 116 aa8.49□□□□□ -1.05
SNORD3B-1-201ENST00000577988 BCE1O60756 84 aa8.49□□□□□ -1.05
SNORD3B-1-201ENST00000577988 PKHD1L1Q86WI1 4243 aa8.49□□□□□ -1.05
SNORD3B-1-201ENST00000577988 HSBP1L1C9JCN9 74 aa8.48□□□□□ -1.05
SNORD3B-1-201ENST00000577988 ZNF861PO60384 105 aa8.48□□□□□ -1.05
SNORD3B-1-201ENST00000577988 DMBT1Q9UGM3 2413 aaPredicted RBP8.47□□□□□ -1.05
SNORD3B-1-201ENST00000577988 TRBV10-2A0A0K0K1G8 114 aa8.47□□□□□ -1.05
SNORD3B-1-201ENST00000577988 NDUFC2O95298 119 aa8.47□□□□□ -1.05
SNORD3B-1-201ENST00000577988 RPL28P46779 137 aaKnown RBP8.47□□□□□ -1.05
SNORD3B-1-201ENST00000577988 ANKRD39Q53RE8 183 aa8.47□□□□□ -1.05
SNORD3B-1-201ENST00000577988 ATOH7Q8N100 152 aa8.47□□□□□ -1.05
SNORD3B-1-201ENST00000577988 Q8NDZ9 215 aa8.47□□□□□ -1.05
SNORD3B-1-201ENST00000577988 DAND5Q8N907 189 aa8.46□□□□□ -1.06
SNORD3B-1-201ENST00000577988 IGKV2-28A0A075B6P5 120 aa8.45□□□□□ -1.06
SNORD3B-1-201ENST00000577988 H0Y9J4 135 aa8.45□□□□□ -1.06
SNORD3B-1-201ENST00000577988 IGKV2D-28P01615 120 aa8.45□□□□□ -1.06
SNORD3B-1-201ENST00000577988 ADAMTSL4-AS1Q5T5F5 129 aa8.45□□□□□ -1.06
SNORD3B-1-201ENST00000577988 LINC01600Q96MT4 127 aa8.45□□□□□ -1.06
SNORD3B-1-201ENST00000577988 LITAFQ99732 161 aa8.45□□□□□ -1.06
SNORD3B-1-201ENST00000577988 SCGB1D1O95968 90 aa8.44□□□□□ -1.06
SNORD3B-1-201ENST00000577988 SCGB1D4Q6XE38 83 aa8.44□□□□□ -1.06
SNORD3B-1-201ENST00000577988 COPS9Q8WXC6 57 aa8.44□□□□□ -1.06
SNORD3B-1-201ENST00000577988 SPANXB1Q9NS25 103 aaPredicted RBP8.44□□□□□ -1.06
SNORD3B-1-201ENST00000577988 TMEM238C9JI98 176 aa8.43□□□□□ -1.06
SNORD3B-1-201ENST00000577988 Q6ZVH6 145 aa8.43□□□□□ -1.06
SNORD3B-1-201ENST00000577988 TTTY13Q9BZ97 58 aa8.43□□□□□ -1.06
SNORD3B-1-201ENST00000577988 TMEM126AQ9H061 195 aa8.43□□□□□ -1.06
SNORD3B-1-201ENST00000577988 PRYO14603 147 aa8.42□□□□□ -1.06
SNORD3B-1-201ENST00000577988 NCR3O14931 201 aa8.42□□□□□ -1.06
SNORD3B-1-201ENST00000577988 UBE2AP49459 152 aa8.42□□□□□ -1.06
SNORD3B-1-201ENST00000577988 LINC00308Q8TCZ7 52 aa8.42□□□□□ -1.06
SNORD3B-1-201ENST00000577988 PPDPFQ9H3Y8 114 aa8.42□□□□□ -1.06
SNORD3B-1-201ENST00000577988 KCNQ1DNQ9H478 68 aa8.42□□□□□ -1.06
SNORD3B-1-201ENST00000577988 MYCBP2O75592 4640 aa8.42□□□□□ -1.06
SNORD3B-1-201ENST00000577988 IFITM1P13164 125 aa8.41□□□□□ -1.06
SNORD3B-1-201ENST00000577988 SOSTDC1Q6X4U4 206 aa8.41□□□□□ -1.06
SNORD3B-1-201ENST00000577988 KRTAP13-1Q8IUC0 172 aa8.41□□□□□ -1.06
SNORD3B-1-201ENST00000577988 PCP2Q8IVA1 136 aa8.41□□□□□ -1.06
SNORD3B-1-201ENST00000577988 SPANXDQ9BXN6 97 aa8.41□□□□□ -1.06
SNORD3B-1-201ENST00000577988 SPANXCQ9NY87 97 aa8.41□□□□□ -1.06
SNORD3B-1-201ENST00000577988 CBY1Q9Y3M2 126 aa8.41□□□□□ -1.06
SNORD3B-1-201ENST00000577988 TSTD3H0UI37 97 aa8.4□□□□□ -1.06
SNORD3B-1-201ENST00000577988 TRBV10-3A0A0K0K1G6 114 aa8.39□□□□□ -1.07
SNORD3B-1-201ENST00000577988 MT1HL1P0DM35 61 aa8.39□□□□□ -1.07
SNORD3B-1-201ENST00000577988 DDTP30046 118 aa8.39□□□□□ -1.07
SNORD3B-1-201ENST00000577988 SPRR1AP35321 89 aa8.39□□□□□ -1.07
SNORD3B-1-201ENST00000577988 FAM19A1Q7Z5A9 133 aa8.39□□□□□ -1.07
SNORD3B-1-201ENST00000577988 LINC00337Q8N6G1 96 aa8.39□□□□□ -1.07
SNORD3B-1-201ENST00000577988 EIF4EBP3O60516 100 aaPredicted RBP8.38□□□□□ -1.07
SNORD3B-1-201ENST00000577988 KRTAP10-8P60410 259 aa8.38□□□□□ -1.07
SNORD3B-1-201ENST00000577988 NPC2P61916 151 aa8.38□□□□□ -1.07
SNORD3B-1-201ENST00000577988 S100A7L2Q5SY68 101 aa8.38□□□□□ -1.07
SNORD3B-1-201ENST00000577988 IGLV6-57P01721 117 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms