RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 IGHV3-38A0A0C4DH36 116 aa4.65□□□□□ -1.66
SMG1-217ENST00000569764 IGHV3-53P01767 116 aa4.65□□□□□ -1.66
SMG1-217ENST00000569764 UBE2D3P61077 147 aa4.65□□□□□ -1.66
SMG1-217ENST00000569764 UBE2D2P62837 147 aa4.65□□□□□ -1.66
SMG1-217ENST00000569764 NOTCH1P46531 2555 aa4.65□□□□□ -1.67
SMG1-217ENST00000569764 IGLV2-18A0A075B6J9 118 aa4.65□□□□□ -1.67
SMG1-217ENST00000569764 TRAV13-2A0A0B4J235 113 aa4.65□□□□□ -1.67
SMG1-217ENST00000569764 NDUFC1O43677 76 aa4.65□□□□□ -1.67
SMG1-217ENST00000569764 PRO1854Q9UHT4 67 aa4.65□□□□□ -1.67
SMG1-217ENST00000569764 TSPEAR-AS2P59090 65 aa4.64□□□□□ -1.67
SMG1-217ENST00000569764 CHKB-CPT1BH3BT56 60 aa4.64□□□□□ -1.67
SMG1-217ENST00000569764 URB1-AS1Q96HZ7 61 aa4.64□□□□□ -1.67
SMG1-217ENST00000569764 COL7A1Q02388 2944 aa4.64□□□□□ -1.67
SMG1-217ENST00000569764 DNAL4O96015 105 aa4.64□□□□□ -1.67
SMG1-217ENST00000569764 CRIP1P50238 77 aa4.64□□□□□ -1.67
SMG1-217ENST00000569764 IGLV5-52A0A0A0MRZ9 124 aa4.64□□□□□ -1.67
SMG1-217ENST00000569764 IGKV3D-7A0A0C4DH55 119 aa4.64□□□□□ -1.67
SMG1-217ENST00000569764 GNRH2O43555 120 aa4.64□□□□□ -1.67
SMG1-217ENST00000569764 HCG22E2RYF7 251 aa4.63□□□□□ -1.67
SMG1-217ENST00000569764 DEFB4AO15263 64 aa4.63□□□□□ -1.67
SMG1-217ENST00000569764 LYPD5Q6UWN5 251 aa4.63□□□□□ -1.67
SMG1-217ENST00000569764 DHRS4-AS1Q9P1J3 65 aa4.63□□□□□ -1.67
SMG1-217ENST00000569764 DEFB1P60022 68 aa4.63□□□□□ -1.67
SMG1-217ENST00000569764 SDIM1Q6ZPB5 146 aa4.63□□□□□ -1.67
SMG1-217ENST00000569764 DKK2Q9UBU2 259 aa4.63□□□□□ -1.67
SMG1-217ENST00000569764 ZNF815PA8K554 130 aa4.63□□□□□ -1.67
SMG1-217ENST00000569764 KRTAP10-11P60412 298 aa4.63□□□□□ -1.67
SMG1-217ENST00000569764 KLK9Q2XQG4 91 aa4.63□□□□□ -1.67
SMG1-217ENST00000569764 LUZP6Q538Z0 58 aa4.63□□□□□ -1.67
SMG1-217ENST00000569764 KLK9Q9UKQ9 250 aa4.63□□□□□ -1.67
SMG1-217ENST00000569764 AGRNO00468 2067 aa4.63□□□□□ -1.67
SMG1-217ENST00000569764 PRAC2D3DTV9 90 aa4.62□□□□□ -1.67
SMG1-217ENST00000569764 Q6ZRP5 223 aa4.62□□□□□ -1.67
SMG1-217ENST00000569764 IGKV3D-20A0A0C4DH25 116 aa4.62□□□□□ -1.67
SMG1-217ENST00000569764 HIGD1CA8MV81 97 aa4.62□□□□□ -1.67
SMG1-217ENST00000569764 H7BZZ5 65 aa4.62□□□□□ -1.67
SMG1-217ENST00000569764 IGKV2D-26A0A0A0MRZ7 120 aa4.62□□□□□ -1.67
SMG1-217ENST00000569764 ANGP03950 147 aaKnown RBP4.62□□□□□ -1.67
SMG1-217ENST00000569764 Q6ZTC4 211 aa4.62□□□□□ -1.67
SMG1-217ENST00000569764 DNAH1Q9P2D7 4330 aa4.62□□□□□ -1.67
SMG1-217ENST00000569764 HIVEP1P15822 2718 aa4.62□□□□□ -1.67
SMG1-217ENST00000569764 SMIM27A0A1W2PRY6 76 aa4.61□□□□□ -1.67
SMG1-217ENST00000569764 TMEM141Q96I45 108 aa4.61□□□□□ -1.67
SMG1-217ENST00000569764 C19orf71A6NCJ1 209 aa4.61□□□□□ -1.67
SMG1-217ENST00000569764 RPL28P46779 137 aaKnown RBP4.61□□□□□ -1.67
SMG1-217ENST00000569764 FRAS1Q86XX4 4008 aa4.61□□□□□ -1.67
SMG1-217ENST00000569764 IGKV2-40A0A087WW87 121 aaPredicted RBP4.61□□□□□ -1.67
SMG1-217ENST00000569764 NBDYA0A0U1RRE5 68 aa4.61□□□□□ -1.67
SMG1-217ENST00000569764 LRCOL1A6NCL2 159 aa4.61□□□□□ -1.67
SMG1-217ENST00000569764 IGKV2D-40P01614 121 aaPredicted RBP4.61□□□□□ -1.67
SMG1-217ENST00000569764 LELP1Q5T871 98 aa4.61□□□□□ -1.67
SMG1-217ENST00000569764 SNURFQ9Y675 71 aa4.61□□□□□ -1.67
SMG1-217ENST00000569764 KRTAP10-3P60369 221 aa4.61□□□□□ -1.67
SMG1-217ENST00000569764 FAM229BQ4G0N7 80 aa4.61□□□□□ -1.67
SMG1-217ENST00000569764 Q8TAT8 98 aa4.61□□□□□ -1.67
SMG1-217ENST00000569764 MRPL35Q9NZE8 188 aaKnown RBP4.61□□□□□ -1.67
SMG1-217ENST00000569764 A6NN06 94 aa4.6□□□□□ -1.67
SMG1-217ENST00000569764 SH2D1AO60880 128 aa4.6□□□□□ -1.67
SMG1-217ENST00000569764 CFC1BP0CG36 223 aa4.6□□□□□ -1.67
SMG1-217ENST00000569764 CFC1P0CG37 223 aa4.6□□□□□ -1.67
SMG1-217ENST00000569764 SYCNQ0VAF6 134 aa4.6□□□□□ -1.67
SMG1-217ENST00000569764 Q86TA4 180 aa4.6□□□□□ -1.67
SMG1-217ENST00000569764 TIMM21Q9BVV7 248 aa4.6□□□□□ -1.67
SMG1-217ENST00000569764 TRBV6-4A0A1B0GX49 114 aa4.6□□□□□ -1.67
SMG1-217ENST00000569764 MIAQ16674 131 aa4.6□□□□□ -1.67
SMG1-217ENST00000569764 C9orf47Q6ZRZ4 202 aa4.59□□□□□ -1.67
SMG1-217ENST00000569764 NBEAL1Q6ZS30 2694 aa4.59□□□□□ -1.67
SMG1-217ENST00000569764 TRBV7-3A0A075B6L6 115 aa4.59□□□□□ -1.68
SMG1-217ENST00000569764 NSD1Q96L73 2696 aaPredicted RBP4.59□□□□□ -1.68
SMG1-217ENST00000569764 MRPL51Q4U2R6 128 aaKnown RBP4.58□□□□□ -1.68
SMG1-217ENST00000569764 TRAV23DV6A0A075B6W5 121 aa4.58□□□□□ -1.68
SMG1-217ENST00000569764 IGKV3OR2-268A0A0C4DH90 116 aa4.58□□□□□ -1.68
SMG1-217ENST00000569764 LINC01547P58512 204 aaPredicted RBP4.58□□□□□ -1.68
SMG1-217ENST00000569764 LINC00467Q9BRT7 94 aa4.58□□□□□ -1.68
SMG1-217ENST00000569764 A8MU10 97 aa4.57□□□□□ -1.68
SMG1-217ENST00000569764 A0A087WVE0 104 aa4.57□□□□□ -1.68
SMG1-217ENST00000569764 K7ERS5 55 aa4.57□□□□□ -1.68
SMG1-217ENST00000569764 PRR9Q5T870 116 aa4.57□□□□□ -1.68
SMG1-217ENST00000569764 PKD1L1Q8TDX9 2849 aa4.57□□□□□ -1.68
SMG1-217ENST00000569764 GAS8-AS1O95177 125 aa4.57□□□□□ -1.68
SMG1-217ENST00000569764 TMEM223A0PJW6 202 aa4.56□□□□□ -1.68
SMG1-217ENST00000569764 UBE2D1P51668 147 aa4.56□□□□□ -1.68
SMG1-217ENST00000569764 WFDC10AQ9H1F0 79 aa4.56□□□□□ -1.68
SMG1-217ENST00000569764 C8orf17Q9NRJ1 99 aa4.56□□□□□ -1.68
SMG1-217ENST00000569764 IGHV3-30P01768 117 aa4.56□□□□□ -1.68
SMG1-217ENST00000569764 IGHV3-33P01772 117 aa4.56□□□□□ -1.68
SMG1-217ENST00000569764 ARMS2P0C7Q2 107 aa4.56□□□□□ -1.68
SMG1-217ENST00000569764 IGHV3-30-3P0DP02 117 aa4.56□□□□□ -1.68
SMG1-217ENST00000569764 IGHV3-30-5P0DP03 117 aa4.56□□□□□ -1.68
SMG1-217ENST00000569764 RPP21Q9H633 154 aaKnown RBP4.56□□□□□ -1.68
SMG1-217ENST00000569764 NBEAL2Q6ZNJ1 2754 aa4.56□□□□□ -1.68
SMG1-217ENST00000569764 C20orf203Q8NBC4 194 aa4.56□□□□□ -1.68
SMG1-217ENST00000569764 FBN1P35555 2871 aaKnown RBP4.55□□□□□ -1.68
SMG1-217ENST00000569764 SOCS3O14543 225 aa4.55□□□□□ -1.68
SMG1-217ENST00000569764 PLNP26678 52 aa4.55□□□□□ -1.68
SMG1-217ENST00000569764 TRAV7A0A075B6U4 112 aa4.55□□□□□ -1.68
SMG1-217ENST00000569764 IBA57-AS1B1ANH7 110 aa4.55□□□□□ -1.68
SMG1-217ENST00000569764 Q6JHZ5 121 aa4.55□□□□□ -1.68
SMG1-217ENST00000569764 Q6ZSN1 163 aa4.55□□□□□ -1.68
SMG1-217ENST00000569764 H7C423 109 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms