RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 MTORP42345 2549 aa3.78□□□□□ -1.8
LINC01541-202ENST00000568095 Q8N814 137 aa3.78□□□□□ -1.8
LINC01541-202ENST00000568095 TRAV23DV6A0A075B6W5 121 aa3.78□□□□□ -1.8
LINC01541-202ENST00000568095 LOC110117498A0A087WWA1 95 aa3.78□□□□□ -1.8
LINC01541-202ENST00000568095 IGHV3OR16-9A0A0B4J2B5 98 aa3.78□□□□□ -1.8
LINC01541-202ENST00000568095 TMEM256-PLSCR3K7ERE1 68 aa3.78□□□□□ -1.8
LINC01541-202ENST00000568095 SLPIP03973 132 aa3.78□□□□□ -1.8
LINC01541-202ENST00000568095 ENHOQ6UWT2 76 aa3.78□□□□□ -1.8
LINC01541-202ENST00000568095 C20orf197Q8N268 126 aa3.77□□□□□ -1.81
LINC01541-202ENST00000568095 A0A087WZ39 114 aa3.77□□□□□ -1.81
LINC01541-202ENST00000568095 SMIM26A0A096LP01 95 aa3.77□□□□□ -1.81
LINC01541-202ENST00000568095 WFDC9Q8NEX5 89 aa3.77□□□□□ -1.81
LINC01541-202ENST00000568095 DEFB131AP59861 70 aa3.77□□□□□ -1.81
LINC01541-202ENST00000568095 Q6ZQT0 140 aa3.77□□□□□ -1.81
LINC01541-202ENST00000568095 HTN1P15515 57 aa3.76□□□□□ -1.81
LINC01541-202ENST00000568095 Q75L30 129 aa3.76□□□□□ -1.81
LINC01541-202ENST00000568095 HIVEP2P31629 2446 aa3.76□□□□□ -1.81
LINC01541-202ENST00000568095 INSP01308 110 aa3.76□□□□□ -1.81
LINC01541-202ENST00000568095 SLURP1P55000 103 aa3.76□□□□□ -1.81
LINC01541-202ENST00000568095 LINC00158P58513 81 aa3.76□□□□□ -1.81
LINC01541-202ENST00000568095 DEFB136Q30KP8 78 aa3.76□□□□□ -1.81
LINC01541-202ENST00000568095 UBL5Q9BZL1 73 aa3.76□□□□□ -1.81
LINC01541-202ENST00000568095 DYNC2H1Q8NCM8 4307 aaKnown RBP3.76□□□□□ -1.81
LINC01541-202ENST00000568095 ATP5EP56381 51 aaPredicted RBP3.75□□□□□ -1.81
LINC01541-202ENST00000568095 CXCL6P80162 114 aa3.75□□□□□ -1.81
LINC01541-202ENST00000568095 MAP6D1Q9H9H5 199 aa3.75□□□□□ -1.81
LINC01541-202ENST00000568095 NDUFC1O43677 76 aa3.75□□□□□ -1.81
LINC01541-202ENST00000568095 C9orf66Q5T8R8 295 aa3.75□□□□□ -1.81
LINC01541-202ENST00000568095 C6orf223Q8N319 242 aa3.75□□□□□ -1.81
LINC01541-202ENST00000568095 HUWE1Q7Z6Z7 4374 aaKnown RBP3.75□□□□□ -1.81
LINC01541-202ENST00000568095 TRBV7-4A0A0J9YYF1 115 aa3.75□□□□□ -1.81
LINC01541-202ENST00000568095 LINC01547P58512 204 aaPredicted RBP3.75□□□□□ -1.81
LINC01541-202ENST00000568095 C1orf158Q8N1D5 194 aa3.75□□□□□ -1.81
LINC01541-202ENST00000568095 F8P00451 2351 aa3.74□□□□□ -1.81
LINC01541-202ENST00000568095 TRAV10A0A0B4J240 114 aa3.74□□□□□ -1.81
LINC01541-202ENST00000568095 C2CD3Q4AC94 2353 aa3.74□□□□□ -1.81
LINC01541-202ENST00000568095 PAX4O43316 350 aa3.74□□□□□ -1.81
LINC01541-202ENST00000568095 ERC2-IT1O76042 136 aa3.74□□□□□ -1.81
LINC01541-202ENST00000568095 DNAH7Q8WXX0 4024 aa3.73□□□□□ -1.81
LINC01541-202ENST00000568095 Q6ZTI0 123 aa3.73□□□□□ -1.81
LINC01541-202ENST00000568095 FLNBO75369 2602 aaKnown RBP3.73□□□□□ -1.81
LINC01541-202ENST00000568095 DNAH9Q9NYC9 4486 aa3.73□□□□□ -1.81
LINC01541-202ENST00000568095 TEP1Q99973 2627 aaKnown RBP3.73□□□□□ -1.81
LINC01541-202ENST00000568095 IGLV4-60A0A075B6I1 120 aa3.73□□□□□ -1.81
LINC01541-202ENST00000568095 TRBV7-6A0A0J9YX20 115 aa3.73□□□□□ -1.81
LINC01541-202ENST00000568095 UBE2L6O14933 153 aa3.73□□□□□ -1.81
LINC01541-202ENST00000568095 LINC00575Q6W349 94 aa3.73□□□□□ -1.81
LINC01541-202ENST00000568095 Q8IZM0 81 aa3.73□□□□□ -1.81
LINC01541-202ENST00000568095 RMI2Q96E14 147 aa3.73□□□□□ -1.81
LINC01541-202ENST00000568095 PLAC8L1A1L4L8 177 aa3.73□□□□□ -1.81
LINC01541-202ENST00000568095 SEC61BP60468 96 aaKnown RBP3.73□□□□□ -1.81
LINC01541-202ENST00000568095 COX17Q14061 63 aa3.73□□□□□ -1.81
LINC01541-202ENST00000568095 DEFB114Q30KQ6 69 aa3.73□□□□□ -1.81
LINC01541-202ENST00000568095 XP32Q5T750 250 aa3.73□□□□□ -1.81
LINC01541-202ENST00000568095 Q6ZVQ6 151 aa3.73□□□□□ -1.81
LINC01541-202ENST00000568095 PRR26Q8N8Z3 221 aa3.73□□□□□ -1.81
LINC01541-202ENST00000568095 SPATA3Q8NHX4 192 aa3.73□□□□□ -1.81
LINC01541-202ENST00000568095 TRGV1A0A0A0MS02 117 aa3.72□□□□□ -1.81
LINC01541-202ENST00000568095 F8WEM9 126 aa3.72□□□□□ -1.81
LINC01541-202ENST00000568095 TOMM7Q9P0U1 55 aa3.72□□□□□ -1.81
LINC01541-202ENST00000568095 DNAH1Q9P2D7 4330 aa3.72□□□□□ -1.81
LINC01541-202ENST00000568095 IGHV4-28A0A0C4DH34 117 aa3.72□□□□□ -1.81
LINC01541-202ENST00000568095 H3BQ85 93 aa3.72□□□□□ -1.81
LINC01541-202ENST00000568095 M0R2N4 97 aa3.72□□□□□ -1.81
LINC01541-202ENST00000568095 PDE6GP18545 87 aa3.72□□□□□ -1.81
LINC01541-202ENST00000568095 RBM3P98179 157 aaKnown RBP3.72□□□□□ -1.81
LINC01541-202ENST00000568095 NOTCH2Q04721 2471 aa3.72□□□□□ -1.81
LINC01541-202ENST00000568095 LINC00959A0A1B0GUT2 108 aa3.71□□□□□ -1.82
LINC01541-202ENST00000568095 IGLV1-51P01701 117 aa3.71□□□□□ -1.82
LINC01541-202ENST00000568095 DNHD1Q96M86 4753 aa3.71□□□□□ -1.82
LINC01541-202ENST00000568095 TRBV6-8A0A0A6YYG3 113 aa3.71□□□□□ -1.82
LINC01541-202ENST00000568095 LINC00474Q9P2X8 69 aa3.71□□□□□ -1.82
LINC01541-202ENST00000568095 PKD1L1Q8TDX9 2849 aa3.7□□□□□ -1.82
LINC01541-202ENST00000568095 KIAA0087Q14695 138 aa3.7□□□□□ -1.82
LINC01541-202ENST00000568095 KRTAP24-1Q3LI83 254 aa3.7□□□□□ -1.82
LINC01541-202ENST00000568095 ODF3L2Q3SX64 289 aa3.7□□□□□ -1.82
LINC01541-202ENST00000568095 Q8NDZ9 215 aa3.7□□□□□ -1.82
LINC01541-202ENST00000568095 SNURFQ9Y675 71 aa3.7□□□□□ -1.82
LINC01541-202ENST00000568095 LOC100131303A0A0U1RQF7 123 aa3.7□□□□□ -1.82
LINC01541-202ENST00000568095 MIFP14174 115 aa3.7□□□□□ -1.82
LINC01541-202ENST00000568095 PRR3P79522 188 aaKnown RBP3.7□□□□□ -1.82
LINC01541-202ENST00000568095 TM2D3Q9BRN9 247 aa3.7□□□□□ -1.82
LINC01541-202ENST00000568095 A0A1B0GUV1 79 aa3.69□□□□□ -1.82
LINC01541-202ENST00000568095 GIG44P09565 113 aaPredicted RBP3.69□□□□□ -1.82
LINC01541-202ENST00000568095 Q8N3U1 123 aa3.69□□□□□ -1.82
LINC01541-202ENST00000568095 C6orf99Q4VX62 202 aa3.69□□□□□ -1.82
LINC01541-202ENST00000568095 MUC7Q8TAX7 377 aa3.69□□□□□ -1.82
LINC01541-202ENST00000568095 PRKDCP78527 4128 aaKnown RBP3.69□□□□□ -1.82
LINC01541-202ENST00000568095 IGLV6-57P01721 117 aa3.68□□□□□ -1.82
LINC01541-202ENST00000568095 FAM229BQ4G0N7 80 aa3.68□□□□□ -1.82
LINC01541-202ENST00000568095 Q6ZTC4 211 aa3.68□□□□□ -1.82
LINC01541-202ENST00000568095 MAST4O15021 2626 aa3.68□□□□□ -1.82
LINC01541-202ENST00000568095 TMEM254Q8TBM7 123 aa3.68□□□□□ -1.82
LINC01541-202ENST00000568095 C16orf74Q96GX8 76 aa3.68□□□□□ -1.82
LINC01541-202ENST00000568095 NREPQ16612 68 aa3.68□□□□□ -1.82
LINC01541-202ENST00000568095 OCR1Q9BZK8 76 aa3.68□□□□□ -1.82
LINC01541-202ENST00000568095 NOP10Q9NPE3 64 aaKnown RBP3.68□□□□□ -1.82
LINC01541-202ENST00000568095 CELA1Q9UNI1 258 aa3.67□□□□□ -1.82
LINC01541-202ENST00000568095 ATRQ13535 2644 aa3.67□□□□□ -1.82
LINC01541-202ENST00000568095 SETD2Q9BYW2 2564 aaPredicted RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms