RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 LINC00158P58513 81 aa15.24■□□□□ 0.03
FANCA-228ENST00000567943 PMCHL2Q9BQD1 86 aa15.24■□□□□ 0.03
FANCA-228ENST00000567943 H0Y9J4 135 aa15.23■□□□□ 0.03
FANCA-228ENST00000567943 PLNP26678 52 aa15.23■□□□□ 0.03
FANCA-228ENST00000567943 A0A0U1RRA0 63 aa15.22■□□□□ 0.03
FANCA-228ENST00000567943 DPM2O94777 84 aa15.22■□□□□ 0.03
FANCA-228ENST00000567943 MAP1LC3CQ9BXW4 147 aa15.22■□□□□ 0.03
FANCA-228ENST00000567943 VPREB1P12018 145 aa15.2■□□□□ 0.02
FANCA-228ENST00000567943 NDUFA12Q9UI09 145 aa15.2■□□□□ 0.02
FANCA-228ENST00000567943 LRP2P98164 4655 aa15.2■□□□□ 0.02
FANCA-228ENST00000567943 MEIG1Q5JSS6 88 aa15.19■□□□□ 0.02
FANCA-228ENST00000567943 ZNF861PO60384 105 aa15.18■□□□□ 0.02
FANCA-228ENST00000567943 IGKCP01834 107 aa15.18■□□□□ 0.02
FANCA-228ENST00000567943 SMIM13P0DJ93 91 aa15.18■□□□□ 0.02
FANCA-228ENST00000567943 HERV-K104P63124 156 aa15.18■□□□□ 0.02
FANCA-228ENST00000567943 RPL24P83731 157 aaKnown RBP15.18■□□□□ 0.02
FANCA-228ENST00000567943 LEPROTO15243 131 aa15.17■□□□□ 0.02
FANCA-228ENST00000567943 BCE1O60756 84 aa15.17■□□□□ 0.02
FANCA-228ENST00000567943 TSPEAR-AS2P59090 65 aa15.17■□□□□ 0.02
FANCA-228ENST00000567943 Q8NDZ9 215 aa15.16■□□□□ 0.02
FANCA-228ENST00000567943 PLEKHB2Q96CS7 222 aa15.16■□□□□ 0.02
FANCA-228ENST00000567943 IGKV2-28A0A075B6P5 120 aa15.15■□□□□ 0.02
FANCA-228ENST00000567943 MYMXA0A1B0GTQ4 84 aa15.15■□□□□ 0.02
FANCA-228ENST00000567943 ATP6V1G1O75348 118 aa15.15■□□□□ 0.02
FANCA-228ENST00000567943 IGKV2D-28P01615 120 aa15.15■□□□□ 0.02
FANCA-228ENST00000567943 KRTAP1-4P0C5Y4 121 aa15.15■□□□□ 0.02
FANCA-228ENST00000567943 HERVK_113P61574 105 aa15.15■□□□□ 0.02
FANCA-228ENST00000567943 PRR26Q8N8Z3 221 aa15.13■□□□□ 0.01
FANCA-228ENST00000567943 SYS1-DBNDD2H3BUS1 97 aa15.12■□□□□ 0.01
FANCA-228ENST00000567943 J3QQQ9 107 aa15.12■□□□□ 0.01
FANCA-228ENST00000567943 RPL28P46779 137 aaKnown RBP15.12■□□□□ 0.01
FANCA-228ENST00000567943 MIR7-3HGQ8N6C7 128 aa15.12■□□□□ 0.01
FANCA-228ENST00000567943 LINC00587B1AMM8 73 aa15.11■□□□□ 0.01
FANCA-228ENST00000567943 IGLV1-50A0A075B6I6 118 aa15.1■□□□□ 0.01
FANCA-228ENST00000567943 LGALS3P17931 250 aaKnown RBP15.08■□□□□ 0
FANCA-228ENST00000567943 COA6Q5JTJ3 125 aaKnown RBP15.08■□□□□ 0
FANCA-228ENST00000567943 BOD1L2Q8IYS8 172 aa15.07■□□□□ 0
FANCA-228ENST00000567943 UBE2AP49459 152 aa15.06■□□□□ 0
FANCA-228ENST00000567943 TMEM238C9JI98 176 aa15.05■□□□□ -0
FANCA-228ENST00000567943 NMUP48645 174 aa15.05■□□□□ -0
FANCA-228ENST00000567943 LINC01545Q5VT33 79 aa15.04■□□□□ -0
FANCA-228ENST00000567943 PET117Q6UWS5 81 aa15.04■□□□□ -0
FANCA-228ENST00000567943 TMEM126AQ9H061 195 aa15.04■□□□□ -0
FANCA-228ENST00000567943 E9PLD3 99 aa15.03■□□□□ -0
FANCA-228ENST00000567943 M0R378 163 aa15.03■□□□□ -0
FANCA-228ENST00000567943 KRTAP13-1Q8IUC0 172 aa15.03■□□□□ -0
FANCA-228ENST00000567943 DAND5Q8N907 189 aa15.03■□□□□ -0
FANCA-228ENST00000567943 S100A1P23297 94 aa15.02■□□□□ -0
FANCA-228ENST00000567943 C3orf79P0CE67 100 aa15.01□□□□□ -0.01
FANCA-228ENST00000567943 NCR3O14931 201 aa15□□□□□ -0.01
FANCA-228ENST00000567943 PRLHP81277 87 aa15□□□□□ -0.01
FANCA-228ENST00000567943 FAM19A1Q7Z5A9 133 aa15□□□□□ -0.01
FANCA-228ENST00000567943 KRTDAPP60985 99 aa14.99□□□□□ -0.01
FANCA-228ENST00000567943 LPAP08519 4548 aa14.99□□□□□ -0.01
FANCA-228ENST00000567943 RPL13AP40429 203 aaKnown RBP14.96□□□□□ -0.01
FANCA-228ENST00000567943 IGKV2D-26A0A0A0MRZ7 120 aa14.95□□□□□ -0.02
FANCA-228ENST00000567943 LOC107984156A0A0G2JMH3 177 aa14.95□□□□□ -0.02
FANCA-228ENST00000567943 A0A0J9YXY3 114 aa14.95□□□□□ -0.02
FANCA-228ENST00000567943 ARL17AQ8IVW1 177 aa14.95□□□□□ -0.02
FANCA-228ENST00000567943 MIEN1Q9BRT3 115 aa14.93□□□□□ -0.02
FANCA-228ENST00000567943 RNF213Q63HN8 5207 aa14.92□□□□□ -0.02
FANCA-228ENST00000567943 A0A087X002 238 aa14.9□□□□□ -0.02
FANCA-228ENST00000567943 TRBV10-3A0A0K0K1G6 114 aa14.9□□□□□ -0.02
FANCA-228ENST00000567943 PRYO14603 147 aa14.9□□□□□ -0.02
FANCA-228ENST00000567943 ADAMTSL4-AS1Q5T5F5 129 aa14.9□□□□□ -0.02
FANCA-228ENST00000567943 ANAPC11Q9NYG5 84 aa14.9□□□□□ -0.02
FANCA-228ENST00000567943 C20orf202A1L168 122 aa14.89□□□□□ -0.03
FANCA-228ENST00000567943 NPC2P61916 151 aa14.89□□□□□ -0.03
FANCA-228ENST00000567943 CRYGAP11844 174 aa14.88□□□□□ -0.03
FANCA-228ENST00000567943 KCNQ1DNQ9H478 68 aa14.88□□□□□ -0.03
FANCA-228ENST00000567943 SOSTDC1Q6X4U4 206 aa14.87□□□□□ -0.03
FANCA-228ENST00000567943 HIGD2AQ9BW72 106 aa14.87□□□□□ -0.03
FANCA-228ENST00000567943 TRBV10-2A0A0K0K1G8 114 aa14.86□□□□□ -0.03
FANCA-228ENST00000567943 ZNF815PA8K554 130 aa14.86□□□□□ -0.03
FANCA-228ENST00000567943 TTTY13Q9BZ97 58 aa14.86□□□□□ -0.03
FANCA-228ENST00000567943 SPANXB1Q9NS25 103 aaPredicted RBP14.86□□□□□ -0.03
FANCA-228ENST00000567943 EIF4EBP3O60516 100 aaPredicted RBP14.85□□□□□ -0.03
FANCA-228ENST00000567943 SPRR1AP35321 89 aa14.85□□□□□ -0.03
FANCA-228ENST00000567943 NDUFC2O95298 119 aa14.84□□□□□ -0.03
FANCA-228ENST00000567943 DDTP30046 118 aa14.84□□□□□ -0.03
FANCA-228ENST00000567943 LINC00337Q8N6G1 96 aa14.84□□□□□ -0.03
FANCA-228ENST00000567943 S100A12P80511 92 aa14.83□□□□□ -0.04
FANCA-228ENST00000567943 ATOH7Q8N100 152 aa14.83□□□□□ -0.04
FANCA-228ENST00000567943 LITAFQ99732 161 aa14.83□□□□□ -0.04
FANCA-228ENST00000567943 ETDCA0A1B0GVM5 59 aa14.82□□□□□ -0.04
FANCA-228ENST00000567943 TYMSOSQ8TAI1 123 aa14.82□□□□□ -0.04
FANCA-228ENST00000567943 TIMM17BO60830 172 aa14.81□□□□□ -0.04
FANCA-228ENST00000567943 FAM229BQ4G0N7 80 aa14.81□□□□□ -0.04
FANCA-228ENST00000567943 HIST3H2BBQ8N257 126 aa14.81□□□□□ -0.04
FANCA-228ENST00000567943 KRTAP4-16G5E9R7 235 aaPredicted RBP14.8□□□□□ -0.04
FANCA-228ENST00000567943 ANKRD39Q53RE8 183 aa14.8□□□□□ -0.04
FANCA-228ENST00000567943 S100A2P29034 98 aa14.79□□□□□ -0.04
FANCA-228ENST00000567943 KRTAP13-2Q52LG2 175 aa14.79□□□□□ -0.04
FANCA-228ENST00000567943 S100A7L2Q5SY68 101 aa14.79□□□□□ -0.04
FANCA-228ENST00000567943 LINC00308Q8TCZ7 52 aa14.79□□□□□ -0.04
FANCA-228ENST00000567943 HIST1H2BLQ99880 126 aa14.78□□□□□ -0.04
FANCA-228ENST00000567943 IGLV6-57P01721 117 aa14.77□□□□□ -0.05
FANCA-228ENST00000567943 S100A6P06703 90 aa14.76□□□□□ -0.05
FANCA-228ENST00000567943 AKR1D1P51857 326 aa14.76□□□□□ -0.05
FANCA-228ENST00000567943 SMCR5Q8TEV8 140 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms